Chiloscyllium punctatum (brownbanded bambooshark): 140484643
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Entry
140484643 CDS
T11285
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
140484643 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpun03036
]
140484643 (ercc6)
03400 DNA repair and recombination proteins [BR:
cpun03400
]
140484643 (ercc6)
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
140484643 (ercc6)
DNA repair and recombination proteins [BR:
cpun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
140484643 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
DEAD
Spt5-NGN
Motif
Other DBs
NCBI-GeneID:
140484643
NCBI-ProteinID:
XP_072439301
LinkDB
All DBs
Position
13:complement(90935105..90991715)
Genome browser
AA seq
1522 aa
AA seq
DB search
MLFVCSKFLTKSIHSISPMNRLYKMPTAGDPAADDSAGCHRPGVADSEAHFISAAPQTLQ
DNGFLASYLDAPADCDTSDSRPSTSTAFQPADIRSTQKIVQIDRQQIQAVDQSAQALELQ
GLGVDVYDQDVLEQGVLQQVDRAISEASQAAKRADAEKEYCSVLDDLRSTTICLKQTNKI
IEQLTPHAATNKEVRRKLESVKRQKDNKERQLKKIKAKQKHLQAVLSGADIQKLEAEYES
CDEEPGPSSLGSMLMPAQETEWEHLIRTGQMTPFGTKIPQKETKKEPRKIMLNDASDFEK
YLADQAKMAAIRRKSFTKRAKRRKAAVSVQAETETSDGKTQNPKGGPKKNSTVSRTDRKL
KKQLQKLQRKTLEIKFKAGAPTKKNSLQELVGGREDRGSESEESLYVPDEELLYPDEFGN
SDDEVSDNGTFKKAPKKRQKQSHSDEAFSPSSGEDESRRRIRAHKDDGNEELYRKRLRKW
KRKRLLEKAEQQANGEGAESDESDAEFDEGFKVPGFFWRKLYKYQQTGVRWLWELHCQQA
GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRYEGLGPVVIVCPATVMHQWVKEFH
TWWPPFRVAVLHETGSFTSRKERLIREIAACNGILITSYSYVRIMQESIAHYNWHYVILD
EGHKIRNPNAAITVACKQFRTPHRIILSGSPMQNNLKELWSLFDFIFPGKLGTLQVFMEQ
FSVPITMGGYQNASPVQVQTAYKCACVLRDTINPYLLRRIKADVKMNLALPDKNEQVLFC
RLTEEQREVYQNFIDSKEVYQILNREMQVFSGLIALRKICNHPDLFSGGPKILKGVPDEQ
LTEEEHFGYWKRSGKMIVVDALLKLWYKQGHRVLLFSQSRQMLDILEVFIRNLGYSYLKM
DGTTSVGSRQTLISRYNENSSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQAR
ERAWRIGQKKQVTIYRLLTAGSIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLTELF
TLSSPDGTQGTETSAIFAGTGSDVYAPTRKKTGKSSSSFRKRNVMLSGQDSSKQVKLPPD
LSLQCHSDKSQSGKLSVNPQNELKENSVFGSDGTVTQVKQEIKSAEFPTVSQSEYRRLDQ
PTNSAHKETDNNNVESALSNKAGLLDHGHTPGQIILNEERKDCTQNSEKLQNISSADLEE
TGNSHELHHKHQSKTKHQITKSEHDDALSEYKRKHKKHKRHKDAYFEGERIPHLVKRQKI
KKRDHEEEQKEKEVCRQSDDYVLEKLFKKSGIHSVMKHDVIMESSNPDYVLVEAEANRVA
QEALKALKASRQRCLGVSSGVPSRINSSQLSGTAAAVKPRFGQKKNPLLPTSSPSSKSTP
EKCKDAAVIEKDEAAKSHFSGVPSEEEAGRVLPSSSSLLAKMRARNHLTLSQSLEIDESS
EPAAVPPPVPTEHDELLVEMRNFIAFQASTDGQATTTELLQEFQSKLSPAQTAVFRELLR
NLCTFHRNASGDGIWTLKLEFR
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgttatttgtgtgctcaaaatttttaactaaatccattcactctatctctccaatgaac
agattgtataaaatgccgaccgcaggagatcctgcagctgatgattcagcaggttgccac
agaccaggtgtggctgattctgaagctcacttcatttcggcggctccccagactcttcaa
gataatggattcttggctagttatctagatgctcctgctgactgtgatacctcggatagc
agaccatccacttccactgccttccagcctgccgacataaggagcactcagaaaatcgtc
cagattgatcggcagcagatccaagccgtggaccagagtgcccaggctctggagctgcaa
ggtctcggagtcgatgtctatgaccaggatgtattggagcagggagttctccagcaagtg
gacagagcgattagtgaagccagtcaagccgccaaaagagcagatgcagagaaagagtac
tgttctgttttagatgatctgaggtccaccaccatctgtctgaagcaaacaaataagatc
attgagcagttgactcctcatgctgctacaaacaaggaagtaaggagaaagctggagtct
gtgaaaaggcagaaggataacaaggaaagacagttgaaaaagataaaggctaaacagaaa
cacctccaggcagtgctcagtggtgctgacattcagaagcttgaagctgaatacgaatcg
tgcgatgaagaaccaggtccttcgtcgttaggaagtatgttaatgccggcacaggaaaca
gaatgggagcatctcatccgcaccggacagatgacacccttcggcactaaaatacctcag
aaagaaacaaaaaaggagcctcgcaagatcatgttgaatgatgcatcagactttgagaag
tatctggccgatcaggcaaagatggctgcaattcggaggaagtccttcacaaaaagagcc
aagaggagaaaagcagcagtttctgtgcaggccgaaactgagacatcagatggcaaaact
caaaatccaaaaggtggccccaagaaaaatagcactgtgtcaagaacagaccgcaaactg
aaaaagcaattgcagaaactgcagcgcaagactcttgagattaaatttaaagctggagct
ccaaccaagaagaactccctgcaagagttggtgggagggcgagaagacagaggctcagag
agtgaagagtcactctatgttcctgatgaggagttactttatccagatgaatttggtaac
agtgatgatgaagtgtccgacaatggcacatttaagaaagcaccaaagaaaagacaaaag
cagagtcactcggatgaagctttctcaccaagctcaggcgaagatgaatcgagacgcaga
ataagagcacacaaggatgatggaaatgaagagctgtacaggaaaagattgaggaagtgg
aaaaggaagaggctgctggaaaaggcagagcagcaagctaatggcgaaggtgcagagtct
gacgaaagcgatgccgaatttgatgaggggttcaaggtgcctggcttcttttggagaaag
ctatacaagtatcagcagacaggtgttcgttggctttgggaattacactgccaacaggca
ggaggaattttgggggatgaaatgggactgggcaagaccattcagataattgccttcttg
gcaggcctgagctacagcaagataaggacacgaggctcaaattacagatatgagggcttg
ggtcctgtggtcattgtttgcccagcaactgtgatgcaccagtgggtgaaagaattccac
acgtggtggccaccattcagagtagcagtcctgcatgagacgggctccttcaccagcagg
aaggagaggctcattcgagaaattgcggcatgtaatggtattctgatcacctcgtattcc
tacgtccgaattatgcaggagtccattgcacactataactggcattatgtaattttggat
gaagggcacaagatacgaaatccaaacgcagcaatcactgtcgcgtgtaaacagtttcgt
actccacatcgtattatcctgtctggttcgccaatgcagaataacttgaaggagctctgg
tctttatttgacttcatttttccaggaaagctaggaacattgcaagtcttcatggaacaa
ttttctgtccctattacaatgggaggctatcaaaacgcctcacctgttcaggtgcaaact
gcctataagtgtgcttgtgttttacgggacaccataaatccatacttgttgcgacgaatt
aaagccgatgtaaaaatgaatctggcattgccagacaagaatgaacaggttctattttgt
cgcttaacagaagaacaacgtgaagtctaccaaaactttatagattccaaggaagtctat
cagattctcaacagagaaatgcaggtattctctggcctgatagctctcagaaagatctgt
aatcaccccgacctgttttctggtggccccaagattctgaagggggtgcctgatgagcag
ctgacagaagaagagcactttgggtattggaaacgatctggaaagatgattgtagtcgat
gctttgctaaagctgtggtacaaacaaggacatcgagtacttcttttctctcaatcccga
cagatgttggacatcttggaggtgttcatacggaatctgggctattcatatcttaaaatg
gatggaacaacttcagtgggttctagacagacactcatttccagatacaatgagaattcc
tctatatttgtcttcctcctcacaactagagttggtggtttgggagtaaacttgacagga
gcaaaccgagttattatctacgaccctgactggaacccgagtactgacacacaggcccga
gagcgtgcttggaggataggtcaaaagaaacaggttacaatttacaggttactaacagcc
ggatcaattgaagaaaaaatctaccaccggcaaattttcaagcagttcctgactaatcga
gtattgaaggacccaaagcagagacggtttttcaaatctaatgatcttacagagcttttc
acgttaagcagtccagatggtactcagggaacagaaacaagtgcaatttttgcaggcaca
ggttcggatgtttacgctcctaccagaaaaaaaactgggaaaagctccagttcattcagg
aagagaaatgtcatgctatcaggtcaggattccagcaagcaagtcaagttaccaccggat
ttgtctctccaatgccattcagacaaaagtcagtcaggaaaactttctgttaacccacag
aatgaattaaaagagaatagtgtttttggcagtgatgggactgttactcaggtaaaacaa
gaaataaaaagtgctgaatttccaactgtttcacagtctgaatatcgaaggcttgatcaa
ccaaccaattctgcacataaggaaactgacaacaataacgtagaatctgcactcagcaat
aaagctggactacttgatcatggccacacaccgggacaaatcattctaaatgaggagagg
aaagattgcactcagaattcagaaaaactgcaaaatataagtagtgctgacttagaagaa
actggcaacagccatgaacttcatcataaacaccaatctaaaacaaaacatcaaataact
aagagtgagcatgatgatgctctttcagagtacaagcgcaaacacaaaaaacacaaacgc
cacaaagatgcatattttgaaggcgagcgtatcccccatttggtaaaaaggcagaaaatc
aaaaagagggatcatgaggaagagcagaaagaaaaggaagtctgcaggcagagtgatgat
tacgtcttggaaaagctgttcaaaaaatctggaatccacagtgtgatgaagcatgatgtt
attatggagtcatccaatcctgattatgtattagttgaagcagaagctaatcgagttgct
caggaggctttgaaagcattgaaggcttcgagacagcgttgcctgggtgtctcttctggt
gtgccatccaggatcaatagcagtcagctgtcaggaacagcagctgctgtaaagccaaga
tttggtcagaagaaaaatccactgcttccaactagcagtccttcttccaaatccactcca
gaaaaatgcaaggatgctgctgtaattgaaaaggacgaagctgccaaatctcacttcagt
ggcgttccatcagaagaagaggcaggtcgtgtgctcccgtcctcttcctcgttactggcc
aaaatgcgagcaaggaatcatttgactttgtctcaaagccttgaaattgatgagagctct
gagcctgcagcagtgcccccgcctgtaccaaccgagcacgatgaactattggtggaaatg
aggaacttcattgcattccaggctagcactgatgggcaagccacaactactgagttgtta
caagagtttcagtccaagttatcacctgcacagacagctgttttccgagaacttcttaga
aacttgtgcactttccacagaaacgcatctggggatgggatctggacactgaaactagaa
ttccgatga
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