Chiloscyllium punctatum (brownbanded bambooshark): 140484710
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Entry
140484710 CDS
T11285
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03020
RNA polymerase
cpun04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
140484710 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
140484710 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpun03021
]
140484710 (polr3a)
Enzymes [BR:
cpun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
140484710 (polr3a)
Transcription machinery [BR:
cpun03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
140484710 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
140484710
NCBI-ProteinID:
XP_072439532
LinkDB
All DBs
Position
13:99990154..100042288
Genome browser
AA seq
1390 aa
AA seq
DB search
MGKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDNSHTPLTHGVLDHRM
GTSEKDRPCETCGKNLADCIGHYGYIDLELPCFHVGYFKAIIGILQMICKVCSHILLSQE
EKKLFLDTLKRPGLTYLQKRGLKKKVSEKCRKRTFCLYCGSFNGPVKKCGLLKIIHEKYK
TNKKVMDPVVSDFLQSFDIAIEHNKEVEALLGRAQENLNPLVVLNMFKRIPSEDIPLLLM
NLEAGKPADLVLTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSSRTVISPDPNLRIDEVAVPVHVAKILTYPERVTKANLEFMRKLVRNGPEVHPGANF
IQQRHTNLKRFLRYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHIAKV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTRKDTFFDRAKACQIVASILSGKDERIKISLPPPAILKPVTLWTGKQI
FSLILKPSKDCPIKANLRTKGKQYCGKGEDLCYNDSFVVIQNSELMSGSLDKGTLGSGSK
NNIFYILLRDWGQMAAADAMSRLARLAPVYLSNRGFSIGIGDVTPGKGLLKAKQELLDAG
YKKCDEFIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFIFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCTQYDLTVRSSTGDVIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAIYPCHSEPALSKSEVIAAAEAIMKRSEFLC
CQNEYLQAIKNFIKDFSEKIKKTRDKYGINDNGTTEPRVLYQLNRITPTQVDKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKSI
STPIITAHLDQDDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVKYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQYLKEELPKIV
VQGIPEVSRAVIHIDEQGGKEKYKLLVEGDNLRAVMATHGVKGTHTTSNNTYEVEKTLGI
EGARSTIIHEIQYTMKNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKDPDPPKRPLIFD
NNEFHIPIVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaacagttcagggagacggatgtggctaagaaaataagccacatatgtttt
gggatgaagtctgcagagcagatgaggcagcaagcgcatatccaagtggtcagcaagaac
ctgtatagtcaagataacagtcatactcctttgacccatggtgtactagatcatcgcatg
ggaaccagtgagaaggatcgtccgtgtgaaacatgtgggaagaatctagctgattgcatt
ggacattatggatacattgacttggagctgccatgtttccatgttggttattttaaagct
attattggcatcttgcagatgatctgtaaagtatgctctcacatcctgctgtctcaagaa
gaaaagaaactatttctcgatactttaaaaagacctggtttaacctatcttcagaaacga
ggcctaaagaaaaaagtttctgagaaatgcaggaaaaggaccttttgtctatattgtgga
tccttcaatggtcctgtgaaaaaatgtggcttattgaaaattattcatgaaaaatacaag
acaaataagaaagtgatggatcctgtggtatcagattttctacagtcttttgatattgcc
atagaacacaacaaagaagtggaggcgttgcttggaagagctcaggagaatctaaatcct
cttgtggtgttaaatatgtttaaaagaattccctcagaagacatcccactgctgcttatg
aacctggaagcaggaaaacctgcagacctagtccttactcgattactcgttcctccactt
tgtatcagaccttcagtggtcagtgatcttaaatcgggaactaatgaggatgacttaaca
atgaagctgacagaaatcatcttcttaaacgatgtaattaaaaagcatcgaatgtctgga
gcaaaaactcaaatgatcatggaagattgggatttcctacaattacagtgtgcgctttac
atcaatagtgaactttctggaattcctctcaacatggcacccaagaagtggaccaggggg
tttgtacaaaggctgaaaggaaaacaaggtcgatttcgaggaaacttgtctggtaaaaga
gtggatttttctagcagaactgtaatctctcctgatcctaacttgcgtatagatgaagta
gcagttccagtacatgtggcaaagatcctgacatatcctgaaagggtaacaaaagctaac
ctggaattcatgcggaagcttgtacgtaatggacctgaagtacatccaggggctaatttt
attcaacagcggcacacaaatctgaagagatttctaagatatgggaatagggagaaaatg
gcacaggaactgaaatatggtgatattgtggagcgacatctaattgatggagatgtagtg
ctgttcaatagacaaccgtccctgcacaaactgagcatcatggcccatatagccaaggtg
aaaccccacagaacatttcggttcaatgaatgtgtctgcacaccttataatgcagatttt
gatggtgatgaaatgaatcttcatcttcctcaaactgaggaggccaaggccgaagcactg
gttctaatggggacaaaagccaatttggtaactcctagaaatggggaacctctaattgct
gcaatccaggactttctaacaggtgcctatctgcttaccaggaaggacactttctttgac
agagcaaaagcatgtcagattgttgcctccattctgtcaggcaaagacgagcgaatcaaa
attagtcttccacctcctgcaatcttaaagcctgtgacattgtggacagggaagcaaatt
tttagcctcattcttaagccaagcaaggactgtcctattaaagcaaacctgcgtaccaag
ggcaagcagtactgtggaaaaggcgaagacctctgttacaatgactccttcgttgtaatc
cagaacagtgagctgatgtctggaagcttggataaaggaactctgggatcaggttccaaa
aacaacattttctacatcctgctgagagactggggacagatggcggctgcagacgctatg
tctcgtcttgctcgcctggctcctgtttatctgtccaatcgagggttttctattggcatt
ggtgatgtaacaccaggtaaggggctgctaaaagccaaacaggaactactggatgctggc
tacaagaagtgtgatgaattcattgaagcactcaacacaggcaaacttcaacagcaacct
ggatgcacagcagaagaaacattagaagccttgatccttaaggagctgtctgtgattaga
gaccatgctggcagtgcttgccttagggagctagacaagagtaacagcccccttattatg
gccctctgtggttcaaaaggatccttcatcaacatctcccagatgattgcctgtgtagga
cagcaggccattagtggatcccgtgttcctgatggttttgagaacagatctttgcctcac
tttgaaaagcattctaagcttccagcagcaaaggggtttgtagcagacagtttctattct
ggtttaactccaacagagttcatcttccataccatggctggtcgtgagggcctagtggat
actgctgtaaaaacagcagaaactgggtacatgcagagacgtctggttaaatctttagag
gatctttgcacacagtatgatttaactgttcgcagctcaactggtgacgtcatccagttt
atctatggtggtgatggcttagatccagcagctatggaaggcaaagatgaacctttagaa
tttaagagggttctggataatattcgggccatttacccatgtcacagtgaacctgctttg
agtaagagtgaagtgattgcagctgcagaggcaattatgaagagaagcgaatttctttgt
tgtcaaaatgaatatctgcaggcaatcaaaaattttatcaaggatttttcagagaagatc
aagaaaactagagacaaatatgggattaatgacaatggaactactgagccccgtgtttta
taccagttgaaccgaataactcctacacaagtagacaaatttctagaaacctgtagagac
aagtacatgagagctcagatggagccaggttctgctgttggtgctttgtgtgcacaaagt
ataggagaaccaggcacacagatgaccttgaagactttccactttgctggtgtagcttca
atgaatattactctgggtgtacccagaataaaagaaattattaatgcatcaaaatctata
agcactccaattattacagcacatcttgaccaagatgatgatgctgacttcgctcgactg
gtaaaaggaagaattgaaaagactctgctcggagaaatttcagaatatattgaagaagtt
tttctgcccgatgactgcttcattcttgtcaagctttcccttgaaagaatccgacttctg
agactagaggtgaacgcagaaactgtgaaatactctatttgcacatcaaaactgcgagtc
aaaccaggtgatgttgcagttcatggcgaagctgtcgtgtgtgtcacacctcgagagaat
agcaaaagttcgatgtactacgttcttcagtatctaaaagaagaactgccaaagattgtt
gtccaaggtattccagaagtctccagagcagttattcatattgatgagcaaggtggaaag
gagaagtacaaactactggtggaaggtgacaatttgcgtgcagtcatggcaactcatggc
gtcaaaggaacacatacaacatcaaacaacacttacgaggtagagaagacattgggtatt
gaaggtgctcgatccactatcatccatgagatccaatatacaatgaaaaatcacgggatg
agcattgacagaagacatgttatgcttttgtcagacctgatgacatacaagggcgaagta
ttgggaataacccggtttggcttggcaaaaatgaaagaaagtgtcctcatgttggcctca
tttgagaaaactgcagatcatctctttgatgctgcatactttggacagaaggactcagtc
tgtggtgtgtcagagtgtattattatgggaatcccaatgaacatagggacaggacttttc
aaacttcttcacaaagctgacaaggaccctgacccaccgaagaggccactgatatttgac
aataatgaattccatatcccaattgttacgtag
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