Chiloscyllium punctatum (brownbanded bambooshark): 140484759
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Entry
140484759 CDS
T11285
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpun03021
]
140484759 (chd1)
03036 Chromosome and associated proteins [BR:
cpun03036
]
140484759 (chd1)
Transcription machinery [BR:
cpun03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
140484759 (chd1)
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
140484759 (chd1)
SLIK complex
140484759 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
CHDCT2
DUF1388
Motif
Other DBs
NCBI-GeneID:
140484759
NCBI-ProteinID:
XP_072439681
LinkDB
All DBs
Position
2:complement(63526916..63714880)
Genome browser
AA seq
1791 aa
AA seq
DB search
MEGHGDEDSVSNSSGDSSQSDKESGSSSGSSSDGSSSQSDSNDSSDSDSESDSGSQSDSD
SSGSESNTSSSKGKRTVESKVPKTDGAEFWKSNPSILTVQRSAMIRKQQQLQQQQLSSNS
SEESSSSEDSDDDSSSENTAKHVKRRDEDWQMSGSGSEEEEEEREKSTSGDSESDYQPHN
KVKSRKPQNRIKTKKMKKGKGLKRPADSSDDDDEEHDKRGSRRQATVNVSYKEDEDAKTD
SDDLLEICGEDLPPPAEEEEEFETLERVMESRVGRKGATGATTTTYAVEAEGNPNAGFDP
LREVGEQQYLIKWKGWSHLHNTWESEETLLQQNTKGMKKLENYKKKEEETKRWLKMASPE
DIEYFNCQQELVDDLHRQYQFVERIIAHSNQKSASGHPDYLCKWQGLSYSECSWEDGALI
SRKFQSHIDAYTNRNQSRCIPMKECKVLKQRPRFVTLKKQPSYIGSADVLELRDYQLNGL
NWLAHSWCKNNSVILADEMGLGKTIQTISFLSYVFHEHQLYGPFLLVVPLSTLTSWQREI
EMWAPEMNVVVYLGDISSRNMIRTYEWMHPQTKRLKFNILLTTYEILLKDKSFLGGVNWA
FIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWE
VFEEEHGKGREVGYTSLHRELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAVQKQYYKWI
LTRNYKALSKGCKGSTSGFLNIMMELKKCCNHCYLIKIPEDNNFYNRQEALQHLIRNSGK
LILLDKLLCRLKERGHRVLIFSQMVRMLDILAEYLKCRQFCFQRLDGSIKGELRKQALDH
FNAEGSDDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNI
YRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGSNPTNSTPFNKEELAAIL
KFGAEELFKEPEGEEQEPQEMDIDEILCRAETRENEPGPTTVGEELLSQFKVANFSTMDD
DLEPQRNIKDWDDIIPEAQRRRMEEEERQKELEEIYLLPRMRNCAKQISFNGSEGRRRRR
RSSESDSDSVSEGKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLEAIAR
DAELVDKSEVDLRRLGEMVHNGCIKALRESTGQEKTAARRGKVKGPTFRISGVQVNAKLV
IAHEEELAPLHKSIPPDPEDRKKYTIPCHTKAAHFDVDWNKEDDSNLLIGIYEYGYGSWE
MIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEAQRLAEANSKKRK
PRNKRSKNVKIVKVEEVQSDSSAPSPSGKSSDEEGEIKDDAAGTKSAKKKLRSEKENEEK
LDQEMATKKEVEEKEIKKEPKEMRKDKKEKEEKKETKEKDTKKDMKDKEDKELIYKDKEV
KEEKVIEAKSEMKEKSKKTDVPVHITASSDPVPITEEAEELDQNTFSICKERMRPVKAAL
KQLDRPEKGLSEKEQLEHTRQCLIKIGDHITECLKEYSNPEQIKQWRKNLWIFVSKFTEF
DARKLHKLYKHAIKKRLENSRHNDQHSSSLNIHNAKHTESEKPKENSHHDDSSRDSHSSE
RHHSSHYHDHHRDRHHGDPYRKGDPSRKRPYSSFSNGKDHRDRDHYRSDGRYYSESKHRK
LDHRNREHRSGTEASSKESKSHVDHRSSSEHRSHSDHRSSSEYSGHHKSSRDYRYHSDWP
VDHRPSSSGPRSPLDQKSPYDSRSPLEHRSPLEYSSDHKSTPEHIWNSRKT
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcacggtgacgaggacagcgtcagtaacagcagtggagactccagccaatct
gacaaagaatctggttcaagttctgggagcagcagtgatggaagcagcagtcaatcagat
agcaatgactccagtgactctgatagtgaatctgactctggcagccagtccgattcagat
tcatctggttcagaaagcaacacgtcatcatccaaaggaaaaagaacagttgagagcaaa
gttccaaaaactgatggagcagagttttggaaatccaatccaagtattttaactgtgcag
cgatctgccatgatcagaaagcagcaacaactacaacagcaacagctttcttcaaacagt
tcagaggagtcatcaagtagtgaagattctgatgatgattcatcctctgagaacactgcc
aaacatgtgaaacgcagagatgaagactggcagatgtctgggtctggttctgaggaggag
gaggaagagcgagagaaaagtacctcaggagacagcgagtctgactaccaaccccacaac
aaagtaaaaagcaggaaacctcagaacaggatcaaaacaaaaaaaatgaagaaaggaaag
ggactgaagagaccagctgattcatcagatgacgatgatgaagaacatgataagaggggt
tctcgtcgtcaggcaacagttaatgtcagttacaaggaagatgaggatgctaaaactgat
tctgatgacttacttgaaatctgtggggaggatctcccccctccagccgaggaagaagaa
gaatttgaaacattagagagagtaatggagtcacgagttggacggaaaggagcaactggt
gccactaccactacctatgcagttgaggctgagggtaatcctaatgctgggtttgaccct
ttgagggaggtaggagagcaacagtacctgattaaatggaagggctggtcccacctccac
aacacctgggaaagcgaggaaacacttttacagcagaatacaaaaggaatgaaaaaatta
gagaactacaaaaaaaaggaagaggaaaccaaacgatggttaaaaatggcatctcctgaa
gatatagaatacttcaactgtcaacaggaattagttgatgacttgcatcggcaatatcaa
tttgtggaacgcataattgcacattcgaaccagaaatctgcttcagggcatccagactac
ctgtgcaaatggcaaggcctttcatactctgagtgtagctgggaggatggtgctcttata
tccagaaagtttcagtcacacatcgatgcatatacaaaccgaaatcaatccagatgcatc
cccatgaaggagtgcaaggttttaaagcaaaggccgaggtttgtcacactaaagaagcag
ccaagctatataggaagtgctgatgtgttggaactccgagattatcaattaaatggttta
aattggttggcacactcctggtgcaagaacaatagtgttattcttgctgatgaaatgggt
cttgggaaaaccatacaaaccatctcctttctcagctatgtgttccacgagcaccagctg
tatggcccattcctattagtcgttccgctctcaacgctcacttcctggcaacgagaaatt
gaaatgtgggcgcccgaaatgaacgtcgtagtttacttgggggacatcagtagccgtaat
atgataagaacatatgaatggatgcatcctcagactaaacggttgaaattcaatatatta
ttaacaacgtacgaaatcttgctgaaggacaagtcattcctcggaggtgtaaactgggct
ttcattggagtagatgaagcccatcgtctgaagaatgatgactcactcctgtataaaacc
atgattgacttcaagtcaaatcacaggctactcataactgggactccactccaaaactca
ctcaaagaactctggtccctccttcacttcatcatgccagaaaaattttcttcctgggaa
gtgtttgaagaggaacatggtaaaggaagagaagttggatacaccagccttcatcgagaa
cttgagccattcttgctgcgacgagtgaaaaaagatgttgaaaagtctctacctgctaaa
gttgaacaaatcttgcgagtagagatgagtgcagtccaaaagcaatactataagtggatt
ttaaccaggaattataaagccctgagcaaagggtgtaaaggcagcacttccggctttctc
aatatcatgatggaacttaaaaaatgttgtaaccattgctacctcattaaaattccggaa
gataataatttctataacagacaggaggccttacagcatttgatccgtaatagcgggaag
ctgatactgttggacaagctgctttgtcgactaaaggagcgaggccacagagttcttatc
ttctctcaaatggttcggatgctggatattttagcagaatatttgaaatgccgacagttt
tgtttccagcgactagatggatctattaagggcgagttaaggaagcaagcgctggaccat
ttcaatgcagaaggatcagatgatttctgctttctgctatcaaccagagcaggagggttg
ggtataaacctggcatctgcagacactgtagttattttcgattcagactggaacccacag
aatgatttacaggcacaagcaagagctcacagaattggtcagaaaaagcaggttaatata
tatcggctagttacaaagggaacagtggaagaagaaatcattgaaagagcaaagaaaaag
atggtgctggatcaccttgttatacaacgaatggatacaacagggaaaactgtgctacat
actggctccaatcctacaaattctacaccttttaataaagaagagctggcagctatcctg
aagtttggagctgaggaactttttaaagaaccagaaggagaggaacaagaaccacaggaa
atggatattgatgaaatcctttgtcgtgctgaaactcgtgagaatgaacctgggcctact
actgtgggagaagagctgctatcccagttcaaggtagcaaacttttccacaatggacgat
gaccttgagcctcagcgtaatatcaaggactgggatgacattattccagaagcacaacgg
agaaggatggaagaggaagaacgacagaaagaacttgaagagatctacttgcttcctcga
atgcgtaactgtgccaaacagattagttttaatggcagtgaagggaggcgaagaagaagg
cgttcttcagaatcagatagcgactccgtttctgaagggaaacgtccgaaaaaacgtggg
agaccgcgaacaattccacgtgaaaatattaaaggttttagtgatgctgaaattcgaaga
tttatcaagagctacaagaagtttggcggacctctggaaaggttagaagcaattgcacgc
gatgctgaactggtggataagtcagaggttgatctcaggcggttaggagagatggtgcac
aatggctgtatcaaagctctgcgagagtccacaggccaggagaaaacagctgcaaggcgt
gggaaagtaaaggggccaacattccgaatctcgggtgttcaggtgaacgctaagctagtc
attgctcatgaagaggaactggcacctttgcacaaatccattccaccagatccagaggac
aggaagaagtacactatcccatgtcatactaaagcagctcactttgatgtggattggaat
aaggaagatgactccaatcttttaataggcatctatgaatatggctatggtagctgggaa
atgattaagatggatcctgatctcagtttaacacacaagattttacctgatgacccagat
aagaagcctcaggccaaacaattgcagaccagagctgactacctcatcaaattacttagt
aaagacctggccagaaaggaggcgcaaagacttgctgaggctaattcaaaaaaaaggaag
ccaaggaataaaaggagtaaaaatgtaaaaattgtgaaagtagaagaggttcaaagtgat
tcatcagcaccatcaccttcaggcaaaagttcagatgaagaaggagagatcaaggatgat
gctgcaggaacaaagtctgcaaaaaagaaattgaggtcagaaaaagaaaatgaagagaag
ttagaccaagaaatggcaactaagaaagaagttgaagagaaagaaatcaaaaaagagcca
aaagaaatgagaaaagacaaaaaagaaaaggaggaaaagaaagaaacaaaagaaaaagat
actaaaaaagatatgaaagacaaagaggataaagaacttatttataaagataaagaagtt
aaagaagaaaaggtaattgaagctaagtcagagatgaaggagaagtctaaaaagactgat
gtcccagttcatattacagcaagcagtgatccagttcccatcacagaggaggcagaagaa
cttgatcaaaacacatttagtatttgtaaagaaagaatgagacctgtaaaggcagcatta
aagcagttggacaggcctgaaaaaggcctctcagaaaaggagcaactagaacataccagg
cagtgcctgattaaaattggagaccacatcactgaatgtttgaaagagtactcaaatcca
gaacaaatcaagcaatggcgaaaaaatctctggatctttgtttcaaagttcacagaattt
gatgcaagaaagcttcacaagctatacaaacatgcaatcaagaaacgactggagaactct
cggcataatgatcaacacagtagtagcctcaacatccataatgccaaacacacagaatct
gaaaaacctaaagagaattctcaccatgatgatagcagtagggatagccattcatctgaa
cgacaccactcctcacattatcacgaccaccacagagatcgacatcatggggatccctat
cgaaaaggcgatccctcaagaaagagaccatattcctcatttagcaatggcaaagaccat
cgagacagagatcattaccggtcagatggcaggtactacagtgaaagcaaacacagaaaa
cttgatcacagaaatcgtgaacaccggtctggcacggaggccagttcaaaggagagtaaa
tcacacgtagatcacagatccagctcagagcatcgatcgcattcagatcaccgatccagt
tcagaatactcaggccaccacaaatcctccagggattatagataccactcagactggcca
gtggaccacagaccatctagtagtggaccaaggtcacccttggaccagaagtccccttat
gactccagatcaccattggaacacagatctccccttgagtattcctctgatcacaaaagt
acccctgagcacatctggaacagccgtaaaacataa
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integrated database retrieval system
