Chiloscyllium punctatum (brownbanded bambooshark): 140485535
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Entry
140485535 CDS
T11285
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04010
MAPK signaling pathway
cpun04210
Apoptosis
cpun04218
Cellular senescence
cpun04620
Toll-like receptor signaling pathway
cpun04621
NOD-like receptor signaling pathway
cpun04622
RIG-I-like receptor signaling pathway
cpun04623
Cytosolic DNA-sensing pathway
cpun04625
C-type lectin receptor signaling pathway
cpun04920
Adipocytokine signaling pathway
cpun05132
Salmonella infection
cpun05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
140485535 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
140485535 (nfkb1)
04218 Cellular senescence
140485535 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
140485535 (nfkb1)
04621 NOD-like receptor signaling pathway
140485535 (nfkb1)
04622 RIG-I-like receptor signaling pathway
140485535 (nfkb1)
04623 Cytosolic DNA-sensing pathway
140485535 (nfkb1)
04625 C-type lectin receptor signaling pathway
140485535 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
140485535 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140485535 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
140485535 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpun03000
]
140485535 (nfkb1)
Transcription factors [BR:
cpun03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
140485535 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
Ank_KRIT1
Trnau1ap
Motif
Other DBs
NCBI-GeneID:
140485535
NCBI-ProteinID:
XP_072439838
LinkDB
All DBs
Position
14:complement(2042187..2149905)
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AA seq
954 aa
AA seq
DB search
MMAEEDTYRLGVPDIYGIDDYNALELPNAMFTSPMGPTDSPLQTPDGPYLQILEQPKQRG
FRFRYGCEGPSHGGLPGASSEKNKKSYPTVKICNYVGQAKIVVQLVTYGKDSVHLHAHSL
VGKQCEKGICLVQVGPKEMISTFPNLGILHVTKKNVASTLEQRMTQAYVMGYNNGVVIHP
ELNHRHSEGYGQRELTEREKELIHQASIQQAKEMDLSVVRLMFTALLPDSSCRFTRKLEP
VISDPIYDSKAPNASNLRIVRMDKTAGCVVGGDEVYLLCDKVQKDDIQVRFYEEDENGGI
WEAFGDFGPTDVHRQFAIVFRTPKYRDVDISKPASVFVQLRRKSDNETSEPKPFTYYPLI
KDKEEVQRKRLKLLPNFSDHFGGGAGSGGGGVYGGGGGAGGGSNYFAGFQGYSNYSSYTY
TPGTTNSSAGMKHAASCPTENCDCVETAVSSLPSDQPTAQAVAKSTGTLSNSDSADPTVT
VEEAEANQCFLEKALSLAERHASALLDYSVTGDTKMLLAVQRHLTAVQDQNGDTALHLAI
IHFQSGVVQHLLQVIISLPGQDIINMRNDLYQTPLHLAVVTRQAKVVELLLQAGADMGLL
DCHGNSVLHLAAQQGDVKVLNVLLSKKNKTLLELLHLPNNAGFNVVHLAVLANSLSSLRQ
LIAADVDVDSLEQQAGRTALHLAVEQENISLAGCLLLEGSAEVDATTFDGSTALHVAAGR
GYTKLCALLIAAGADPHIENHEPLNDKTDESVEDDHNNNDDDDEGIFHGTTPLDMAASEE
VYDILNGKPYQPKPAPVAPFPQGDLGQLSIEARLELCKLLEVPEPNLNWMALAQKLGLGI
LINAFKLSHSPAKTLLDNYEVCGGTILEILETLKSMGYSKAIDVLHKAMANSASAEPDRT
SNSPTPTEQPNIVQIDTKSQQCDSVCDSGVETSFRRLSHMSAECYSNNQTSFEL
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgaagaggatacctatcgtcttggagtccctgatatttatggtatcgatgat
tataatgctttagaattacccaacgccatgtttacttcgccaatgggtcccacagattct
ccactgcagacacctgatggaccatacctacagattctagaacaacccaaacagagggga
tttcgtttccgttatggatgcgagggaccatcccatggaggattacctggtgcatcgagt
gagaaaaataagaaatcctaccctactgtgaagatatgcaactacgttggacaagcaaag
attgttgttcagttggtgacctatgggaaggatagtgtgcatctccatgctcacagtctc
gttggcaaacagtgtgaaaaaggaatatgtttagttcaagtgggtccaaaggaaatgatt
tcaacatttccgaatctcggtattctacatgtgacaaagaagaatgttgccagtacactc
gagcagagaatgacacaggcttatgtgatgggttataataatggagttgtaattcaccca
gaattaaaccatcgacacagtgagggttacggtcaaagggaactcacagaacgtgaaaag
gagttaatccatcaggcttccattcagcaagcgaaggaaatggacctgagtgttgtgcgc
ctcatgtttacagccctgcttccagacagcagctgtcgatttacacgtaaattggagcct
gttatttctgatcccatctacgacagcaaggcaccaaatgcatcaaatttgaggattgtc
agaatggataagactgctggatgtgtagttggaggagatgaggtttacctactatgtgat
aaagttcaaaaagatgatatccaggttcgattctatgaagaggatgaaaacggtggaatt
tgggaagcatttggggattttggcccaacagatgttcaccggcagtttgctatagttttt
agaacgccaaagtaccgggacgtggacatttccaaacctgcgtctgtgtttgtacagctt
cgtagaaaatctgacaatgaaacaagtgaaccaaagccgttcacctactacccactgatt
aaagacaaggaggaggtacaaaggaaacgattgaaacttttacccaatttctctgaccat
tttggaggtggagcaggttcaggaggaggtggagtttatggaggaggtggtggagcaggg
gggggttccaattactttgctggatttcaaggatattccaactacagtagttacacatac
acgcctgggacaacaaactccagtgctggaatgaaacacgctgccagttgtccgactgag
aattgcgattgtgtagaaacagctgtgagctccttacccagtgaccagccaacagcccag
gctgtagctaaatccaccgggaccctcagtaactcagattctgcagatccaacagttact
gtcgaagaagctgaagcaaatcagtgcttcctcgaaaaagccctaagccttgctgaaaga
catgccagtgccttgttggactattctgtaactggtgataccaagatgctgcttgctgtt
cagcgccaccttactgcagttcaggaccaaaatggagatacagctttacatcttgcaatt
attcatttccaatctggagtggttcaacatcttttgcaagttattatcagccttcccgga
caagatatcatcaacatgaggaacgatctttatcagacaccattgcacctggcagttgtt
acaagacaggccaaggtggtggagttattgcttcaagctggagctgatatgggtctcctg
gattgccatgggaactctgttctacacctggcagcacagcagggagatgtgaaggtgctc
aatgtcctcctaagcaaaaagaacaagactctactagaactcctccatttgccaaataat
gcaggtttcaatgttgtccacctggctgtgttagcgaatagtctgtcatcactgaggcag
ctgattgcagccgatgttgatgtggattctctggagcagcaagcaggtcgcactgctctc
catctcgcagtcgaacaggaaaacatctccttggctggctgtctcctcctggagggcagt
gcagaagttgatgccaccacatttgatgggtctacagcacttcatgtagcagcaggaaga
ggctataccaaactctgtgccttactaatagcagcaggtgcagatccacacattgagaat
catgagccactaaatgacaaaactgatgaatctgttgaagatgatcataataataatgat
gatgatgatgaaggaatctttcatggtaccacaccgttagatatggcagcctcagaagag
gtctatgatatcctaaatggtaaaccataccagccgaaacctgcaccagtagctcctttc
ccacaaggtgacttaggtcagttgagtatagaagcaaggctggagctgtgtaaactgctg
gaggtacctgaacccaatctgaactggatggctctcgctcagaaactgggtcttggaatt
ttaatcaatgcctttaaactcagccattccccagcaaaaacactgctggataactatgag
gtatgtggtggcactatcctggagattctggaaacactgaagtccatgggctacagcaaa
gcaattgatgttcttcacaaagcaatggctaactcagcaagtgcagaaccagacagaaca
agtaactcaccaacacccactgaacaacccaacattgttcagattgatacaaaatcccag
cagtgtgacagtgtgtgtgacagtggagtggagacgtcatttaggagactaagtcacatg
tcagcagaatgttacagcaacaaccagacttcttttgaattgtga
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