Chiloscyllium punctatum (brownbanded bambooshark): 140485623
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Entry
140485623 CDS
T11285
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140485623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpun03021
]
140485623
03036 Chromosome and associated proteins [BR:
cpun03036
]
140485623
Transcription machinery [BR:
cpun03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
140485623
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
140485623
RSF complex
140485623
WICH complex
140485623
B-WICH complex
140485623
NORC complex
140485623
BRF complex
140485623
NuRF complex (fruit fly)
140485623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
140485623
NCBI-ProteinID:
XP_072440060
LinkDB
All DBs
Position
14:16464135..16496954
Genome browser
AA seq
1041 aa
AA seq
DB search
MSETEERPSANLNLNPAEGQTDEASAKPGAMAAEPQMQAPGPGQMDSGDAAFIFKMPKPE
VKEEDPAYEEKMKADRANRFDYLLQQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEK
QTLLSVGDYRHRRTEQEEDEELLSENSKTTNVCTRFEESPSYIKGGKLRDYQIRGLNWLI
SLYENGINGILADEMGLGKTLQTIALLGYMKHYRNIPGPHMVLVPKSTLHNWMLEFKRWI
PTLRAICLIGDKDQRAAFIRDVLLPGEWDVCVTSYEMLIREKSVFKKFNWRYLVIDEAHR
IKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSADFDSWFDTN
NCFGDQKLVERLHMVLRPFLLRRIKAEVEKSLPPKKEVKMYVGLSKMQREWYTRILMKDI
DILNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLVVNSGKMVVLDKLL
PKVKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQDSISAFNTPGSSK
FIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKVVRVFRFITDNT
VEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKESDITDE
DIDAILERGERKTAELTEKLSHMGEGSLRNFTMETEVSVYNFEGEDYREKQKLALTEWIE
PPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNIQDFQFFPPRLFELLEKEILYY
RKTIGYKVPRNPDLPNSAQVQKGEQCKIDEAEPLNDDELEEKEKLLTQGFTSWTKRDFNQ
FIKANEKWGRDDIENIAREVEGKVPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQ
RRISIKKALDTKIGRYKAPFHQLRIAYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDE
LRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENLELEEKEKAERKKRGPKTTS
AQKRKSDGAPDGRGRKKKLKL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagaccgaggagaggccgagcgccaacctgaacctgaacccggccgaggggcag
acggacgaggcgagcgcgaagccgggggcgatggcggccgagccccagatgcaggctccg
ggcccgggacagatggatagtggtgatgcagcatttatattcaaaatgcctaaacctgaa
gttaaagaggaggatcctgcctatgaagagaaaatgaaagcagatagggcaaatagattt
gattatctgctgcaacagactgagctttttgcccactttatccaacctgctgcacagaag
actccgacctcacctttaaagatgaaacctgggcgtcctcgcataaagaaagatgagaaa
cagacacttctgtcggttggagactatcggcatcgccgtacagaacaggaagaggatgaa
gaattactgtcagaaaacagcaagacaaccaatgtctgcacaaggtttgaagaatcccca
tcatatattaaaggaggaaagctcagagactaccagatacgtggcctgaattggttgatt
tctctatatgagaatggcatcaatggaatcttggcagatgagatgggtcttgggaagact
ttgcaaactattgctcttcttgggtacatgaaacattacagaaacattcctggacctcac
atggttctagtccctaaatctacactgcacaactggatgcttgaattcaagaggtggata
ccgactcttcgtgccatttgcctaataggcgacaaggatcaaagggctgccttcatcaga
gatgtcctccttcctggagaatgggatgtttgtgtgacatcatatgaaatgctgatccgg
gagaaatctgttttcaaaaagtttaattggaggtatttggttatagatgaagcccatagg
atcaaaaatgaaaagtctaagctgtctgagatagtgagagaattcaaaacaacaaataga
ctgttactcacgggtacaccacttcagaataatctacatgaactttgggctcttcttaac
ttccttctcccagatgtcttcaattcatctgctgactttgattcttggtttgacacaaat
aattgttttggagatcaaaagctcgttgaaaggttgcatatggtattgcggcctttcctt
ctccgacgtattaaagctgaggtagagaagagcctaccaccaaaaaaggaggtcaaaatg
tatgtaggccttagcaaaatgcagcgggagtggtacaccaggatattaatgaaggatatt
gacatcctaaattcctcagggaaaatggacaaaatgcgtttattgaatatactgatgcaa
ctacgcaagtgctgcaaccacccctatctgtttgatggagctgagcctggcccaccttac
actactgacactcacttagtagttaacagtggaaaaatggtggtattggacaaactgctg
ccaaaagtgaaggaacaaggttctcgtgtgttgattttcagccaaatgaccagggtgctg
gatatcttggaagattattgtatgtggagaaactatgagtattgtagactagatggacaa
actccacatgaggagagacaagattctatttctgcttttaatactcctgggagctcaaag
tttatcttcatgttaagtacacgtgctggtggtcttggtataaatctagctacagcagat
gtagtaattctgtatgattctgactggaatcctcaggttgacctgcaagctatggatcga
gcccacagaattggtcaaacaaaagtagtcagagtcttcagatttataacagacaacact
gtagaggaaaggatagtagaacgtgctgaaatgaaacttagactggactctattgtaatt
cagcaaggaaggttggtcgatcagaatctcaacaaactggggaaagatgaaatgctgcag
atgattcgtcacggtgctacccatgtgtttgcttcgaaagagagtgacattacagatgaa
gatattgatgctatattagaaaggggagaaagaaagacagctgagctgactgaaaagctt
tcacatatgggtgaaggttcacttaggaacttcactatggagacagaggtcagtgtgtac
aactttgagggcgaggactatagagagaagcaaaagttggctctaactgaatggattgaa
ccccccaaacgagaacgtaaagcaaactacgcagttgatgcctatttccgagaggctctt
cgtgtcagtgagcccaaagcgcctaaagctcctcgtccaccaaaacagcccaatattcag
gacttccaattctttccccctcggctgtttgaactactagagaaagaaatcctatattac
agaaaaaccattggttacaaggtgccacgtaatcctgatctaccaaactccgctcaagta
cagaaaggagaacagtgcaaaattgatgaggctgaacctctgaatgatgatgagcttgaa
gaaaaggagaaactgttaacgcagggatttaccagctggacaaaaagagactttaatcag
ttcatcaaagcaaatgagaagtggggtcgtgatgacattgaaaatattgcccgtgaagta
gaggggaaagttcctgaagaagtgattgaatattctgctgtgttctgggaaagatgcaat
gagctccaagacattgagaagattatggcacaaatagaaaggggagaagctagaatccaa
aggaggatcagtattaagaaagcactggacacaaagattggacgttacaaagcacctttc
caccaactgagaatagcatatggtacaaataaagggaagaattatacagaagaagaagac
agatttctgatctgcatgttacacaagctggggttcgacaaagaaaatgtttacgatgag
cttagacaatgcattcgaaactctccacaattcagatttgactggttccttaaatcaaga
actgctatggagttgcaaagaagatgtaatactttaatcactctaatagaaagagaaaac
ttggaacttgaagaaaaagagaaagcagaaaggaaaaagcgtggaccaaaaactacatcg
gcacagaaacgtaaatcggatggagcaccggatgggcgtggccgaaaaaagaagctaaaa
ctttga
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integrated database retrieval system
