Chiloscyllium punctatum (brownbanded bambooshark): 140485778
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Entry
140485778 CDS
T11285
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
140485778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpun04131
]
140485778
Membrane trafficking [BR:
cpun04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
140485778
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
140485778
RAVE complex
140485778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
VPS11_N
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
140485778
NCBI-ProteinID:
XP_072440398
LinkDB
All DBs
Position
2:75976477..76220161
Genome browser
AA seq
3022 aa
AA seq
DB search
MNLHQVLTGAVNPGDSCFSVGNIGDEPFTAYASGCDIVILASDFERLQIIPGAKHGNIQV
GCVDCSMHQGKIAASYGNIICIFEPIALLNQKTKHSTQLNYQWQKSGQFALESVVHNLAW
DPQGIRLLTGSSSLQLWSNGNLEANISEEEAADETDPSKVSDWRCIWESKTASPIHLLKV
SPDGEFFATVGKDDCLVKVWYNSSSWQSAVMAPVIPVDKKEGDIDFSFIYLAHPRAVTGF
SWRKTSKYMPRGLTCNVLLTCCKDNVCRLWAETLLPSDTLISGDGHTQWSESVWTANNLK
RNISNREKLNFRSFRIGRRRSSGLVAHSGYLPHQQDAHEVHRNSPLHANSLCHFHIAASI
NPATDIPLLPSITSLSLSEHEETNGPFVVHWLNNKELHFTLSMEVFLQQLRRNLEQQSPE
SVADDGQMASKSDDDIDEGSEYHKGFMQSVLSDRSNGEKTSSAVMIDHKIEVLLAEWNKN
ADMLFSIHPIDGSLLVWHVDWLDEYQPGMFRQVQVSFASRIPVAFPTGDANSLSKSIVMY
ACTKNVDLAIQQGKLKPPGMTHSTSGMLISAGQNKSSGSLKLSIFTPNVLMISKHADGSL
NQWAVSFAEESAFSTVLGVSHKSRYCGHRFHLNDLACHSVLPLLLTTSYHNAIRTPDDGN
LHNESRSFHSLQCHSSVSRNKRNIGTAAVFQDSNAIYSELILWRVDPVGPLSYSGGVSEL
ARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGHYLRLYQAVIDAKKILSE
LSNPEIAKFVGEVFNIVSQQSTARPGCIIELDAITELYGKETQLLHVFKEDFILVNQPKK
MQQKEGQTSNETSPQQEAEEPHDGFSEKFFLVVIEHKQNNRSVLHMWHLHLKSDSISVDH
ATETPLLSPEEQNGFASEKLHSPFFKKYQACKANLQSASRLALSSKRVYSQELALPEGVE
ITRVTPSAGHLSSSSVHPACLAPYLLATSCSDGKVRFWRCQVSAHSASSAAGDSLESKFS
YCWEEWPLLIEGGLVNSSAVSVPGRPVDLSCSYTSRLAVAYKQSKQINEHSSKHFTMHVC
IFECESTGGSQWILEQTIHLDDLSLSGAILDPRISIDSNLVVYNKQESHLTDHQMTFEAK
PLVHLDWVSKEDGSHILTIGIGSKLLMYGQVSGMIQNQAKKEAPAVFSLSLWDNAKEVSQ
SRWVLLRSVGLVSSVDGSLSLPVSLSWVRDGILVVGMDCEMHVYSQWQPHDKLDPVITEV
ENGSTPSVVSLAKYGNVNGSNPYLFKKNLTRSMTGLAQKFGGKKIPFQWNVEMEDSGLFE
ASHDLSPTLPQYHPLQLLELMDLGKIRRSKAILSHLVKCIAGEVITVNDAETSHERRLRS
LTISASGSTARDPLMTNKSENPDYTEIDSIPPLPLCALLAADEDISHTTFEKPSKRPNIN
KKNCRQQSTVNNYDELFAMSNLGTDLPDGFSVDDDIEQKVIDLSQYSLTYFGPEHARVLS
SHLLHSSLPGLTSMEQMFLMALADTVATISTDIGESRERTQGGETLDECGLRFLLAMRLH
TFLLTSLPPVYRAQLLRQGLSTCHFAWAFHSEAEEELLNMIPAMQRGDPHWSELRAMGVG
WWVRSTNILRRCIEKVAKAAFQRNNDPLEAAIFYLAMKKKAVLWGLFRSLQDKKMTEFFG
KNFSDDRWRKAALKNAFALLGKQRFEQSAAFFLLGGSLKDAVEVCLERLHDVQLALVIAR
LYESEFEVSSTYKSILVRRILGYDPKSKCFNFSLRNSDPVLRSMACWILEDYTNSLNTLL
EQGMKENDNCSVTEYSKSTSCSPGVFNFYNYLRTHPLLLRRHFASSEKTMSQMGLTVESG
LADKISLAERRLFFSTANAHFKAGCPMLALEVLSKMPAVTMKPKNLQNETSSYLTVNFSS
EESKHKVSGCDCSSSIVNGLGSKVPSDWLSNGQSTSSLSFDWSQSSLTIEDQPLELKWDS
DKEDEEEEIGLSMKEINPQCPTAAKIEGESYCNFSSSADDFLSTSEDVIAAQLKFGACLK
ILTTELRTLSTGYEVDGGKLRFQLYNWLEREITALQKTCNYNVDLEAIKDSFDFPESEQA
GNGIVDQQKSLHQQRYLQRRRLWLLENQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQ
ESQQEHSVKQVTSPFVQLASIPLLFACTASAKTVVANPRLHLSNLTQDIVNTIVEFDSPP
HPDMQNNKIYVMHTVAASLSACLYQCLCDGHSYGSSYANQFTGMVYQSFLFAQQRSNRAA
SLDGTITPNTSPDQWPGIKELNHLLNSAGDDDKPKLTILLCEVLTAVYLSLFVHGLGTHS
SNELFRLVAHPLDSKMWAAVFGGGVQQPLKNYIQPKSVTEGRTPDEHHNSFKATGSKATN
REAPSYSTSLPVVSQIIPVYKEKFIPPELSIWDYFIAKPFIPAVQSKFEYDSEESQDSDD
EEDVFASGTQLQEHSNPNSFSWSLMRYAMVQLVLHNLKKFYPMAGLDLSELPVCSPSCHA
ILKTLQRWEQVLLRRLELFGGPPKDFISMHASEGTMSSGPALLIHKALLEPTNTPFKSKH
HTALPVKRLWQYLVKQEEIQEIFIRNIFTKQRCHNEVEADSGYPGGRARIVHKESDIITA
FAINKANRNCVAIATSHDIQELDVSAILATQIYTWVEDEFELESKGSDEFLVVHARDDFG
DLQCSTPYTPTVPGTPINMPWLGSMQTGRGASVMIKRNMNNARRMASHPTLPYYLTGAQD
GSVRMFEWGHSHQLACFRPSGNSRITRIRFNHQGNKFGIVDGDGFLSFWQTSPVAFGATP
KPYLTWQCHNKTANDFVFVSSSTLIATAGQSSDNRNICLWDTLVPQTNSLVHAFTCHDSG
ATVLAYVSKHQLLISGGRKGYVCIFDLRQRLLRQTFQAHDSPIKAIAVDTAEDYFITGSA
EGNMKVWSLSTYNLIHTFSNEHARQSLFRNIGTGVMQIETGPANHMFSCGADGTMKMRVL
PDRFSTGSGKLDIWQDDVRFIL
NT seq
9069 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcaccaggtcttaaccggtgccgtcaaccccggcgacagttgcttctcggtg
ggcaacatcggcgatgaaccgttcacggcttatgcttcagggtgtgatatcgtgatttta
gccagtgattttgaaagacttcaaattattcctggagccaaacatggaaatatccaagtt
ggatgtgttgattgctccatgcatcagggaaagattgcagcatcgtatggaaacataatc
tgcatttttgagcccattgcacttttaaaccagaaaactaagcattctacgcagcttaat
tatcaatggcagaagagtggacaatttgcattggagtcagtggtgcataacttagcatgg
gatccacaaggaattcgtctcttgactggttccagttctttgcagctttggtccaatgga
aatcttgaagcaaatattagtgaggaggaagctgcagatgagaccgatccaagtaaagtc
agtgattggagatgcatctgggagtctaaaactgcatctcccatccatctattaaaggtg
tctccagatggtgaattttttgcaacagttggaaaggatgactgtcttgtgaaagtgtgg
tataattccagcagctggcaatcagcagtgatggcaccagtcataccagtggataagaaa
gaaggagatattgacttttcttttatatacttagcccatcctagggctgttactggattt
tcttggcggaaaaccagcaagtacatgccaaggggtctcacatgtaatgttctgttgacc
tgctgcaaggataatgtttgtcggttatgggcagagactttacttccaagtgatactttg
atttctggagatggccacactcagtggtctgaatctgtctggacagccaacaacctgaag
aggaacatctccaatcgggaaaagttgaatttcagatcctttcgtatagggaggaggaga
tcatctggtcttgttgcacacagtggatatttaccccatcagcaggatgcacatgaagtc
cataggaattcacctctacatgcgaattcactctgtcactttcacatcgcagctagtatt
aatccagcaacagacattccactgctgccctccatcacttcattgagtttaagtgaacat
gaagaaactaatggaccttttgttgttcattggctaaacaacaaggaattgcactttacc
ttatcaatggaggtctttttacagcagttacgaaggaacctggagcagcaatctccagaa
tctgtagcagatgatggacaaatggcaagcaaatctgatgatgacattgatgaaggcagt
gaatatcataaaggatttatgcaatctgtactttcagacagaagtaatggagaaaagacc
tcatcagctgtcatgattgatcataaaattgaagtgctattagcagaatggaacaagaat
gcagacatgctctttagtatccaccccatagatggatccttactggtgtggcatgttgac
tggcttgatgagtatcagcctgggatgtttcgacaagtgcaggtttcatttgcctctaga
attcctgtggcattccccactggagatgcaaactctctcagcaagagtattgttatgtat
gcctgtacaaaaaacgtagatcttgctattcagcaagggaaactgaagccaccaggcatg
actcattccacatctggcatgttaatctctgctggtcaaaataaatcatctggtagttta
aagctcagcatcttcacccctaatgtgctcatgatttcaaaacatgcagatggatccttg
aatcaatgggctgtcagttttgcagaagagtctgcattttcaactgtccttggtgtatct
cacaagtcacgttactgtggtcatcgctttcatctcaatgatttagcttgtcattcggtt
ttgccattactgctgactacttcctaccacaatgcaatacggacaccagatgatggaaac
ctgcacaatgaaagcaggagttttcactccttacaatgtcatagttcagtatctagaaac
aagagaaacattggtacagcagcagtgttccaggattccaatgcaatatatagtgaacta
attctttggcgagtagatccagttgggccattatcgtattctggaggggtatcggagttg
gccagaatcaattctctccatgtttcagctttttcaaatgtggcttggctgccaacttta
atcccaagttactgtctaggtgcatattgcaattctcctagtgcttgctttgtggcaagt
gatggtcattatttgagattatatcaagctgttattgacgccaaaaagattttaagtgag
ctttccaatccagaaatcgctaaatttgttggagaggtattcaatattgtaagccagcag
tcaacagcaagaccaggctgcataatagaattggatgcaatcactgagctttatgggaaa
gagactcagttacttcacgtctttaaggaggattttatattagttaatcaacccaagaaa
atgcagcaaaaggaaggacagacttccaatgaaaccagtccacaacaggaagcagaagaa
ccacatgatggcttttcagaaaaattctttttggtggtcattgaacataagcagaacaac
cgctcagtattgcatatgtggcacttgcacctgaaatccgattcaatatctgttgatcat
gctactgaaactccattgttatccccagaggaacagaatggttttgcctctgagaagtta
cattctcctttcttcaaaaaataccaagcttgtaaagcaaatttgcaaagcgccagtcga
ttggcattgagctcaaaaagagtttatagccaagaattagctcttcccgaaggagtggaa
atcactagagttactccctctgcagggcatctgagttcttcttcagtacatccagcttgc
cttgcaccatatcttctggcaacgtcttgctctgatggaaaagtccgattctggcgatgt
caagtgtcagctcattcagcatcttctgcagctggggatagtttggagagtaaattttcc
tattgttgggaagaatggcctttactgattgaaggaggacttgtgaacagcagtgctgtt
agtgtaccaggaagaccagtggatttaagctgttcttatacaagccggcttgctgtggct
tacaaacagtcaaaacaaattaatgaacattccagtaaacacttcaccatgcatgtgtgt
atatttgaatgtgaatcaacaggaggctcgcaatggattcttgaacagacaatccatctg
gatgacttgagtctgtcaggtgccattttggatccaagaatcagcattgatagtaactta
gtggtttacaataagcaggaatctcatctgactgatcatcaaatgacttttgaagcaaaa
cctttggttcacttagattgggtttcaaaggaagatggatctcatatcttaacgatagga
attggatctaaacttctaatgtatggacaggtttctggaatgatacaaaatcaagccaag
aaagaagcaccagcagttttctctttgtctttgtgggataatgccaaagaagtgtctcag
tcgaggtgggtgcttctgagaagtgtgggtttggtttcctcagtggatggatcattgtca
ttgccagtttcactttcttgggtgcgtgatggtatcctcgtggtgggaatggattgtgaa
atgcatgtttattcacagtggcaaccacatgataaattagatccagtgataactgaagtt
gaaaatggtagcactccttcagtagttagtctggcaaaatatggcaatgtgaatggttcc
aatccttacctattcaaaaaaaacctgacgagatcaatgactgggcttgctcagaagttt
ggtggtaaaaagattccatttcaatggaatgttgaaatggaggactctggcctttttgaa
gcatctcatgatttgtctcccactctgcctcagtaccatcctttacagctcttggagtta
atggacttgggtaaaatcagacggtccaaagctatcctatctcatttagtcaaatgtata
gcaggagaagtaatcactgtaaacgatgctgaaactagccacgaacgacgattgagatct
ctgacaattagtgcaagtggcagcacggcaagagatcccttaatgacaaataaaagtgaa
aatcccgactatacagaaatagactcaatcccccctcttcctctgtgtgcacttttagct
gctgatgaagatatttctcataccacttttgaaaaaccaagcaaacgacctaatatcaac
aagaaaaattgcagacagcaatcaacagtaaacaattatgatgaattatttgcaatgtcc
aaccttggtacagatttacctgatggcttcagtgttgatgatgacattgagcagaaggtt
attgacctttcccagtacagtcttacctactttggccctgagcatgctcgggtactttct
agtcacttgctgcattccagtctgcctggccttaccagtatggagcaaatgtttttaatg
gcattggcagatacagtggcaactatcagcactgacataggagagagcagagagcgaacc
caaggtggagagacccttgatgaatgtggcttaagatttcttttagccatgaggctccat
acattcctgttaacatcactacctccagtctatcgagcacaacttcttcgtcaaggtctg
tctacttgtcattttgcctgggcctttcattcagaggcagaggaggagctgctaaatatg
atccctgcaatgcaaagaggagatccccactggtcagaacttagagctatgggggtaggc
tggtgggtgcgcagcacaaacattcttcgcagatgtatagaaaaggtagctaaagctgca
ttccagagaaataatgatcctttagaagcagctatattttatctcgctatgaagaaaaag
gctgtattatggggtctgttcagatctctccaggataaaaaaatgactgagttttttgga
aaaaatttcagtgatgataggtggaggaaggctgcgttgaagaatgcctttgcgttgtta
ggtaaacaacggtttgaacagtcagcagctttcttccttttgggtggttcccttaaggat
gcagttgaggtttgtctcgaaagacttcatgatgttcagttagctcttgtaatagcacgc
ttatatgaatcagaatttgaagtgtcatccacctataagtctatacttgtcagaaggatc
ctaggctatgacccaaagagcaaatgttttaacttttctctaagaaattcggatccggtg
ttgcggagtatggcatgttggatattagaagattacaccaactcgctgaacactctgttg
gaacaggggatgaaagaaaatgataattgcagtgtgacagaatacagcaagtctacttca
tgcagtcctggggtgtttaatttctacaactatttgcgaacccatccacttttgttgcga
cgacactttgcttcttcagagaagacaatgtcacagatgggtttaactgtggaaagtggt
ctggcagataagatcagcttagctgaaagacgattattcttttcaactgcaaatgcacac
tttaaagctggttgtccaatgttagctcttgaagttttgtctaaaatgcctgcagtcacc
atgaaaccaaagaatttacagaatgaaacaagctcttatttgacagttaatttttcgtcc
gaagaatctaaacataaagtttcgggttgtgattgctcgtcatcaatagtcaatggtttg
ggatcgaaagttccatctgattggctgtcaaacggacaatccacttcgtctcttagtttt
gattggagtcagtcatctctaacgattgaagaccagccattagaattaaaatgggatagt
gataaggaagatgaagaggaggagattggcctgtcaatgaaggaaataaatccacagtgt
cccactgctgcaaagatcgaaggagaaagttactgtaatttctcaagttcagctgatgat
tttttaagtacatcggaagatgtcattgcagcacagttaaagtttggagcttgtttgaag
atacttacaacagagctacgtacattgtctactggatatgaagttgatggtggaaaactc
cgcttccaattatacaactggcttgaaagagaaattacagccctacagaaaacatgtaat
tacaatgttgatcttgaagctatcaaagatagttttgactttcctgaaagtgaacaggca
ggaaatggtattgttgaccaacaaaagtcattacatcagcaaaggtatttgcagcggagg
agactgtggcttctggaaaaccaaccacttctaaggatgtttcttagttattgtagtctc
catgggtctcatggtggaggcctggcatcagtcaggatggagttgattcttcttttacag
gaatcgcaacaggagcattcggtgaaacaggttactagtcctttcgtgcaacttgcatca
atacccctgctatttgcctgcactgcaagtgccaaaactgtggtggctaatcctagactc
catctaagcaaccttacccaggacattgtgaatactattgtagaatttgattctcctcca
catccagacatgcaaaacaacaagatctatgtaatgcacactgtggcagcttctctgtct
gcatgcctgtaccaatgcctttgtgatggccatagttatggttcttcatatgcaaaccag
ttcactgggatggtataccagagttttctgtttgcgcagcaacgttcaaacagagcagca
agtttagatggtacaataactcccaacacttctccagaccagtggccaggtataaaggaa
ctaaatcatctcttgaattctgctggagacgacgataaacccaaactgacaatcctactc
tgtgaggtattgacagcggtttaccttagtctttttgttcatggcttgggaacgcactcc
agcaatgagctattccgccttgtagctcatcctctcgatagcaaaatgtgggctgcagtt
tttgggggaggtgtccagcaacctctgaagaactacatccaacctaaatctgtaacagaa
ggtcgtactcctgatgagcatcacaactctttcaaggccacaggctcaaaagcaacaaac
agagaagcaccctcatacagtacttctcttccagttgtcagtcagatcattccagtctat
aaagagaagttcatccctcctgaactcagcatctgggattactttatagcaaagcccttc
attcctgcagtacagagcaaatttgagtatgattcagaagaaagtcaggacagtgatgat
gaggaagatgtttttgcttcaggcacacagcttcaggagcattcaaatcctaactcgttc
agctggtccttgatgcgatatgctatggtacagttggtgcttcataatttgaagaagttt
tatccaatggcagggctggatctatcagagctcccagtttgttctccttcctgccatgca
attttaaaaactcttcagcgctgggaacaagtgttacttcggcgtcttgagttatttggt
ggcccccctaaagatttcatctctatgcatgccagtgaaggcacaatgtcttcaggtcct
gctctcctcattcataaagcattgctggagcctaccaatacgccattcaagtcaaaacac
cacaccgctcttcctgttaaaagactttggcaatatcttgtgaaacaggaagaaatacaa
gagattttcattcgaaatattttcacaaaacagagatgtcacaatgaggtggaagctgat
tctggttaccctggtggaagggcaaggattgtgcataaagaatctgacatcattacagca
tttgcaattaataaagctaatcggaactgtgttgccatagccacaagtcatgatatccag
gaactagatgtgtctgcaatcctggctacccagatctacacttgggttgaagatgagttt
gaactggaatcaaaaggatctgatgagtttctggttgttcatgctcgagatgattttggt
gatttgcagtgcagcacaccttatactcccacagttcctggcacaccaataaatatgcca
tggctgggcagcatgcagactggcagaggggcatctgtgatgatcaagcggaatatgaac
aatgccagaagaatggcttcacatccaaccctaccttattatctaactggtgctcaagat
ggtagtgttcgaatgtttgagtggggtcactctcatcaactagcatgctttcgaccttct
ggcaactccaggataaccagaatacgatttaatcatcagggtaataagtttggaattgtt
gatggtgatggattcttgagcttctggcaaacaagcccagttgcttttggagctacaccc
aaaccttatctgacctggcagtgccataacaagactgcaaatgattttgtttttgttagt
tcatctactttaatagcaacagctggacaatctagtgacaacaggaatatctgcctctgg
gatacacttgtgccacaaaccaatagtctagttcatgctttcacctgtcatgacagtgga
gccaccgttttggcatatgtatcaaagcatcaacttttgatatctggtggaagaaagggt
tacgtttgtatatttgatctacgtcagcgactgctgcgtcaaacctttcaggcacacgat
tcacctataaaagcgattgctgtagatacagcagaggactacttcattactgggtctgct
gagggtaatatgaaggtttggagtttgtctacttacaacctgattcacacattctcaaat
gaacatgctcgacagtcactcttcagaaacataggaacaggagtcatgcagatagagact
ggtccagcaaatcacatgttctcgtgtggagctgacggcacaatgaagatgcgtgtcctg
ccagatcgttttagcacaggaagtggcaagttagatatctggcaagatgatgttagattt
atattatga
DBGET
integrated database retrieval system
