Chiloscyllium punctatum (brownbanded bambooshark): 140486190
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Entry
140486190 CDS
T11285
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpun03000
]
140486190 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cpun03310
]
140486190 (rorb)
Transcription factors [BR:
cpun03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
140486190 (rorb)
Nuclear receptors [BR:
cpun03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
140486190 (rorb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
OmpH
Motif
Other DBs
NCBI-GeneID:
140486190
NCBI-ProteinID:
XP_072441072
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Position
2:84960513..85223582
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AA seq
475 aa
AA seq
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MCQTQQKMKTEVITQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQ
RNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQ
QQSGEAEALTRVYTNSISNGLTDLNNEIGGTYSNGHVIDLPKVQSEGANGYYSVDSAQPS
PDQSGIDMAGIKQIKQEPIYDLTPVPNLFTYSSFTNGQLAPGVTMAEIDRIAQNIIKSHL
ETCQYTVEELQQLAWQTHTYEEIKTYQNKVREVIWQQCAIQVTHAIQYVVEFAKRITGFM
DLCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQTFKALGCDDLVNAIFD
FAKSLCSLQLTEEEIALFSAAVLISPDRPWLMEPRKVQKLQEKVYFALQHVIHKNHLDDD
TLAKLISRLPTLTALCNLHTDKLQTFKLLHPETANSLFPPLYKELFNPDSSVLPK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtgccaaacacagcagaaaatgaaaactgaagttataactcaaattgaagtaatacct
tgcaaaatctgtggtgataagtcctctgggatccactatggagtgatcacttgtgaaggc
tgtaagggattctttaggaggagtcagcagaacaatgcctcttactcctgtcctcgacag
agaaactgtttaatcgatcgaactaatcggaatcgttgtcagcattgtcgcctgcagaaa
tgtcttgcccttggaatgtctcgtgatgctgtaaagtttgggagaatgtccaagaagcag
cgggacagtctatatgccgaagtacaaaagcaccaacagagactacaagagcaacggcag
cagcagagcggtgaggcagaggccctcacccgtgtctatacaaacagcatcagcaatggt
ttgacagacctgaacaacgaaattggtggcacttattcaaatggacatgtcattgatctt
ccaaaagtacaatctgagggagctaatggatattacagtgtagattctgctcaaccatca
ccagatcagtctgggatagacatggctggaatcaagcaaataaaacaagagcctatttat
gacctcacccctgttccaaacttgtttacgtatagctcttttacaaatggtcagctggct
cctggagtaacaatggctgaaatagatcgtattgcacagaatataatcaagtcccacttg
gagacatgtcagtatacagtggaagaacttcaacagttggcatggcagacgcacacatat
gaagaaataaaaacttaccaaaacaaggtgagggaagtcatatggcaacaatgtgcaatt
caggtcacgcacgcaatacagtacgtagtcgagtttgccaaacgcattacagggttcatg
gacttgtgtcagaatgatcaaatactcctcctcaaatcaggttgtttggaggtggtgttg
gtcagaatgtgccgtgcctttaatccactgaacaacacagtgctttttgaaggaaaatat
ggaggcatgcaaacattcaaagctctcggatgtgatgacctagtcaatgctatatttgac
tttgctaagagtttgtgctcccttcagctgactgaggaagaaattgctttgttttcagct
gctgttctgatatcaccagatcgaccatggttgatggaaccaaggaaggttcaaaagcta
caggaaaaagtttattttgcactacagcatgtgattcataaaaatcacctggatgacgac
acattagcaaagttgatctccaggttaccaactttaactgcactttgcaacctgcacact
gacaagctccagacattcaagctgttgcacccagagacagccaacagcctgtttcctcct
ctctacaaggagctctttaacccggactcttcagtcctccccaagtga
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