Chiloscyllium punctatum (brownbanded bambooshark): 140487172
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Entry
140487172 CDS
T11285
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpun01002
]
140487172 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpun04121
]
140487172 (usp48)
Enzymes [BR:
cpun01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
140487172 (usp48)
Peptidases and inhibitors [BR:
cpun01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
140487172 (usp48)
Ubiquitin system [BR:
cpun04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
140487172 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Usp-48
Actin_micro
UvrD_C
DUF7627
Motif
Other DBs
NCBI-GeneID:
140487172
NCBI-ProteinID:
XP_072442910
LinkDB
All DBs
Position
16:41867112..41994353
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AA seq
1048 aa
AA seq
DB search
MAPKQQLEKAAWQWTESVRPEEVKQEHIELAYRIRLGSCRRDARRRNCRGNPNCLVGLGE
HVWLGEIDENSFHNIDDPNSERRCKNTFVGLTNLGATCYVNTLLQVWFHNLELRQALYLC
HSPRKEIGTGEAIEDDAEFEPQSIFEHLQYLFALLQSSNRRYIDPSGFVKALGLDTGQQQ
DAQEFSKLFMSLLEDTLSKQNNPDVQNIIQQQFCGQYAYVTVCNQCRRESKLLSRFYELE
LNIQGHKQLTDCIDEFLKEEKLEGDNRYFCDECQDKQNATRKIKLLSLPRTLNLQLLRFV
FDRQTGHKKKLNSYISFPEVLDLTTYLERKDIGCIYELSAVLIHRGVSAYSGHYIAHVRD
DRTGDWYKFNDEEIEKMEGKKLQLGIEEDLAEPSKSQTRKPKCVKGVHCSRNAYMLVYRR
KVEGGKEKEITVQLPPHLQKMVERDNKKFEEWCMEMAEMRKQSVDKGKAKHEEVQELFNM
LPAKEDEHYEFLPVDWLRKWLDDSAVTKPIDNSCHLCAHNRLIPDKICDVKRISQKAADI
FYARYGGGPRLDATALCRDCVVEKCRILRLKNQLNEDYKIISNLTRTTLQSHEGYWVGKA
SLRSWRQLALNQLDGKEDDPDHTDGKSNGEGLNDLHAKGDDEIIGEKDDDEDMNFNEDLV
CPHGDLCTSETERRLVSVETWHRLKAYFPKSPEFPHYHSPCVQCQVLEKEGEENETLSKM
MANEQKSALLCLFQDKNRPLLIKWPEETDVLYVVSQFFVEEWKKFIRKPTKCSPVSSVGN
NALLCPHGGLMFTAESMTKEDSKHVALLWPSEWEIIHKLFVVDNTIKVIRLMSTGEHGTV
QLEYTTSPDLCGECREGLLCQQQRDLREYTQATIYIRKVVESIKVMKEGAPELNLSGSEA
EEEREECKVEGEKDPDFNQSNGAKRRKLTHPCIGGGNSSTYYKQGIRRSTRHRVRGEKEL
IVSANQTLKELKIQIMHAFSVAPFDQNLSLEGRMLTDDTATLGNLGIIPESVILLKADEP
IADYTAMDDIMQVCMPEEGFKGTGLLGH
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggccccgaagcagcagctggagaaggcggcctggcagtggactgagagcgtcaggccg
gaggaggtgaagcaggaacacatcgagctggcgtaccgcatccgcctgggctcctgccgc
agggacgcccgcagacgcaactgtagaggaaacccaaactgcttagtaggtcttggtgaa
catgtttggctgggagaaattgatgaaaatagcttccacaacattgatgatccaaactct
gaaaggagatgcaagaatacctttgttggattaactaatcttggagctacttgttacgtt
aacaccctgcttcaggtttggtttcacaaccttgagttgcgacaagcactgtatctgtgc
catagtcctcgaaaggaaatagggactggagaagcgattgaggatgatgcagaatttgaa
ccacaatccatctttgagcaccttcagtacttgtttgctttgttgcaaagtagcaataga
cgatatattgatccttctggttttgtaaaagcactgggcctggatacagggcaacagcag
gatgctcaagaattctccaagctttttatgtcactattagaggacacactatcaaaacag
aacaatccagatgtacagaatattattcagcagcagttctgtggacagtatgcgtatgtc
acagtgtgtaatcagtgcaggcgggagtctaagctgttatctcgtttttatgaactggag
ttaaatatccaaggacacaagcagctgacagattgcattgatgaatttctgaaggaagaa
aagctggaaggagataacaggtacttttgtgatgaatgtcaggacaaacagaatgctact
aggaaaattaaactactcagccttccaagaacactcaatttgcagcttttgaggtttgtc
tttgacagacaaactggtcataagaaaaagctaaactcttacatcagctttcctgaagtt
ttagacctaactacataccttgaacgaaaagatattggctgtatttatgaactgagtgcg
gtgctgatccacagaggggtgagtgcatattccggccattacattgcacacgtgcgagat
gacaggaccggcgactggtataaatttaatgatgaggagattgagaaaatggaagggaag
aagctacagttggggatagaggaagatcttgctgaaccttcaaagtcacagacacgaaaa
cccaagtgtgttaaaggtgttcactgttcgcggaatgcttacatgttggtgtacagacgt
aaagtggaaggaggcaaggaaaaggaaataactgttcaactcccaccacatttacaaaaa
atggttgaacgtgataacaaaaagtttgaggagtggtgcatggaaatggctgagatgcgg
aaacagagtgtggacaaaggcaaagccaagcatgaagaggtgcaagagctctttaacatg
ttaccagctaaagaagatgagcactatgaatttctaccagtggattggttacggaagtgg
ctggatgactcagcagtaacaaaaccaattgataattcttgccacctgtgtgcacataac
agacttattcctgataaaatctgtgatgtcaaaaggatttctcagaaagcagctgatatc
ttctatgctagatatggaggtggtcccaggttggatgctactgctttatgtagagattgt
gtggtggaaaaatgcaggattcttagattaaaaaatcagttaaatgaagattacaaaatc
atctccaacttgaccaggaccacattgcaaagccatgaaggatattgggtgggaaaagcc
tcacttcgaagttggcgtcaactagcactaaatcagttggatggaaaggaagatgaccca
gatcacactgatgggaaaagcaatggagaaggcctaaacgatttgcatgccaaaggggat
gacgagataataggagaaaaggatgatgatgaagacatgaactttaacgaagatcttgtc
tgtccacatggcgatttatgcacatctgaaactgaaagaagacttgtgtctgttgaaacg
tggcatagactaaaggcttatttcccaaagtcacctgaattcccacattatcactcgcct
tgtgtacagtgtcaggtattagagaaggagggtgaggaaaatgagactctgagcaagatg
atggcaaatgagcagaaatcagcacttctatgtctttttcaagataagaatagaccactg
ctaatcaaatggcctgaggagacggatgttctttatgttgtttcccagttttttgtcgaa
gagtggaagaagtttatcaggaagccaacgaaatgcagtcctgtatcatctgtgggtaac
aatgcacttctctgtccacacggaggtctcatgtttacagcagagtcaatgaccaaagag
gattcaaaacatgtagctcttttatggccaagtgaatgggaaatcatccacaaattattt
gttgttgataatacgattaaagttattcgactgatgagcactggagaacatggcactgta
caactggaatataccaccagtcctgatctttgtggagagtgtcgggaaggtttactttgt
caacagcagcgagatttaagagagtacacacaggccactatctatatccgaaaagtagtg
gagagtatcaaggtgatgaaagaaggtgcaccagagctaaatttaagtggttcagaggca
gaggaggagagagaggaatgcaaagtagaaggagagaaggatcctgactttaaccagagt
aatggagcgaaacgacggaagctgacacacccttgtattggtggtggtaacagcagcacg
tactataaacagggaattcgacgtagcacacggcatagagttcgtggagaaaaggagctc
atcgtgtcagcgaatcagactctcaaagagttgaaaattcagatcatgcatgccttttct
gttgcaccatttgatcaaaatttgtcactggaaggacggatgctaactgatgacactgca
acactgggaaatctgggaattatcccagaatcagtcattctgttaaaggctgatgaacca
attgctgattatacagcaatggatgatataatgcaagtatgtatgcctgaagagggtttt
aaaggtactggtctactgggccactga
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