Chiloscyllium punctatum (brownbanded bambooshark): 140487287
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Entry
140487287 CDS
T11285
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04512
ECM-receptor interaction
cpun04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140487287 (frem1a)
04518 Integrin signaling
140487287 (frem1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cpun04091
]
140487287 (frem1a)
Lectins [BR:
cpun04091
]
C-Type lectins
Lecticans
140487287 (frem1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Big_9
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
140487287
NCBI-ProteinID:
XP_072442991
LinkDB
All DBs
Position
2
Genome browser
AA seq
2111 aa
AA seq
DB search
MKHYWEHPAILMYLCLWRCIAPSFIQVNLGLSVPKGQSAFLSKEDLQFNVPKENDSCKVE
VVVNEPITQRVGKLTPQVFDCHFLANEVKYTHNGCPILDEDQVMLRLYRFTETETFTETF
ILKVHLLDSDCNIIQLGSTSLEVPEFYGFSNIIDRNVLTFVYDAAMNLDCTVHITIQDTL
LPAYGQLVMGKPPEGPARGDQPNSFLQIMKTSSKEKSSQDNLKEVHALEVNCEEFLVLGL
HYQHLRPPSPDVDYITISLELVDSRSKNVHKKENAWIPVRIRNAFPNLPPKASFIAMYIL
EVDQFILTPITTHTLDGEDSESPKTQLVFNVTKPPLQGFITHLSDHTKPITSFTWTDLNE
MLIAFQPPNNSHTERRNYEVEFEVHDFYFRNSAPIMVHISIRTTDTNAPRVSWNMGLDLL
EGQSRTITWEQFQVVDNDALSAVRLITVDGLLHGRLTVRGGKGFMFTVDDIKSGVVHYHH
DDSDSTNDFIVFRIFDGNHSTRHKFPINILPKDDSPPFLINNVILELYEDQEIQIEKVML
QASDMDSSDDYILFKIIKPPQAGEILKRTAPELSGYPITRFQQSDLFNARIYYRHLGGEV
FEDTFEFILSDSHEPPNLSDPQTVIIHITPVDDQLPKEAPWALRHLVVKETEIAHLTKNQ
LYFTDTEIPDGEIVYAITAGPFFTSALGLSDAGKLFLTDSMKKLTKKSNVPMLRSFTQHA
VNYLKVAYMPPIQDIGPDPQHVQFLFSVSNQHGGTLIGLCFNITVLPVDNQAPEILTKQL
DVEEGGVGQITVDHILVMDVDTKDHQIKIVLQKQPVHGVVKVDGDPMIEGDTFNLEDLGQ
LKISYNHDDSETRHDEVTFSATDGSNSAECVLQIQILPVNDEPPTMKPGLKPMMYCLEGA
EVAITAENLYATDLDSDDERLMFMIARQPFHGAVQKDSQIIDHFSQADILSGSVTYIHTG
GEVGLTPCFDTITFVISDWDGGTVEGCCSEEPFSPLLSIHNSLPVYDLNITIMPINNQPP
TIIIGETFIVDEGLSAAITVGHLCASDLDSANDELTFILWSSPQFGYIENTLPSPGYEKS
NVGISIDSFDMKHIKDFQINYVQFHHQQIEPTADQFMLYVTDGQHQSAAVPFYIIIQPTN
DEPPSFLARNITVSEGQVRELDPSIINVADLDLPTDSLVFIIKQQPNHGKIVNGNDIIQY
KHQIHSHEEHLVHDFTMDQLKHGMKLMYKHDDSETKTDSFTIQLSDGKHTVQKVIQVTIL
PVNDEKPLLSRNNELEVEFGDSRIISSVVLEAEDKDTSRQHVYYVMDSVPKQGVLQIKEG
RDWIPLHPGMNCSQDDIDMNRLRYIHTGAIGSNGRDSFHFHLSDGDHRSSVHRFQIFIQN
IEKGEIMIFLKPLTIFMGERGILTTAILLASDGSNKPEELLYVITMPPSYGQVEYITYPG
VAITSFSQMDVAAQAVSYTHKSTVAATSDSLRFIVSNGLSTRNGSLEIIIENIDRILPTL
LNNKGIRLVEGSMVSISPDVLQLSDPDTPPQNLTYIIAQQPQHGQLHLKGAVLKQHNFTQ
LDIDSMDIAYKHDGGESQIDRFTFVVTDMTNHGFLVNGVLHTEPSVFTIQVDHKDKAFPR
IVYLQCPSQVEVFKNQKYGIYISSRHLKASDRDSKDEELIYHILREPNIGYLENVTTGGF
IWNKFTQKDLNSRNIIYIISASSAVMSDSLEFQVSDSSGNSALPQILDLKWSRIEMMESE
YRVCEDVGLFSVKVLRTGYFMDSAFVGIKVNSISALVGKDFTHSSANLIQFDPGVSVKCW
NIVITNDKLEENEESFEVLLTSPINAVLGAKAKILIKIIDGEKDRCTLAFMNDRNEENPP
GRVLRERLASGSSTIPNLKSNSSLVEGMAMTNLHEDLKKSQGDVMQQFPLKPPSKKKLMY
HGVIALKVEGDHSPSVYNRRATVVITSQSQQHFLGKTELSQTDKVTTVPASQQIPVQQEP
SSKICPSGWTYHDDRCYYLNTKHKATWIGAARACKEMYHGNLVSVISKQDMEWLWDFSGR
RSFWIGLNDRISPGKWNWAGGEHVSFTNWKRGLPPTSRKKGKNCVLVRRRGKWEVKNCKQ
GKPHYYMCSVR
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
atgaagcattactgggaacatcctgcaatccttatgtacctttgtctttggcgatgtatt
gcaccgtcctttatacaagtgaatcttggcctaagcgttcctaaggggcagtctgcattc
ctttccaaggaggatctgcagttcaatgtcccgaaggagaatgacagctgtaaggtggag
gtggtcgtgaatgaaccaatcacacaacgtgtcggcaagcttacccctcaggtttttgat
tgccacttcctagccaatgaagtgaaatatactcataatggttgtccaattcttgatgag
gatcaagtcatgctgaggctgtacaggtttacagagacagaaaccttcacagaaacattc
attttaaaggttcacctgctggattcagattgcaacatcattcagctgggctcgacatca
ttggaagtccctgagttttatggtttttctaatataatcgataggaatgtgcttacattt
gtctatgatgcggcgatgaaccttgattgtactgtacacattactattcaggacacatta
ctgccagcatatgggcaacttgtcatgggaaagcctccagagggaccagctcgtggtgac
cagccaaacagcttcctccaaattatgaaaacatccagcaaggaaaagtcaagccaggat
aatttgaaggaggttcatgctcttgaagtgaactgtgaagagtttctggtactgggtctt
cactaccaacatctccgtcccccttctcccgatgtcgactatatcaccattagcttggaa
cttgtcgacagcagaagcaaaaacgtgcacaagaaagagaatgcctggattccagtcaga
atcaggaatgcttttcccaatttgcctccaaaagcaagttttattgcaatgtacatcctg
gaagtagatcaatttattctgacccccataaccacacacactctggatggtgaagacagc
gagagccccaaaactcaacttgtcttcaatgtcaccaaaccacctctacaaggttttatt
acccatttatctgaccacaccaagccaatcacatctttcacctggactgatctaaatgag
atgctcattgcatttcaacctccaaataacagccacactgaaaggaggaactatgaggtt
gaatttgaagttcacgacttctatttcaggaatagtgcaccaatcatggtgcacatctca
atcaggacaactgatactaatgctcccagagtttcctggaacatgggacttgaccttttg
gaaggccagtctcgaactatcacctgggagcagtttcaggtagtggataatgatgccctc
agtgcagtccgtttgattactgtggatggtttactacatgggcgacttactgtaagaggt
ggaaaaggttttatgtttacagtcgatgacatcaagtctggcgttgttcattaccatcat
gatgacagtgactccacaaatgacttcattgtatttcgaatttttgatggtaatcatagc
acccggcacaaatttcccattaacatccttccaaaagatgatagccctccattcctcatc
aacaatgtcatcctggaactttatgaggaccaggaaatccagattgagaaggtaatgctt
caagcctcggacatggactcaagtgatgattacatcctcttcaaaatcatcaaaccccct
caggctggagaaattctgaaaagaacagctcctgaactgtcaggttaccccataactaga
tttcagcagagtgatctctttaatgctcggatctattatcgtcacttgggaggtgaagtg
tttgaagatacctttgaatttatcctgtctgacagccatgaaccaccaaatctctcagat
cctcagactgtaattattcacattacaccagtggacgatcagcttcccaaagaagcacca
tgggctctgcgccatcttgttgtcaaggagactgaaatagcgcatctgacaaagaaccaa
ctatatttcactgatactgagatacctgatggtgaaattgtatatgcaataacagctggt
ccattctttacatcagcgcttggcctgtcggatgctgggaaactgtttttgacagacagc
atgaagaaattgacgaaaaaatctaatgtcccaatgctgagatcattcacacagcatgcg
gtaaactatctgaaagtggcatacatgcctcctatacaggatattgggccagatccacag
cacgttcaatttctcttttcagtcagtaatcaacatggtggcacattaattggcctttgc
ttcaatattacagttctcccagttgacaatcaagcaccagagatcttgacaaagcaattg
gatgttgaggaaggaggtgtaggtcagattacagtggatcatattctggtgatggatgtg
gacacaaaagatcaccagatcaagattgtgcttcagaaacaaccagtacatggagtagtc
aaagtggatggtgatcccatgattgaaggggacaccttcaatctagaagaccttgggcag
ttaaaaattagttacaatcatgatgactctgagacacggcatgatgaagtcaccttttca
gccactgatggttcaaattcagctgaatgtgtactgcaaatccagatactgccagtgaat
gatgagcctccaacgatgaagcctggcctgaagcccatgatgtattgtcttgaaggggca
gaagtcgctatcacagcagaaaatctctatgctactgacctagatagcgatgatgagagg
ctgatgtttatgattgcaaggcaaccattccatggagcggtacagaaggatagtcaaatt
attgaccacttttctcaggcagatatcctttctggctcagtgacatatattcatactggt
ggtgaggtaggattaacaccctgttttgacaccattacttttgtcatctcggattgggat
ggaggtacagtggaaggctgctgttctgaggaaccattttctcctttgttatcaatacac
aactctctgcctgtgtacgatcttaacattactataatgccaatcaacaatcagccaccg
accattatcattggtgaaacctttattgttgatgaagggttgtcagctgctatcactgtc
ggccatttgtgtgctagtgatctggattctgccaacgatgaactgacttttattttgtgg
tcttcaccccagtttggttacatagagaacacattaccttcaccaggctacgagaagagt
aatgtgggcatcagcatagattcctttgacatgaaacacataaaggatttccaaattaac
tacgttcagtttcatcatcagcagattgaaccaacagctgatcagtttatgttgtatgtt
actgatggacagcatcaatctgcggcagtgccattttatattataatccaaccaaccaat
gacgagcctccaagctttcttgccagaaatattacggtttctgaaggtcaagtacgtgaa
ctggatccatcaataatcaatgtggcagatctagacttacccacagacagcttggtattc
attataaaacagcagcccaaccatggaaagatcgtgaatggcaatgatatcatccagtac
aaacatcaaatccacagtcatgaagagcatcttgtgcatgacttcacaatggatcagctg
aagcatggaatgaagttaatgtataagcatgatgactccgaaactaagacggatagtttc
accattcagctgtcagatggcaagcatacagtacaaaaagtcattcaagtcacaattctt
ccagtaaatgatgaaaaaccattattgagcagaaacaatgagttggaggtggagtttggg
gatagcagaatcatctccagtgtggtgctggaagctgaggataaggacacttcacgacag
catgtttattatgtgatggatagtgttcccaaacagggagtgctccagatcaaggaaggc
agagattggatacccctacaccctggcatgaactgcagccaggatgacattgacatgaac
cggctgagatacatccacactggagcaattgggtcaaacggtcgagacagctttcatttc
cacttatcagatggtgatcatagatcttctgtccaccgttttcaaatcttcatccaaaac
attgaaaagggtgaaattatgattttcctaaaaccactcaccatcttcatgggagagcga
ggcattttgacgacagccatccttcttgcctctgacggctcaaacaaaccggaggagctg
ctttacgtcataacaatgcccccaagctatggccaagtagaatatatcacctaccctgga
gtggcaataaccagttttagccaaatggacgtggcagctcaggcagtatcttatactcac
aaaagcacagtggcagctacaagtgactcattgagattcattgtcagcaatggactgtcc
acaagaaatggaagtctcgagatcatcattgagaatattgatcgtatcctgcccacactg
ttgaataacaaagggatccgattagttgaaggctccatggtgtccatttctcctgatgtg
ctacagttgtctgatcctgatacccctccacagaacctcacctacatcattgcacaacag
ccacagcatggacaactgcatctcaagggggctgttctgaagcagcacaacttcacacag
ttagacattgacagtatggatattgcgtacaaacatgatggaggagagtcgcagattgac
agattcacctttgttgtcactgatatgactaatcatggctttcttgtcaatggagtattg
cataccgaaccatctgtattcacaattcaggtggaccataaggacaaggctttcccaaga
attgtctaccttcagtgtccgtcacaagttgaagtgttcaaaaatcaaaagtacggaata
tatatttcctctcgacacttgaaagcatctgatcgtgatagtaaagatgaagaactcatt
taccatattttacgtgaaccaaatattggttacttggaaaatgttaccactgggggattt
atttggaataagttcacacagaaagatttgaacagcagaaacatcatttacatcataagt
gcttcctcggcagtaatgtcggacagtttggagtttcaggtttcggactcctcaggcaac
tctgctctcccgcaaatacttgatctcaaatggtctcgtatagaaatgatggaatcagaa
taccgggtatgtgaagatgtaggactattctctgtgaaagtcctgaggacagggtatttt
atggattctgccttcgttgggataaaggtcaacagcatttcagctttggttggaaaagat
tttactcacagttctgccaaccttatccagtttgatccaggtgtgtcagtgaagtgttgg
aatatagtcattactaatgacaaattggaagaaaatgaggaatcatttgaagtgttacta
acatcgccaatcaatgcagttcttggtgcaaaggcaaagatattgattaagatcattgat
ggagaaaaagatcgctgcactcttgccttcatgaatgacagaaatgaagagaatccacca
ggcagagtgctgagagagagactagcttcaggttcctcgaccatccctaatctcaagagt
aacagtagcctagtggaaggaatggcaatgactaacttgcatgaagacttgaaaaagtcc
caaggggatgtgatgcagcagttccctctgaaaccaccctccaagaagaaactaatgtac
catggagtaatagcactgaaagttgaaggtgaccatagtccatcagtgtacaatagaaga
gcaacagtggtgatcaccagccagagtcaacagcattttcttggtaaaacagaactttca
cagactgataaagtcacaacagtgccagcttcacaacagattcctgtacaacaggagcca
agttccaagatatgtccttctggatggacttaccatgatgataggtgctattatctcaac
actaaacataaggcaacctggattggagcagccagagcctgcaaggaaatgtaccatggc
aaccttgtgagtgtcatttcaaaacaagacatggaatggttgtgggacttcagtggaaga
cgttctttctggattggactcaatgaccggatcagtccaggcaaatggaattgggctgga
ggagaacatgtgtctttcacaaactggaagcggggcctccctcctacttcaaggaagaaa
ggcaaaaactgtgtcctagtgaggagaagagggaagtgggaggtgaaaaattgcaagcag
ggcaaaccacattattacatgtgctctgttcgttaa
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