Chiloscyllium punctatum (brownbanded bambooshark): 140487813
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Entry
140487813 CDS
T11285
Symbol
depdc5
Name
(RefSeq) LOW QUALITY PROTEIN: GATOR1 complex protein DEPDC5
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
140487813 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpun04131
]
140487813 (depdc5)
Membrane trafficking [BR:
cpun04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
140487813 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
IML1_N_fung
Motif
Other DBs
NCBI-GeneID:
140487813
NCBI-ProteinID:
XP_072443196
LinkDB
All DBs
Position
17:complement(48664585..48886400)
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AA seq
1584 aa
AA seq
DB search
MRTNRVYKLWIHKKGFGGSDYELMVNPKVFPQVKLGDIVEIAHINDEYSPLLLQVKSLKE
DLQKETISVDQSVAQVFKLRAYQDVYVNIVDPKDVALDLVELTFKDQYIGRSDMWRLKKN
LVNTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLSDLFAKWKDKNCSHEVTVVLFSRTFYDGKSLDEFPDSHRP
SIQVDHEGRFYEDFYKVVAQNERREEWTSLLTTIKKLFIQYPVLVRLQEADGFPRGQNST
AAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRGVPGDSRLGDDYNIPHWINHSFYTSKSQLYYNSFT
PRIKLAARKAPAEKGKSNKDNTIGASSPKESENSLPIQVDYDAYDAQVFRLPGPSRVQRP
TSFRPVRESHTRKSSSSYDVSNSPPHHRGALLLEEVRSQASDDSSLGKISNILLIPRPHL
HQYEVSSSLGYTSTRDILERMIDSQQRDSSAPGRFHVGSAESMLHIRPGGYTPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEPIQIHHQTRQHMAELQGSSLQDPTHSSAELLE
LAYHEATGRRSAAKQIADNLSFLGCTGTDEFATSPASSHSAGTPLNQASSYEDPTASRDP
MPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGCYDLLPETDVDRRDEDGPV
MTAQQVFEEFICQRLMQGYQIIVQSKNRLSSTAASAPLSSSPLYTRGLVSRNKLEEEETA
FWLSMGRTFHKVCLKDKIITVTRYLPKYPYESAQIQYTYSLCPPHSNTEFVSCWVEFLHE
RLEEYKWNYLDQYICSSGSEDFSLIESLKFWRTRFLLLPACVTATKRIVEGESRCDVYGE
KLHSDQEEWQLLDGFIRFVEGLNRIRRRHRSDRIIRKGAPIKGLQVTGPLSNYPTEPAGP
PLGKKGTSALSALLEMEANQRSFEEQQAAVHSGKGAGPASDSTPHSVANVAVTPSHVDSP
RKVQGDQVPTGTDYPDYSPASGTTAPTGDRSNTSGNAQASGMGITQGTGDQPPAPASQEG
SSQLSSGIANSLTSSSSLAEILEIMKHPSTGIQLLPEQRGLYPNCFISAEVVHWLISNVE
GVQTQLMAIDIMQKMLDEQLIVHAFGESMRTFVYGFYLYRLVTDKDTEKGNLQSSTIWYT
STMDDLAAFQRKWFEVAFLTEERLHVDIPAFLLPWLPSRPASYASRHSSFSRSFGGRSQA
AALLAATVPEQKTVTLAVDVNNRSDHVEWCSCYYHGNYSINAAFEIKLHWMAVTSAMLFE
MVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRTQLFIPLTISCLVKEGAEHIFDGF
EPETYWDRMQLLQEAILVRFGFVQDKYTASAFNFPAENKPQYIHVTGTVFLQLPYSKRKF
PSGQQRRRRNSTSSSTQSLFGEERIGYNWAYNTMLTKTWRSSATGDEKFADRLLKDFSDF
CSNKDNRLVSFWESCLEKMHSSAP
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaaccgagtttataaactgtggatccacaagaagggcttcggcggcagcgac
tatgagttgatggtgaaccccaaagttttccctcaggtgaagctgggcgacattgtggag
attgcacatattaatgatgagtacagcccgctgcttcttcaggtgaaatctttgaaagaa
gacttgcagaaagaaactattagtgtggatcagagtgtggcccaggtgtttaaacttcgg
gcttaccaggatgtctatgtcaatattgtggatcccaaggatgtggcgcttgacctggta
gagcttaccttcaaggaccagtacattggacgcagcgacatgtggcggttaaagaaaaac
ctggttaacacctgtgcctatgtcactcagaaggtggaatttgctggaataagagctcaa
gcaagtgaactttgggtcaaaggtgaaaaggttacctgtggctacataagtgaagacaca
agggtggtattccgatccacctctgccatggtctatattttcatccagatgagctgtgag
atgtgggactttgacatctatggtgatttgtactttgagaaggctgtgaatggtttcctc
tcggacctcttcgccaaatggaaggataaaaattgcagccatgaagtgacagtggtttta
ttttccagaactttctatgatggcaagtcactggacgagttccctgacagtcaccgaccc
tccattcaggtggatcatgagggcaggttctatgaagacttttataaagttgttgcccag
aatgaacggcgggaggagtggacgtcactgcttacaacaattaaaaagctattcattcag
tatcctgtgctggtgcgtttgcaggaagcagatggttttccacgtggacagaattctaca
gcagctcaaggaaactatttggaggccatcaatctctccttcaatgtctttgacaagcat
tacataaacaggaactttgaccgcactggccagatgtctgtcgttatcacacctggagtg
ggagtatttgaagttgaccgacttctgatgattcttaccaagcaacggatgatcgacaat
gggattggtgttgacctggtgtgtatgggtgagcagcctcttcatgccgtgccattattt
aagttacacaatcgcggggtccctggagattcccgtctaggtgacgattacaatattccc
cactggataaaccacagcttctatacctccaagagtcaactttattataatagtttcact
cctcgcattaaacttgcagccaggaaggctccagcagagaaaggcaaaagtaataaagat
aacacaataggtgcgagcagcccgaaggaatctgagaacagccttcccatccaagttgat
tatgatgcatatgatgctcaggttttccggttacctgggccatctcgagtgcaacgaccc
acctctttcaggcctgttcgagagagccacaccaggaaaagttccagctcctatgatgtt
tcgaacagtccgccccatcacagaggggcgctgcttctggaggaggtcaggagtcaggcc
tctgatgacagctctctcgggaagatctccaatattctcctgatcccgcgccctcacctc
caccagtacgaagttagcagctccctgggatacaccagcaccagggatatcctggagcgc
atgattgactcacagcagagagattccagtgcccctggccgttttcacgttggcagtgct
gagtccatgctccatattcggcctggcgggtacaccccccagcgggcactcattaatccg
ttcgccccttcccggatgccaatgaagctaacgtcaaacaggaggaggtggatgcataca
ttcccagtgggtccttctggagaaccgattcagatccaccaccagaccaggcagcatatg
gctgagcttcaggggagcagcctgcaggatcccacacactcctccgcagagctgctggag
ctggcctaccatgaagcgactggaaggcggagcgctgccaagcagatcgctgataaccta
tcattcctggggtgtactggaactgatgaatttgccaccagcccagccagcagccacagt
gcaggcactccactgaaccaggcatcgtcctatgaggatcctaccgccagccgtgaccca
atgcccagtttctgttgcacagtgggtgttgactggaagtcactcaccacacctgcctgc
ttgccactcaccaccgactacttcccggacagacagagccttcagaacgactacacagag
ggctgctacgatctcctccctgagaccgacgtcgacaggagagatgaggacggacctgtg
atgacagcgcagcaggtatttgaggaatttatttgccagcgcctgatgcagggctatcag
atcatcgtccagagcaagaacaggctatcgagcactgcagcctccgcgcctctcagcagc
agccccctctacactcggggtctggtatccaggaacaagctggaggaggaggagaccgcc
ttttggctgagcatgggccgcacttttcataaggtctgcctaaaggacaagatcataact
gtgacccgttacctgcccaagtacccttatgaatcggctcagatccagtacacctacagc
ctgtgcccaccacactccaacacggagtttgtgtcatgctgggtagaattcttacacgag
cggctggaagagtacaagtggaattacctggatcagtatatctgctcgtccggctctgag
gatttcagcctgatcgaatccctgaagttctggaggacgaggttccttctgctcccggcc
tgtgtaacagccaccaagcggatcgtagagggagagagccgctgtgatgtttatggagag
aagctccactcagaccaggaggagtggcagctgctggacggcttcattcgcttcgtagag
ggtctgaaccgaatccggaggcggcatcgttccgacagaatcatccggaaaggggctccc
ataaaaggactgcaggtgaccgggcccctatcgaactatccgactgaaccagcaggtcca
ccccttgggaagaagggaacatcagctctgtccgccttgctggagatggaggccaaccag
aggagctttgaggagcaacaggcagcggtccactcggggaaaggtgctggcccagcctct
gacagcaccccgcactccgtggcaaacgtcgctgtcactcccagccacgttgacagccca
agaaaggttcaaggagaccaggtaccgacaggcacggactatccagattacagcccagct
tcaggaaccactgctccaactggggacaggtccaacacatcgggtaatgcccaagcctca
ggcatgggcatcacacagggcactggagaccaacctcctgcccctgcctcacaagagggc
agcagccagctgtcctctgggattgcaaactcactgacctcctcctcatcgctagcagaa
atactggaaataatgaagcacccctctactggtatccagctgctgccagagcaaagaggg
ctctaccccaactgcttcatcagtgcagaggtagtgcactggcttatcagtaacgtggaa
ggggtgcagacacagttgatggccatcgatatcatgcagaaaatgctggatgagcagctg
attgtccacgccttcggggagtccatgcgaacgtttgtgtacggcttctacttgtacagg
cttgtcaccgacaaagacactgagaaaggaaacctgcagtcctccaccatctggtacacc
tcaacgatggacgacctggctgcattccaacgcaaatggttcgaggtggctttcctcacg
gaagagcggcttcacgtcgacattcccgccttcctgttaccgtggttacccagtaggcca
gcgtcctatgcaagtaggcacagttccttcagccgcagttttggaggacgaagtcaagcg
gctgcattactagctgccacagtccctgagcagaagacggtgaccctcgctgtggatgtc
aataaccgctcagaccatgtcgaatggtgcagctgctattaccatggcaactactcaata
aatgctgcctttgaaatcaagctacactggatggcagtaacatcagccatgctctttgaa
atggtacaaggctggcacagaaaggccacttcctgtgggtttctcctggtccctgtgctt
gaaggtccatttgctctccccagttacctgtacggagaccccctgcggactcagcttttc
atccccctgactatcagctgcttggtgaaggaaggcgcagagcacatctttgatgggttc
gagccggagacctactgggatcggatgcagcttctgcaagaagccattcttgtgaggttt
ggttttgtccaagacaagtacactgcctcagcctttaacttccctgcagagaacaagccg
cagtatattcatgtcacaggtacagtcttccttcagttgccgtactcgaaacgcaagttc
ccaagcggccaacagagacggcgaaggaactccactagctccagcacccagagcctcttc
ggtgaggagagaatcggctacaactgggcctacaacaccatgctcaccaaaacctggcga
tccagtgccactggcgatgagaaattcgccgatcggctgctgaaggactttagcgacttc
tgctccaacaaggacaaccgtctggtcagcttctgggagagctgcctggagaagatgcac
tccagtgcaccctga
DBGET
integrated database retrieval system
