Chiloscyllium punctatum (brownbanded bambooshark): 140487902
Help
Entry
140487902 CDS
T11285
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03030
DNA replication
cpun03410
Base excision repair
cpun03420
Nucleotide excision repair
cpun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140487902 (rfc5)
03410 Base excision repair
140487902 (rfc5)
03420 Nucleotide excision repair
140487902 (rfc5)
03430 Mismatch repair
140487902 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpun03032
]
140487902 (rfc5)
03036 Chromosome and associated proteins [BR:
cpun03036
]
140487902 (rfc5)
03400 DNA repair and recombination proteins [BR:
cpun03400
]
140487902 (rfc5)
DNA replication proteins [BR:
cpun03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
140487902 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
140487902 (rfc5)
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
140487902 (rfc5)
DNA repair and recombination proteins [BR:
cpun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
140487902 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
140487902 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_11
AAA_assoc_2
AAA_22
AAA_14
ResIII
AAA_24
AAA_16
RuvB_N
DEAD
DUF815
ATPase_2
AAA_5
AAA_19
PhoH
AAA_7
AAA_30
Thioredoxin_6
Mg_chelatase
DNAX_ATPase_lid
AAA_2
T2SSE
Motif
Other DBs
NCBI-GeneID:
140487902
NCBI-ProteinID:
XP_072443412
LinkDB
All DBs
Position
17:63149830..63208053
Genome browser
AA seq
333 aa
AA seq
DB search
MATGKEPKSRNLPWVEKYRPQSLDDLISHQDILNTIQRFISEDRFPHLLFYGPPGTGKTS
TILACAKRLYKDKELNSMVLELNASDDRGIDIVRGPILNFSSTRTIFKKGFKLVILDEAD
AMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPEQMIPRLEF
VIKEENVNITPDGLKAIVTLSNGDMRRSLNILQSTNMAYDKVSEETVYTCTGHPLKSDIA
NILDWMLNKDFTTAYRNIMELKTLKGLALHDILTEIHTFVHRVDLPPSVRIHLLIKMADI
EYRLASGTNEKIQLSSLIAAFQVARDMVVAEAE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggggaaggagccgaagagcagaaatcttccctgggtggaaaagtatcggccc
caatctctagatgatcttatttctcatcaggacatactcaatacaattcagcggttcatc
agtgaagatcgtttccctcacctgctattttatgggccgccaggaactgggaaaacatct
accattttggcttgtgccaaacgactttacaaggacaaagagctaaactcaatggtttta
gagctgaatgcctctgatgatcgaggtatcgatatagtacgtggacctatattgaacttc
tccagcacaagaaccattttcaaaaaggggtttaagctcgttatcctagatgaggcggat
gcaatgactcaagatgctcagaatgctctcagaagggttattgagaaatttacagagaac
accagattttgcctaatctgtaactacctgtcgaagatcatccctgctttacagtctcga
tgtactaggttccgatttgggccgctgtcaccagaacagatgattccaagattggagttt
gtcatcaaagaagaaaatgtcaacataactccagatggactgaaagccattgtgacactt
tctaatggtgatatgcgtcgatctttgaatattttgcagagtacaaatatggcatatgat
aaagtgagtgaggaaacagtgtatacctgtactggtcatccattaaaatcagacatcgca
aacatccttgactggatgttaaacaaagacttcaccactgcatacaggaatatcatggaa
ttaaagacattaaaaggtttagccctgcatgatattctgaccgagatccatacttttgtg
cacagagttgatttgccaccttcggttcgaattcatttattgatcaagatggctgatatc
gagtacaggctggcttcaggaacaaatgagaaaattcaactgagttcacttattgctgca
tttcaagttgcccgtgatatggttgttgccgaagctgaatga
DBGET
integrated database retrieval system
