Chiloscyllium punctatum (brownbanded bambooshark): 140488159
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Entry
140488159 CDS
T11285
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03030
DNA replication
cpun03410
Base excision repair
cpun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140488159 (pole)
03410 Base excision repair
140488159 (pole)
03420 Nucleotide excision repair
140488159 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpun03032
]
140488159 (pole)
03400 DNA repair and recombination proteins [BR:
cpun03400
]
140488159 (pole)
Enzymes [BR:
cpun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
140488159 (pole)
DNA replication proteins [BR:
cpun03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
140488159 (pole)
DNA repair and recombination proteins [BR:
cpun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
140488159 (pole)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Spidroin_N
Motif
Other DBs
NCBI-GeneID:
140488159
NCBI-ProteinID:
XP_072444101
LinkDB
All DBs
Position
17
Genome browser
AA seq
2282 aa
AA seq
DB search
MVLQNSGKLRADRQPVADTSYSEDGSSLPALKRLERSQWTDEMDARFRFDRLKDPGEKTG
WLINMHPTELLDEDKRMISAVDYYFIEEDGSRFKVALPFEPYFYVATKKGCEREVSSFLS
KKFQGKISKISTIPKEDLDLPNHLVGLKRLYVQLAFNTVDDLIKVRKEISSAVKKNKERE
KSNDAYTVMLSSALAGGNVTEEEGTSKKISDQMENIIDIREYDVPYHVRVSIDLKIQVAH
WYNIRIRGGAYPPEIIRRDDLVERPDPVVLAFDIETTKLPLKFPDAENDQIMMISYMIDG
QGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEASLIRRWFEHLQETKPNILVTY
NGDSFDWPFVEARAAVHGLNMYKEIGFQKDSQGEFKASQSIHMDCYRWVKRDSYLPVGSQ
NLKAAAKAKLGYDPVELDPEDMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALC
TIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTNDGHVLDSETYVGG
HVEALESGVFRSDIPCRFKMNPAAFDFLLQRVELTMRHAIEEEEKLPMDQVTNFQEVCDE
IKKKLNCLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPGAF
CQRKMTWTWRGEFMPASRSEYHRIQQQLESEKFPPTFPNGQPQAFHELSREEQAKYEKKR
LADYCRKAYKKIHITKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGSHKVWKKKLSAA
IESGDATEIKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCHTGANI
ITQARELIEQIGRPLELDTDGIWCVIPNSFPENFVIKSNNPKKPKVTISYPGAMLNILVK
ERFTNEQYQELVDPASLTYVTRLENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNED
GSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKAA
NMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFVISK
KPEGAPVTERAIPLAIFQAEPSVKKYYLKKWLKNPSLQDLDIRLILDWDYYIERLGSAIQ
KIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKISELFTNTGVRQVTCNQHLV
KDQQSQISDLEDFGVPKRRAQPVIPLSTKRRRGMNDESQEQSQDLELTQSWREILGPPPP
LGKTKDERLVWLRYQKKKWELQSKQRKARRKRRKLDDGADAPGRPIRDGPTTSLGSFLRR
TARTILDMPWQIVQIAETSQPGIFKLWAVVGHDLHCIKLNVPRVFYVNQRIPKADDSAVY
KKVNRILPRSNIVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQIPLLFRALIQL
GCICMVNRQLSPHLIGREVDTFELEQLEMRSLAQFNYLEPGSIRHIYFYHNAQGNKALFG
LFIPSQRKASVFVLDTVRSNQMPNLNNLYTSERTAMLEKLDEELLPPDKHTFEVQAEKDP
KLIYRAIQRLLLSYKDEKRGPTLIAVQSKWQLKRLTNGMSVFDEFPLVPVHVNDDINYGV
LDWQRHGVRRMIRHYLNLDSILSKAFEMARYYHIPIGNLPDDISTFGSDLFFSRHLRRHN
HLLWLSPTSRPDLGGKEADDNRLVMEFDEKSTVEINNPGCYSTVSVELDIQSLAVNTILQ
SHHINDMEGASSIGISFDVIQQASLEDMMAGNQAANALASYDEAALCSNTFRILKSMVVG
WVKEITHYQNVYADNQVMHFYRWLRSPSSLLYDPALHRILHNMMKKLFLQLVAEFKRLGS
SVIYANFNRLLLCTKKRRIEDSMGYVEYITKSIHSREIFHSLSISFSRCWEFLLWMDPAN
YAGIKGKLSSSILIGEVESNKGTKENVEDDSNDDEEIHSEDEETGTDVEDLLDNNWNIMH
YLPQASSCQSYFLMIVSAYIVAVYHSMKEELRRSAPGCTPIKRRGTSQISQEPAGESGAS
AGMITFSQEYVSNELTHNFFTITQKILKKVSSNRHATEPSEMFPVLPGSYLPFNNPALEF
IKSVCKILSLDSNITNQVNKLKRDLLRLIDVGEFSEEAQFKDPCQSYILAEVICKNCNFC
HDLDLCKDPSILQDGAVLPKWCCTNCQTEYDSDSIEIELVEALKKKMMAYTLQDLVCSKC
KGIKEANMPVYCTCARDFDLTISIKGFTEQIQVFRNIARHYSMPFLLETVDWMFRMNTHL
RP
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atggtgctccagaacagtgggaagctgagagcggacagacagccggtggccgacaccagt
tactctgaggatggctcctcccttcctgcactcaagcgcctggagcgcagtcagtggaca
gatgagatggatgcacgatttagatttgaccgtctcaaagatccaggcgagaagactggc
tggcttatcaacatgcacccaacagaactcctggatgaagataaacgaatgattagtgct
gtggattattattttattgaagaagatgggagcagatttaaggttgctctaccttttgaa
ccctatttctatgttgccacaaaaaagggctgtgaaagagaagtttcatcattcttgtcc
aaaaaatttcaaggcaaaataagtaaaatatcaaccattccaaaagaggacttggatctg
cctaaccacttggttggcttgaagagactctatgttcagctcgcttttaatacagttgat
gatctgatcaaagtccgaaaggagatttcctctgctgtaaagaaaaataaagaacgggag
aaatcaaatgatgcctatactgttatgttatccagtgccttggctgggggcaatgtgact
gaagaggaaggaacatcaaaaaaaatttctgatcaaatggaaaacataattgacatccga
gaatatgatgtcccttatcatgttcgagtctctattgatttgaagattcaggtggcgcat
tggtacaatatacgaattcgtggcggtgcctatcctcctgagattatacgtcgggatgac
ttggttgagcgaccagatcctgttgttttggcatttgatattgagactacaaaattgcca
ttaaagtttccagatgctgagaatgaccagattatgatgatttcctacatgatcgatgga
cagggctatttgattacaaacagggaaattgtgtctgaagatattgaggattttgagttt
acaccaaagccagaatatgagggccctttttgtgtttttaatgaaccagatgaggcaagc
ttaattcgtaggtggtttgaacaccttcaagaaacaaagcctaacatacttgtgacatat
aatggtgattcttttgattggccttttgtggaggcacgagctgctgtgcatggtttgaac
atgtacaaggagattggctttcagaaggatagtcagggcgagttcaaagctagtcagagc
attcacatggactgctacaggtgggtgaaacgagacagctacctccctgtaggtagccag
aacttgaaagctgcagctaaagccaaactcgggtatgaccctgtggaattagatcctgaa
gatatgtgtcgaatggccactgaagaaccacagactttagccacatactcagtgtctgat
gctgtggctacctattacatgtacatgaagtatgtgcaccccttcatttttgccttgtgt
acaatcatccctatggaacctgatgaggtgctcagaaaaggttctggaacgctttgtgag
gcactcctcatggtgcaggcttttcatgccaatataatcttcccaaacaagcaggaacaa
gtctttaataaactaacaaacgatggtcatgtgcttgattcagagacttacgtaggagga
catgtggaggctttggaatcgggagtttttcgtagtgacataccatgccgatttaaaatg
aacccagcagcatttgatttcttgctgcaaagagtggagcttaccatgcgacacgccatt
gaggaagaggagaaacttcccatggaccaggttactaatttccaagaagtctgtgatgag
attaaaaagaaactgaactgtttgaaggaagttcctaacaggattgaatgtccactcatt
taccacttggatgttggggcaatgtacccgaacatcattctgaccaatcgtttgcagcct
tctgccattgtggatgaagcgacctgtgcagcctgtgatttcaacaaaccaggtgcattc
tgccaacgcaagatgacctggacatggcgaggagagtttatgccagcctctcgcagtgag
taccatcgtattcaacagcagcttgagtctgagaagttcccacctactttcccaaatgga
caaccacaagctttccatgaattatcccgtgaagagcaagccaagtatgaaaagaaacga
ttggcagattattgccgcaaagcttataaaaaaatccatattaccaaagtagaggaacga
gtaactacgatttgccaacgtgaaaattctttctatgtagatacagtacgagcttttcgt
gaccgacggtatgaatttaagggttcacacaaggtttggaagaaaaaattgtctgctgcc
attgaatctggagatgctacagaaatcaagcgttgtaagaacatggaaattttgtatgag
tctctgcagctggctcacaagtgtattctaaactccttctatggctatgtcatgcgtaaa
ggggctcgttggtattccatggaaatggctgggattgtctgtcacactggagccaatatc
atcacacaggccagagaactgattgaacagattggacgacccttagagctggatactgat
ggtatttggtgtgtcattcctaattctttcccagagaactttgtcatcaagtcaaacaat
cctaaaaaacccaaggttacaatctcttaccctggtgcaatgcttaatatcctagtgaag
gaacgattcacaaatgagcagtaccaggagttggtggaccctgcatcgttgacttatgtc
acccgcttagaaaacagcatattctttgaggttgatggtccttatctggctatgattctg
ccagcttccaaagaggaaggaaagaagctcaaaaaaagatatgcagtgtttaatgaggat
ggctctctggctgaactaaaaggctttgaagtgaagcgacgtggggaattgcagctcatt
aaaatttttcagtcttctgtctttgaggcctttctgaaaggtaccacgctggaggaagtg
tatgcatctgttgctaaggtagcagattactggttggacgtattatacagcaaggcagct
aatatgcctgactccgagctatttgaattgatctctgagaatagatcaatgtcacgtaaa
ttagaggattatggagaacagaagtctacctcaataagtactgccaaaaggcttgctgaa
tttcttggggaccaaatggtgaaggacgcagggctgagctgccgttttgtcatctccaag
aaacctgagggtgccccagtcactgaaagagcaattccactggccattttccaggcggaa
ccaagtgttaaaaagtactatctgaagaagtggttgaagaatccttcattacaggacctg
gatattcgattaattctggactgggattattacattgagcgacttggcagtgccatccag
aagattatcactatcccagcagcccttcagcaggtaaagaatccagtcccacgagtccga
caccctgactggcttcacaagaaacttttggaaaagaatgatgtttacaaacaaaaaaaa
attagtgaactattcactaacactggagtcaggcaggtgacatgtaaccagcatctggtg
aaagatcaacaatcacaaattagtgatttagaagattttggtgttcccaagcgcagagca
cagccagttatcccactcagtacaaagcgaaggcgtggtatgaatgatgagagccaggaa
caatctcaagacctagaattaacccaatcttggagagagatactgggtcctccaccacca
ttgggaaagacaaaggatgaacggttagtgtggctgaggtaccagaagaagaagtgggag
cttcagtcaaagcaaagaaaggcacgtcgaaagagaagaaagcttgatgatggtgcagat
gcgccaggtagacctattcgagatggtcccacaaccagtcttggcagctttttgcgtcga
actgcccgtaccattcttgacatgccatggcaaattgtacagattgcagaaacaagtcag
cctggcatcttcaaactgtgggctgttgttggacacgatttgcattgcattaaactcaac
gttcctcgagtattctatgtcaatcagcgcatccctaaagcagatgatagcgctgtttac
aagaaagtcaaccgcattcttcctcgttccaatattgtttataacctatatgaatattct
gtaccagaagacatgtatcaggagcacatcaatgaaattaatgctgacctctctgctcca
gacattgagggagtctatgaaacacagattcccctgctctttcgtgccctcatccagctt
ggatgcatctgcatggtgaataggcaattatcacctcaccttataggacgagaagtggac
acctttgagttggaacaactggaaatgcgttcattagcacaatttaattatctggaacca
ggtagcattcgacatatttacttctaccacaatgcccaagggaataaggctttatttggc
ttgttcatcccctctcaaaggaaggcttctgtatttgttcttgacactgtgcgcagtaat
caaatgccgaatttgaataatctatatacatctgaacgcactgctatgctggagaaatta
gatgaagagctgctgccacctgataagcacacatttgaagttcaggcagaaaaagaccca
aagttaatctacagagcgattcagcgtcttttgctgagctataaggatgagaaaagagga
ccaactctcattgcagtgcaatcaaagtggcagctaaagaggctgacaaatgggatgtca
gttttcgatgagtttccattggtgcctgttcatgtaaatgatgatattaattatggtgta
ctggattggcagcgccatggtgtccgcagaatgatcagacactatctcaacttggatagt
attttgtccaaggcttttgagatggccaggtattatcatattcctattggaaatcttcca
gatgacatctcaacctttgggtcagacctcttcttttccaggcatcttagacgacataac
catctgttgtggctttctccaacatcacgacctgatctgggaggaaaggaagcagacgat
aatcgcctggttatggaatttgatgagaagtcaacagttgagatcaataatccagggtgt
tactccacagtttctgtggagctggatattcagagcttggctgtgaataccatccttcag
tcccatcacattaatgatatggagggggcatccagtattggtatcagcttcgatgtaatc
cagcaagcttccctcgaagacatgatggctggtaatcaggcagctaatgcactcgccagc
tatgatgaggcagctttatgctctaacactttcagaattttgaaaagcatggttgttggc
tgggtgaaggagatcactcactatcaaaatgtttatgctgataaccaagtgatgcacttt
tatcgttggctgcgatcaccttcttcactgctatatgatcctgcactacatcgtattctc
cataacatgatgaagaagctgtttcttcagctggtagcagaatttaaaaggttgggttca
tctgtcatctatgctaacttcaaccggctactgctatgcaccaagaagcgccgaattgag
gattctatgggatacgtggaatacatcacaaagagcattcattcccgtgagattttccac
tccctctccatctcgttttctcgctgctgggaatttctgctttggatggacccagctaat
tacgctggcatcaagggtaaactttcctccagtattctcattggagaggtggagagcaat
aaaggaacaaaggaaaatgttgaagatgacagcaatgatgacgaagagattcattctgaa
gatgaggaaactggcactgatgttgaagaccttttagacaataactggaatatcatgcat
tatctgccgcaagcatcatcttgtcagagctacttcctcatgattgtctcagcttatatt
gtagctgtgtaccacagcatgaaggaagaactaagacgcagtgctccagggtgtactcct
ataaaacggcgaggcacaagccaaatctcacaagagccagcaggcgaatcaggagcttct
gcaggaatgattaccttctctcaggagtatgtgtctaatgagctcacacacaactttttc
accatcactcaaaaaattctgaagaaagtgagcagcaatagacacgccactgagccctcc
gaaatgttcccggttctgccaggctcctatcttccattcaacaaccctgcactggaattc
atcaaatcagtctgtaagatcttgtccctggattcgaatataaccaaccaggttaataag
ttgaaacgtgatcttttacgtctaattgatgtaggggaattctctgaggaagctcaattt
aaagacccctgccagtcctacatactagctgaggttatctgcaagaattgcaacttctgc
catgacctggacctttgcaaagatccttccatcttgcaggatggtgctgtactacccaag
tggtgctgcacgaattgccagactgaatacgactcagattctatagaaatagaattggta
gaagcactgaagaagaaaatgatggcctatacccttcaggatctggtttgttcaaaatgt
aaaggcatcaaagaagccaacatgcctgtttattgtacttgcgcccgggactttgatttg
accatttccataaagggatttacggaacaaatccaagtatttagaaatattgccagacac
tacagtatgccattcttgttggagactgttgattggatgtttagaatgaatacacaccta
aggccatga
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integrated database retrieval system
