Chiloscyllium punctatum (brownbanded bambooshark): 140488172
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Entry
140488172 CDS
T11285
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpun03041
]
140488172 (tfip11)
Spliceosome [BR:
cpun03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
140488172 (tfip11)
Other components
Complex C specific factors
140488172 (tfip11)
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
DUF1281
Motif
Other DBs
NCBI-GeneID:
140488172
NCBI-ProteinID:
XP_072444134
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Position
17:97370725..97407926
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AA seq
830 aa
AA seq
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MSMSHLYGKGQDDDEVEMERFEISDWDLENEFNPDRVRHRQTKEDAIYGMWAENDSDDER
PSFGGKRSKDYSAPVNFISAGIRRPAAEENAEDKDSDDSEEEKVKREEFPKEFAPKKLKT
GGFFKSSSKGFTGGHRTNQEIGTWEKHTKGIGQKLLQKMGYVPGRGLGKNAQGIVAPIEA
KMRKGKGAIGAYGSERTEQSLKDFPIVDSDEEAEEEFQKEMSQWRKDPAGGKKKPKYTFK
TVEELKAKGASALGKKMATPQTELSQVKVIDMTGKEQKVYYSYSQMNQKHDIPDDTQSPV
KDAKSEGFSLPELEHNLQLLIEMTEQEIIQNDRQLQYERDMVVNLSHENEKLSEILAHED
KIIDKLSSILQIVEDCEKRLQPNCENPLTLEECAKIFEMLQEKYFEEYKMFDLAELSIAI
VFPLLKEFFKTWNPLQDNTYGLDVMSKWRKLLERDQLQHGGCDMLSLDPYHRLMWEVWMP
CVRNVVSQWLPRNCAPMVDFLENWMPAVPLWILDNILEQLIFPKLQREVENWNPLTDTVP
IHAWIHPWLPLMQMRLEPLYSPIRNKLSNALQKWHPSDSSAKLILLPWKNVFTPGSWDAF
MLKNIVPKLGMCLTEFVINPHQQHMDTFHWVMDWEDMISASSLIGLLEKNFFPKWLQVLC
SWLSNSPNYEEVTKWYLGWKSMFSDQVLAHPTIKEKFNEALDIMNRAVTSTVGGYMQPGA
RENIAYLTHTERRRDFQYEAMQERREAENLAHRGIGVSSASIPMNFKDLIQAKAEEHNIV
FMPLMGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtcacatctttacgggaagggccaggatgacgacgaggtggagatggagcgg
tttgaaatttcagattgggacttggaaaatgagttcaatccagaccgcgtacgccatcgg
cagacaaaagaggatgccatctacggcatgtgggctgagaatgattctgatgatgaaagg
ccaagctttggtggaaaacgttccaaagattacagtgctccagtgaatttcatcagtgct
ggaatccggcgacctgcagctgaggaaaatgcagaagataaggattctgatgattctgaa
gaagagaaagttaagcgagaagaatttccaaaggaattcgccccaaagaaattgaaaact
ggtggctttttcaaatctagttcaaaaggattcacaggaggacatcgaacaaaccaggaa
attggcacctgggaaaaacataccaaagggattggacagaaattactgcagaagatgggt
tacgtacctggcagaggtcttgggaaaaatgcacaaggaattgtggcaccaattgaagca
aaaatgagaaaggggaaaggagcaattggtgcttatgggtctgaacgaacagagcagtca
ctgaaggattttcctattgtcgattctgatgaagaagcagaagaggagtttcagaaggag
atgagccagtggcggaaggatcctgcaggtgggaagaaaaaacccaaatataccttcaag
actgttgaagagcttaaagcaaaaggagcatctgctctgggcaagaaaatggctacacca
cagacagagctctcacaagtaaaggttatagacatgacaggaaaggagcagaaagtctat
tacagttacagccagatgaaccagaagcatgatattcctgatgacacacagtctccagtt
aaagatgcaaagtcagaaggcttttctctccctgagctcgaacacaatctgcaactgctc
attgaaatgaccgagcaggagatcatccagaatgaccgtcagctgcagtatgagagggac
atggttgttaacctctcccatgagaatgagaagctgtctgaaatccttgcccatgaggat
aagatcatagacaagctcagcagcatcttgcagattgtggaggactgtgagaagagactg
cagcccaactgtgaaaatccactgaccctggaggagtgtgcaaaaatttttgaaatgctc
caggagaaatattttgaggaatacaagatgtttgacttagcagaactctccattgccata
gtatttccactgctgaaagaattctttaagacatggaatcctttgcaggataacacgtat
ggtttagatgtcatgtctaaatggaggaaacttctagaacgagatcagctgcagcatgga
ggatgtgacatgttgtcgttggacccttaccacaggttgatgtgggaagtatggatgcca
tgtgtccgtaatgttgtatcccagtggctgccccggaattgtgctccaatggtggatttc
ttggagaactggatgccagcagtacctctctggatattggacaatattcttgaacagctg
atttttcccaagttgcagcgtgaggttgagaactggaatccactgacagacacagtccca
atccatgcctggattcacccctggcttccattgatgcagatgcgcctggagcctctgtat
tcgccaatccgcaacaagctttccaatgcattgcagaaatggcatcccagtgactcgtct
gcaaaactgatcctattgccatggaaaaatgtgttcacaccaggatcctgggacgccttc
atgctgaaaaatattgttccaaagttagggatgtgtttgacagagtttgtgattaatcct
caccaacaacacatggacacgttccattgggtgatggactgggaggacatgatctcagct
tccagcctcataggattgcttgagaaaaactttttcccaaagtggttacaggtgctgtgt
tcttggctgagtaatagtcccaattatgaagaggtcactaaatggtatttgggatggaag
tccatgttttctgaccaggtattggcccaccccacaatcaaggagaagttcaatgaagct
ctggacattatgaaccgggctgtcacctccacagttggtggttacatgcagccaggagct
cgggagaacattgcctatcttacccacacagagcgccggagagactttcagtacgaggca
atgcaggagcgccgtgaggcagagaatctggcacaccgcggcattggggtcagctctgcc
tccataccaatgaacttcaaggacttgatccaggcaaaggctgaagagcacaatattgtc
ttcatgcccttgatggggaaacgtcatgagggcaaacagctctacacctttggtcggata
gttatttacattgacagaggggttgtgtttgtgcagggggagaaaacctgggtgccaaca
tcacttcagagcctcattgacatggctaaataa
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