Chiloscyllium punctatum (brownbanded bambooshark): 140489328
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Entry
140489328 CDS
T11285
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K16360
netrin-G3 ligand
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04514
Cell adhesion molecule (CAM) interaction
cpun04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
140489328 (lrrc4ba)
04517 IgSF CAM signaling
140489328 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpun04515
]
140489328 (lrrc4ba)
Cell adhesion molecules [BR:
cpun04515
]
Immunoglobulin superfamily
NGL family
140489328 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
ig
V-set
LRR_9
Ig_2
VEGFR1-3_N_Ig-like
LRRNT
LRR_LRWD1
LRR_RPS2
Ig_MYOM1
Calcyon
Sp38
LRR_6
DUF3139
Motif
Other DBs
NCBI-GeneID:
140489328
NCBI-ProteinID:
XP_072444856
LinkDB
All DBs
Position
18
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AA seq
653 aa
AA seq
DB search
MGAMMMMMMKAHHTQRMRFNLGRTVCHLAFLTFWTLSLLTGLVQSHICPKGCSCSNQFSK
VICTRFELREVPDSISTNTRYLNLQENIIQVIKADTFKQLRHLEILQLSKNLIRQVEVGA
FNGLTNLNTLELFDNRLTTVPSAAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKKLEYISDAAFEGLINLRYLNLGMCNLAEIPNLTPLIKLEELELSGNRLEVIQPGSF
QGLTNLRKLWLMHAQIQLIERNAFDDLQSLEELNLSHNNLTSLPHDLFTPLHRLERVHLN
HNPWHCNCDVLWLSWWLKETVPSNTTCCARCHSPPNLKARYIGELDQSHFTCYAPVIVEP
PTDLNVTEGMAAELKCRAATSMTSVNWMTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQ
DTGLYTCLVSNSAGNATASATLNVSAVDSSNSYSYFTTVTVETVEVVDEPRSTEREPGPT
PSGHWETPYSTTSLTPRSTKSTEKAFTVPITTEVTDNIMAGLDDVMKTTKIIIGCFVAIT
FMAAVMLIIFYKLRKQHQLHKHHGQTRTIEIINVEDDMAEATPGDSCLTLPAVDHEHLNH
YTAYKAHYNNNTTTTGSGGGGALNCTKNPLHNSVHEPLLFKSSSKENVQETQI
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgatgatgatgatgatgatgaaggcacatcacacgcagaggatgagattcaac
ttgggcaggactgtttgccatctcgcgtttttgaccttttggactttgtcactgctgact
ggactggtccagtctcacatctgccccaagggctgctcctgcagcaaccagttcagcaag
gtgatctgcacaaggtttgagctgcgagaagttcccgacagcatctccaccaacacccgc
taccttaacctgcaggagaatatcatccaggtcatcaaggcggataccttcaagcaacta
cggcacctggagattctgcagctcagtaagaacctgatccgtcaggtggaagtcggagcc
ttcaatggcctcaccaacctcaacacgctggagctcttcgacaaccggctcactacggtg
cccagtgcggcttttgagtatctgtcaaaactccgggaactgtggctgaggaacaatccc
attgagagcatcccttcctacgccttcaaccgtgtgccctcgctgcggcgcctggacctg
ggtgagctgaagaagctggagtacatttcagacgcggcttttgagggcctgatcaacctg
aggtacctcaacctgggcatgtgcaacctggcggagatcccgaacctcacgccactcatt
aagctggaggagctggaattgtctggcaaccggctggaggtcatccagcccggctccttc
cagggcctcaccaacctgcgcaaattgtggctgatgcatgcccagatccaactgatcgaa
cgcaatgcctttgatgacctgcagtcactggaggagctcaatctgtctcataacaacctg
acatcactgccgcatgacctcttcacacctttgcaccggctggagagggtgcacctcaac
cacaacccttggcactgcaactgcgatgtcttgtggctcagctggtggctgaaggaaacg
gtgcccagcaacacaacctgctgcgcacgctgccactcgccgcccaacctgaaggcccgc
tacatcggtgagctagatcagagtcattttacgtgctacgcaccggtcattgtggaacca
cctaccgacctcaacgtgactgagggaatggctgccgagctcaagtgccgtgcggctact
tccatgacgtccgtcaactggatgacccccaatggcactctgatgacccatggctcatac
cgggtacgcatctcagtgctgcatgacggcacgctcaatttcaccaatgtgacagtgcag
gacacaggcctgtacacctgcttggtcagcaattcagctggcaatgccacagcctcagcc
acactcaatgtctcagctgttgacagcagcaacagttacagctatttcactaccgtgacg
gtggagacagtggaggtggtggatgagccccggtcgactgaacgcgagcctgggcccacc
ccctccggccactgggagacaccctattccaccacctccctcaccccccgtagcaccaag
tccaccgagaaggcctttactgtgcccatcaccaccgaggtgacagacaacatcatggcg
ggtctggacgacgtgatgaagacgaccaaaatcattattggctgttttgttgccatcacc
ttcatggctgctgtcatgcttatcatcttctataagctgcgcaaacagcaccagctccac
aaacaccacgggcagacccgcaccatcgagatcatcaacgtggaggacgacatggcagag
gccacacccggtgacagctgcctgactctcccggctgttgaccatgagcacctcaaccat
tacacggcttacaaggcccactacaacaacaacaccacaaccactggcagtggaggcggc
ggcgccctgaactgcaccaaaaacccgcttcacaactctgtgcacgaaccactactcttt
aaatccagctccaaagagaacgtgcaagagacgcagatttaa
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