Chiloscyllium punctatum (brownbanded bambooshark): 140490881
Help
Entry
140490881 CDS
T11285
Name
(RefSeq) synaptopodin-2-like isoform X1
KO
K24066
synaptopodin-2
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
140490881
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpun04990
]
140490881
Domain-containing proteins not elsewhere classified [BR:
cpun04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
140490881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
Pept_S41_N_bact
DUF7037
Motif
Other DBs
NCBI-GeneID:
140490881
NCBI-ProteinID:
XP_072445251
LinkDB
All DBs
Position
1:33628787..33758959
Genome browser
AA seq
1283 aa
AA seq
DB search
MGIGDYICVTISGGAPWGFRLQGGKEHKQPLQISKVRKKSKACRAGLCEGDEMISINGKP
CSELTHSEAMQLIDGTSENLQILIKRPISEKADQPEYEDYEGTKRHETVESRMQVGDSKT
SCKHGLPFELYISESQDEAYYGETESDTDVMGKKEGNQRQNVSSLLLKECATSGESRQDP
KWKEKRGAQHTAMVELQLSLTQGKLGDPETTAITVIGAEKIPSAAREPTTLYESIQKTES
AATETNGNVTTQTTISHQNRSDKKVKLVESELQGTEADSYQSRVELSLDSSDREHSGREA
STSEVGSACADSLAEDGQSKTRSNPPFLVGISSEGTEPGSEGTRSGKDSTRTHKHRARQA
KIRRSESLSEKQVKEAKSKCKSIALLLTATPTPSSKGALMFKKRRQRAKKYTLVSYGTGE
FDPDDDQEDSIEFALVPTSDSDLDEDFCADVNSAQVVTFDWDTGLVEVEKKEKTEDEMQR
LPESKGKGALLFAKRRQRIDQFTAEQEEMRRTGANETVSTHTVETENLYQTTKSGLHDSS
NTIQNHATENYIDVSKLHGTENVQGGKGRSEMVIQNSKSAETNRAGAMNRTAIPFPGVQN
RAAAPFSPTRNVANSLSNVPPPPPYSSISPPPDNIHRIASPPLASVAQPAKWSPMGIAGE
QIASRDERICVPAIKTGILQDARKRNTTKPMFTFVDRPKVAPNPELLSMVKGKTDRRRGV
DQPGGGFESGPEEDYLSLGAEASNFLQTPAVKQKKPPPVAPKPFVKSPPTGPNPTLPPLS
PTEVTSAQAPIHSSKSAKQMPVKLHSVQPVNTWYQPHGSANQFVSSTGPQSVTSTHSYPS
KMPPTTPIANSATAGGMGPAYEMPALKGKGAQLFARRQSRMEKYVVDSSTVKARQARSSS
PTPSMPASWKYSSNIRAPPPLAYNPIHSPSYPPGILKAQAQSASSSKPNKGAKGKGTKKP
LNALDVMKHQPYQLNSSLFTFSSTPDAKTPLSTSSSLSKQSIKSDPVPLQPVNATYPISK
SVSSVSTGPSFNQANTATADEEHIYSSGKNAFVPPSYASYPKQESSALSVAMAPRPKFSA
KKVGVTAQAQSKGFQPVQVPEKPSQYNYSHGLSGAQAMKQPATPPSGRPASQSEKIAKKK
LTPWDAASQSAVGSVEEAFSRSNIQESIAKNIVSAARRKTLPEPPEEWKARVAYVPPLPS
GYSSIAAFQVRRPSSISSSVKTTASIPTSISQQSSIYKQPLNYQQSLTGSDLSTGTCSEH
ETSGKQGADPNYNPYPRGWKKQR
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgggcattggggattacatctgtgtcacaatcagtggtggagcaccctggggattcaga
ctgcaaggtggcaaggagcacaagcagccattacagatttcaaaggtccggaagaagagt
aaggcctgcagagctggattatgtgagggagatgaaatgatctcaatcaacggtaaacct
tgttcagaattaacccattcagaagccatgcaactgattgatgggacaagtgaaaatcta
caaatcctgattaaaaggcctatcagtgagaaagctgatcagccagaatatgaagattat
gaaggaacaaagaggcacgaaacagttgaaagcaggatgcaagttggtgacagtaaaaca
tcttgcaagcatggccttccttttgaactttacatctcggagtctcaggatgaggcttac
tatggggagacagagagtgacacagatgttatgggcaagaaagaaggaaaccagagacag
aacgtctctagcttgcttttgaaagaatgtgccacttctggagaatcccggcaggaccct
aaatggaaggagaagagaggtgcccaacatacggccatggtggagctccagttgtccctg
actcaaggaaagcttggtgatccagagacaactgctattaccgtcattggggccgaaaaa
atcccttctgcagccagagagccaaccacactgtatgagagtatccagaaaactgaatca
gcagcaacggaaactaatggaaatgttacaacccagactactatatcacaccagaacagg
agtgacaaaaaggtcaagctggtcgaaagtgagctgcaaggaacagaagcggattcatat
cagtctcgggtggagctgtctttggattcctcggacagagagcatagtggaagggaagcc
tccacgtctgaagtcggtagtgcatgtgctgactcgttggctgaagacggacagtcaaaa
acacgtagcaaccctcctttcttggttgggatttcatcagagggaacagagcccggatca
gaggggacacgctctgggaaggattctacaagaacacacaaacaccgagctaggcaagcc
aaaattcgacggagtgaaagtctgtcagaaaaacaggttaaagaagccaagtcaaagtgt
aaaagcattgccttgctcctgacagcaactcctacccccagctccaagggggcgttaatg
tttaagaagcgtcgccagagggcaaaaaagtatactttagtcagctacggcactggggag
tttgatcctgacgacgatcaagaagactccatagaattcgctctggtaccaaccagcgac
tcagatcttgacgaggacttttgtgctgatgtcaactcagctcaggttgtgacgtttgac
tgggacacaggtttagtggaagttgaaaagaaggagaagacagaggacgaaatgcagaga
ttaccagagagcaagggcaaaggtgcgttgttgtttgccaagaggaggcaaaggattgat
caattcacagctgagcaagaggaaatgaggagaacaggagcgaatgaaactgtctccact
cacactgtagagactgaaaatctttaccaaacaacaaaaagcggtttacatgattcatca
aacacaatacaaaatcacgccactgaaaattatattgatgtaagtaagttgcatggaacg
gaaaatgtacaaggagggaaagggagatctgaaatggtgatccagaactcaaagtctgct
gaaaccaatagagcaggtgcaatgaacagaacagcgataccatttcctggtgtgcaaaat
cgagctgcagctcccttctctcctacaagaaatgtggcgaattccttgtcaaatgtacct
ccccccccaccctattcttccattagtccaccacctgacaatatccatcgcattgcatct
cctcctttggcatccgtggctcaaccagccaaatggtcaccaatgggaattgcaggagag
cagatagcctccagagatgagagaatctgtgtaccagcaataaaaactggcattttacaa
gatgcaagaaaacggaacactacaaaacccatgtttacatttgttgaccgtcctaaggta
gctccaaatccagaactcctgtcaatggtcaaaggtaagacagaccgacgtagaggagta
gatcagcctggtggaggttttgagtcaggacctgaagaagattaccttagtttaggtgca
gaagcatcaaattttttacagacaccagcagtaaagcagaagaaaccacctccagttgca
ccaaagccatttgttaagagccctcctactgggccaaacccaacattacctccgttatca
cctacagaagtcaccagtgctcaagctccaatccattcttctaagagcgctaagcagatg
cctgtaaaattgcattcagttcaacctgttaatacatggtaccagccccacggttctgct
aaccagtttgtatcttcaactggaccccaatcagtaacatcaacacattcatatccttca
aaaatgccacccacaactcccatagcaaattctgcaactgctggaggtatgggtccagcc
tatgagatgccagctttgaaaggtaaaggagcacagttatttgcaaggagacaatcccgc
atggagaaatatgtagtagattcatcaacagtcaaagccagacaagcacggtcatcatcc
cccaccccttccatgccagcatcttggaagtattcatctaatataagagcacctccccct
ttggcttacaatcctattcattctccatcttatcctcctggcattttgaaagcgcaagca
caatctgcatcttcatctaagccaaataaaggtgccaaaggtaaaggcactaaaaaacct
ctcaatgctttggatgtcatgaagcatcaaccatatcagcttaattcatctttattcact
ttttcatccactcctgatgctaagacacctctgtccacaagctcatcactttctaagcag
tctataaagtctgatcctgtcccacttcaaccagttaatgctacatatcctatttctaag
agtgtctcatctgtgtcaacaggaccatctttcaatcaagctaatacagctactgctgat
gaggagcatatctattcttctggaaagaatgcctttgtacccccaagttatgcatcatat
ccaaagcaagaatcaagtgctttgtcggttgccatggcaccaagaccaaagttttcagca
aagaaagtgggcgttacagcacaggcgcagtcaaaaggcttccaacctgtacaagtacca
gaaaaaccatcacaatacaactattctcatgggctttctggagcacaagcaatgaaacag
ccagcaaccccgccatctggaagaccagcatcccagtcagagaaaattgcaaagaaaaaa
ctgaccccatgggatgctgcatcacagtctgctgttggttcagtcgaggaagcattttcc
aggagcaatattcaggagtcaatagcaaagaatattgtgtcagcagcccgccgaaagaca
ctaccggagcctccagaggaatggaaggcacgagtagcctatgtaccaccacttccaagc
ggttactcatctattgctgctttccaggtcagaagaccatcgagcatatcatcctcagtc
aaaactacagcatcaattccaacatctatcagccaacagagttcaatatataaacagcca
ctaaattatcagcaatcactgactggttcagatctatctactggcacatgctctgaacat
gaaacttcaggaaagcagggagctgatccaaattataacccttatccacggggctggaag
aaacaaagatga
DBGET
integrated database retrieval system
