Chiloscyllium punctatum (brownbanded bambooshark): 140491322
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Entry
140491322 CDS
T11285
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03030
DNA replication
cpun03410
Base excision repair
cpun03420
Nucleotide excision repair
cpun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140491322 (rfc2)
03410 Base excision repair
140491322 (rfc2)
03420 Nucleotide excision repair
140491322 (rfc2)
03430 Mismatch repair
140491322 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpun03032
]
140491322 (rfc2)
03036 Chromosome and associated proteins [BR:
cpun03036
]
140491322 (rfc2)
03400 DNA repair and recombination proteins [BR:
cpun03400
]
140491322 (rfc2)
DNA replication proteins [BR:
cpun03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
140491322 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
140491322 (rfc2)
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
140491322 (rfc2)
DNA repair and recombination proteins [BR:
cpun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
140491322 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
140491322 (rfc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
RCF1-5-like_lid
AAA_22
nSTAND_NTPase5
AAA_14
AAA_16
Mg_chelatase
Viral_helicase1
AAA_11
Rad17
AAA_assoc_2
RuvB_N
DNAX_ATPase_lid
nSTAND3
AAA_19
MipZ
AAA_24
AAA_18
ABC_tran
AAA_5
AAA_28
AAA_25
AMP-binding_C_3
NTPase_1
SLFN-g3_helicase
AAA_23
RNA_helicase
MeaB
AAA_30
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
140491322
NCBI-ProteinID:
XP_072445436
LinkDB
All DBs
Position
19:complement(47818880..47856404)
Genome browser
AA seq
367 aa
AA seq
DB search
METGPEAERGLGLGHDTAEGEIREQEGHKEASASASSAAGRTALAAYELPWVEKYRPLKL
NEVVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNA
SNDRGIDVVRNKIKMFAQQKVTLPKSRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRF
ALACNASDKIIEPIQSRCAVLRYTKLTDAQILARLMQVVEKENVQYTDDGLEAIIFTAQG
DMRQALNNLQSTHSGFGFVNSENVFKVCDEPHPLLVKEMIQHCVSANIDEAYKVVAHLWK
LGYSPEDIIGNIFRVCKTFQMQEYLKLEFIKEIGYTHMRIAEGVNSLLQMAGLLARLCQK
TAAPPAS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggagacggggccggaggctgagcgcggcctgggcctggggcacgacacggcggagggt
gagatccgggagcaggagggacacaaagaggcttcggcatccgcttccagtgctgccggg
cgaacggcgctggctgcgtatgaactgccctgggttgagaaatacagaccactgaaactc
aatgaagttgtgggcaatgaggaaaccgtcagcaggttggaggtgttcgcaagggaggga
aatgtacccaacatcataattgcaggtccacctggcactggaaaaaccacaagcatcctg
tgcttagcacgtgcattgttgggacctgcactgaaagatgctgttcttgagctcaatgcc
tcaaatgaccggggtattgatgtggtcagaaacaaaatcaaaatgtttgcccagcagaag
gtcacactgccaaaaagtcgtcacaaaatcattatcctggatgaagctgacagtatgaca
gatggagctcaacaagccctaaggaggacaatggagatttactctaaaacaactcgcttt
gcactggcatgcaacgcttcagacaaaatcatagaacctatccagtctcgctgtgctgtc
ctgcgttacacaaaactcactgatgctcagattctggctcgactgatgcaggtggttgag
aaggagaatgtccagtacacagatgatggactggaagccataattttcacagcacaagga
gacatgagacaggctttgaacaacttgcagtcgacacattctggttttgggtttgttaac
agtgaaaatgttttcaaggtctgtgatgaacctcatccacttctggtaaaagagatgatt
caacactgtgtcagtgcaaacatcgatgaggcatacaaggttgttgctcatctctggaaa
ctgggttactcaccagaagacattattggcaacatcttccgtgtctgtaaaaccttccaa
atgcaagagtacttgaagctggagttcataaaggagattggatacactcatatgcgaatt
gctgaaggggtgaattccttattacaaatggctgggctccttgctcgactttgccaaaag
actgcagctccaccagcaagttga
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