Chiloscyllium punctatum (brownbanded bambooshark): 140491441
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Entry
140491441 CDS
T11285
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
140491441 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpun04131
]
140491441 (rabgef1)
Membrane trafficking [BR:
cpun04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
140491441 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
140491441 (rabgef1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
140491441
NCBI-ProteinID:
XP_072445716
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All DBs
Position
19:complement(68657767..68702882)
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AA seq
531 aa
AA seq
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MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYSKARQRQIQEDWELAER
LQREEEAAYASSQGAPSLTFSKFEEKKTNETKRKVQTVKKFFSPSSRAAPKKVNQAKVHK
HGLGGRECNADNILRDLKEIFTPPWELASPTEADSQEVKASSPSINRQTSLETERASKDF
IDFLKSFRKPGQDILKQCRGFIESMQHKKELSIEEQSECVQDFYQNMVDRLQTHSTFKGS
SERIDKLMDQIENFIMTRLYKNVFCPETTDDEKKDLAIQKRIRALHWVTLEMLCVPVNEE
IPEVYELVVKAITAVIEMDSRRVPREKLTCITQCSKQIFNAIKITKNEPASADDFLPTLI
YIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLTQED
FDRYMSGQASPKKQDSEEWSPEACPGLKQMYKNLNLISQLNERQQKILSDAKQLEKDLID
WSEGVTKDIEDIIEKYPLEIKPRGQPVAAIDSDNVENDKLPPPIQPQVFIG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgaaatcggaacgaagaggaattcatgtggaccagtcagaactgctgtgtaag
aaagggtgtggttactatggaaatcctgcttggcaaggtttttgttccaagtgttggaga
gaagaatacagcaaagcgagacaacgacaaattcaggaagattgggagcttgcagaacgt
ttacagcgtgaagaggaagctgcttatgctagcagtcaaggggctccatcactcaccttt
tctaaatttgaagagaaaaaaacaaatgagacaaaaagaaaagttcaaactgtcaaaaag
ttcttcagtccatcatcccgggctgcaccaaagaaagtgaatcaagccaaagttcataag
catggattaggtgggagggaatgcaatgcggataacattcttagggatttgaaggagatt
tttactccaccgtgggagctggcttctcctactgaagcagacagtcaggaagttaaagcc
tcaagtccatccataaataggcaaaccagcctagaaacagaacgagcatctaaggatttt
attgatttccttaagagctttcgcaagcctggtcaagatatactaaaacaatgcagagga
tttattgagtcaatgcaacataaaaaggaattgagcattgaggaacaatctgagtgtgtt
caggacttctatcaaaatatggttgaccgactgcagacacactccacttttaaaggttcc
tctgagcggatagacaaattgatggaccagattgaaaacttcatcatgacgcgactgtac
aaaaatgtgttttgtccagagacaactgatgatgagaaaaaagatcttgcaattcagaaa
agaatcagggcattgcactgggtgactcttgaaatgttatgtgttccagtgaatgaagaa
attcctgaagtttatgaattggttgtgaaagcaattacagctgttattgaaatggattca
cgacgtgttccccgtgaaaaattgacctgcatcacacaatgcagcaagcaaatattcaat
gctataaagatcacaaagaatgagcctgcttcagctgatgacttcttacccacacttatc
tacattgttttgaaagctaatccacctcgcttacagtcaaacatccagtacattactcga
ttctgcaatccaagcagactaatgactggagaagatggatattatttcacaaatttatgt
tgtgctgttgccttcattgaaaaattggatgcccaatctttgaacctgactcaggaagat
tttgatcgctatatgtctggccaagcatcacctaagaagcaggactctgaagaatggtct
cctgaagcatgtccaggactgaagcagatgtacaaaaatttaaatcttatttctcaactg
aatgagagacaacaaaaaattttgtcagatgctaagcagcttgaaaaagatctaattgac
tggagcgaaggtgtgacaaaagacattgaagatattattgagaaatatccacttgaaatc
aaacctaggggccaaccagtggctgcaattgattctgacaatgtagaaaatgacaagctt
ccaccaccaatccagccacaagtattcattggttga
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