Chiloscyllium punctatum (brownbanded bambooshark): 140491510
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Entry
140491510 CDS
T11285
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpun03009
]
140491510 (ddx52)
Enzymes [BR:
cpun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140491510 (ddx52)
Ribosome biogenesis [BR:
cpun03009
]
Eukaryotic type
90S particles
Helicases
140491510 (ddx52)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SNF2-rel_dom
PBP1_TM
Rrp15p
Motif
Other DBs
NCBI-GeneID:
140491510
NCBI-ProteinID:
XP_072445893
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All DBs
Position
19:complement(79895468..79932817)
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AA seq
653 aa
AA seq
DB search
MMVSIADELLCGLMYRCSMLGACLSMVMETLDLFRALGSGARFDWKRFGKDAERLRVMNS
SSTILSENVPDLDFFNSQPAKNCKSVVSVLKSNGEEKESTADCKDDMCVSLGKRKLDVGS
SVKKKRNKVTNAMSDIFSNTKDDDDDDDGIMLMSSLGRKTKSSIDRTDTECSAEKLEHQR
REKINRLRRKHRIHVDGTDIPEPVATFEQLLQEYNVHPKIIQNIQEAGFQSPTPIQMQAI
PVMLHNREILACAPTGSGKTLAFCIPLLTCLKQPMNKGFRALILSPTRELASQTHRELVK
LSEGIGFRIHMINKAAEAAKKFGPKTSNKFDILVTTPNRLIYLLNQDPPALDLSRVEWLV
VDESDKLFEDGKSGFRDQLATIFLACTSHSVRRAMFSATFAFDVEQWCKLNLDNVISVSI
GTRNTAVETVEQELLFVGTETGKLVAMRDLVKKGFSPPVLVFVQSIERAKELFYELIYEG
INVEVIHAERTQQQRDNVVCSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTTAVEY
IHRIGRTGRAGHRGKSVTFFTEDDKPLLRSIANVIKQAGCPVPDYMMQINKLQSKQKKRL
IRHPIKRADIKTTPKYFIEKAARTKKMIQKSKKKEKSRASVPAAKAEQVTTES
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgtcgatcgccgatgagttgctctgtgggttgatgtatcggtgctccatgttg
ggggcctgtctgtccatggtgatggagactctcgatctgttccgggcgctgggctcgggg
gcccgctttgattggaaacgcttcgggaaggacgccgagaggctgcgggtaatgaattca
agcagcaccatcttaagtgaaaatgttcctgaccttgacttttttaacagtcagcctgct
aaaaactgcaaatcagtggtcagtgtgttgaaaagcaatggggaggaaaaagagtctaca
gcagactgcaaggacgacatgtgtgtatccctaggaaaaagaaaattggacgtgggtagt
tcagtaaagaagaaaaggaacaaagtgaccaatgcaatgtctgacattttttccaatacc
aaagatgatgatgatgatgatgatggaataatgttgatgtcctcactgggaaggaagacc
aagagtagtattgacaggacagacacagaatgcagtgctgagaaactggaacatcaacga
cgagaaaagataaatcgactccggcgtaagcatcggattcatgtggatggaacagatatt
cctgaaccagttgcaacctttgaacagctcttacaggagtataacgtgcacccaaagatt
attcagaacatacaggaagctggtttccaatcacccacccccatacagatgcaagccatt
cctgtaatgctacataatcgtgaaatcctggcttgtgccccaactggatcgggaaagacc
ttggccttttgcattccacttttgacttgtctaaaacaaccaatgaacaagggtttcagg
gccctgatactgtctcctactcgtgagcttgccagccagactcatcgggagctagtaaag
ctctctgaaggtattggattcagaattcacatgatcaacaaagcagctgaggctgccaaa
aagtttggtcccaagacgtcaaataaatttgatattttggtgactactccaaacagactg
atttatttgttaaatcaggatcctcccgctctggacctcagcagggtggagtggctggtt
gttgatgaatctgataagttgtttgaagatggcaaatctggattcagagatcagctcgcc
actatcttcttggcatgtacatctcacagtgtccggcgagccatgtttagtgccacattt
gcatttgatgttgagcagtggtgcaaactgaacttggacaacgtgatatctgtgtcgatt
ggtacaaggaataccgccgtggagacagtggaacaagagttactttttgtgggtactgaa
actggaaaactagtagcgatgagagatctggttaaaaaggggttttcacctccagtgcta
gttttcgttcagtctattgaaagagcaaaggaactcttttatgagttgatctacgagggc
attaacgttgaggttatccatgcagaaagaacacaacagcagagagataatgtagtatgc
agcttcagagccggaaaaatttgggtcctcatttgtacagctctcctggctcgtggtatt
gattttaaaggagtgaatctagtcatcaattacgactttccaactactgctgtggagtac
attcatagaattggacggactggaagagctggtcatcgaggaaagtctgttacatttttc
acagaagatgataagccacttttacggagtatagcaaacgttatcaaacaagctggctgc
cctgtaccagactatatgatgcaaataaacaaactgcaaagtaaacaaaagaaaaggttg
atcagacatccaatcaaacgagcagatatcaagaccacaccaaagtacttcattgaaaag
gctgccaggacgaaaaaaatgatacagaagagcaagaaaaaagaaaaatcccgtgcaagt
gtgccagctgccaaggctgaacaggttaccactgaaagctaa
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