Chiloscyllium punctatum (brownbanded bambooshark): 140491601
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Entry
140491601 CDS
T11285
Symbol
med13a
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13a isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cpun
Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpun03021
]
140491601 (med13a)
Transcription machinery [BR:
cpun03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
140491601 (med13a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
SMN_YG-box
Motif
Other DBs
NCBI-GeneID:
140491601
NCBI-ProteinID:
XP_072446130
LinkDB
All DBs
Position
19:89599938..89820344
Genome browser
AA seq
2159 aa
AA seq
DB search
MMSSSGCWVANGASLEDCYSNLFSLADLPGIKWRRYSWKGPVGTPLVIPVAEDDAILCSF
SRCLKANVLCVWRRDVIPGHRELWIFWWGEVPNFADLIHHELKVEEEGLWEQGLSYECRT
LLFKAIHNLLERCLLNRNFVRIGKWFVKPYEKDEKPVNKSEHLSCSFTFFLHGDSKVCTS
VEINQHQPVYHLSEQHVTVAQGSSNPFQVILSPFGLSGTLTGQSFKLSDPPTLKLIEEWK
QFYPIQTSSKETADDKQEEVDWDDDSIAAVEVIVAGVRMVYPACFVLVPQPDVATGILSS
STGTTHCTTAYTSVHQVPPPIRDPAISSVTLTPPTSPEEAETAEIQATQKWAKLPSMCEV
LNMENSGHGGKIPRKLANQVVEKVWQECNLNKTQKKRKYSSVNGCEDDSSGKEASWDFIE
ATHRVNCNCSRHKNKRGTGVQGLSQTPGPQQPTALKHKINDKQEKGEKQQKRPLTPFHHR
NSVCEDVAMEPDSSNHRLGIRQQDNRRRYSNTRPNDLVSSTKSSQLHISELPNSPPPPPL
SPHPCERDEDVGDAFKNALTPQSQPFCQMPAPDPLLPGKAVEDRMETLPTQAFTLGFSEV
MESTSYSSSVLQFEDDGPDVTWKYYRLPTCMESDFVPPQLPLDKYREEYAAVSNQEHALS
SVSDLVVHSHKPLKISEERVQGYIQSRNQYYKSIRTEADSKSEIDPYAFDDGDEEFSLPD
KKDKQGNERDPGKKHSQKGDNDSIGVSHSVLPAEGEDAMSIFNSGTKLDGQRSPTHSRTA
STSLMNEVDLVVSYKDLDNLFDDDDELGQPGSRSALVGSDEKICNRDSKAGPFDTFPCIS
SADLQQMFPTPPSLEQHGPGYSPMNINCKEFGSMDNTPGMTLDGHHFTATSLNHFKIEVE
EGMGSPKPSEVKDFSYVYNPEKCQGYVGCTMFAPLKILPSQCQPPVKLPEEYRPSWTVGK
LDLLPPVPPMPYIRDINIPSVGSGMDQDYIQTCTPQTHTPFGVTNSAPPSNGAGVLPSPA
TPRISAPTPRTPRTPRTPRGCGGPASVQGSVKYENSDLYSPASTPSTCRPLNSVEPATVQ
SIPEAHSLYVNLILSDSIMNLFKDCNFDSCCVCVCNMNIKGADVGLYIPDPTKESQNPCT
CGFSAVMNRRFGNNSGLFLEDELDIIGRNTDCSSEAEKRLEDLRNISVEQGEGGTKEPEK
MPDELILLLQDQCTNPFSSLRSVDPSVVAKLQTVGPPVRVEDRDYYRECYTALEQGYQFM
DNMSGGKLDETLVKNSCLHLWSRRNAVDVSMLCSQDLLRLLLSLQPVLQDAIQKKRAVRS
WESIQHVQGPLTWQQFHKLAGRGSYGTDESPEPLPIPTFMLGYECDFVVLSPFALPYWEK
LLLEPYGSQRDIGYVVVCPENEALLNAARSFFRDLSAVYESCRLGQHRPISKLLPDGIMK
VGTKAALNIAEQPVNDWFSQHCVNASNEAFSKLKLYAQVCRHDLGPYLAGQTLDNSLFSQ
PNPISSCNRSSTLQTPVQVPAGGSSASSTSAPVPSGTLANTAITGTVASSTTSNVASIPV
NLTSVSAAVKPSSSFPPFAHLNNSSSAVTAQSSASQQSNGISGDSTVGGMGQQHQEPPES
TMERDKIGVPTEGESHAIIYPPSIVVYIVDPFTYNVEDERSSSSNVWTLGLLRCYLEMIH
FLPKHIKNAISVQIVPCQYLLQPVKNDDRHLYSQHLKSLAFSVFTQCRRSLPSSTYVKAL
TGFGPGLALDSTLKSPDRPEHLRIYSPPFILAPVKDKQTELGETFGEASQKYNVLFVGYC
LSHDQRWLLGTCTDLYGELLETCVINIDVPNRARRRKGSPRRMGLQKLWDWCLGIMQMTS
LPWRVVIGRLGRIGHGELKDWSCLLGRRTLQSLSRHLKDTCRMCGISAADSPSILSACLV
AMEPQGSFVIMPDSVSVGSVFGRGTSLNMQTSQLSTPQDTSCTHILVFPTSAMVQVPTGS
YEINVEEMGIFELLDPDDDLIINLPASPSTSPVHSPGSHYPHGGDTGKGQCTDRQESHDE
VTILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVPSVHSDELLHS
KHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPVHFVVLTQLYNFITSML
NT seq
6480 nt
NT seq
+upstream
nt +downstream
nt
atgatgagttcgtccggctgctgggtggcgaacggggcgagtttggaggattgttattcc
aatctcttctctctggctgacctgcctggaattaaatggcgacgttattcatggaagggt
ccagtggggacaccgctcgttatcccggtggctgaagatgatgccattctgtgcagcttc
agccgctgcttgaaagctaatgtactttgtgtgtggcgcagggatgtgataccaggccac
cgggagctttggattttctggtggggtgaagtgccaaattttgctgatcttatccaccat
gagctcaaagtggaagaagagggattatgggagcaaggactgtcctatgagtgccgtaca
ctgctttttaaggctattcacaacttattggaaaggtgcttgttgaacaggaactttgtg
cgaattggaaagtggtttgtgaaaccatatgaaaaagacgagaaaccggtgaacaaaagt
gagcacttgtcctgttcctttacttttttcttgcatggggatagtaaagtctgtaccagt
gttgagataaaccagcatcaaccagtataccatctcagtgaacaacatgtcactgtggcc
cagggatcctccaaccccttccaagtgatcctcagcccctttggattaagtggtaccctg
acaggtcagtctttcaagctatctgatcctcccacccttaaactgatagaagaatggaag
caattttatccaatacagaccagctcaaaggaaactgcagacgacaaacaggaagaggta
gactgggatgatgactcaatagcagctgtagaagtcattgttgctggtgtgcgaatggtg
tacccagcgtgctttgttctggtgcctcagcctgatgttgccactggcatcttgagcagc
tccactgggacgacacattgtacaactgcatacacaagtgtccaccaagtgcctccccca
ataagggatccagccatttcctctgtgaccttgactccacccacatcaccagaagaagct
gaaacagctgaaatacaggccacccagaagtgggcgaagcttccttcaatgtgtgaggta
cttaatatggaaaattcagggcatggtggaaagattccaagaaagttagccaatcaagtg
gtagaaaaggtgtggcaggagtgcaatctcaacaaaacccagaagaaacggaagtactct
agtgtgaatggctgtgaagatgattcatctggcaaagaggcatcttgggattttattgaa
gctacgcatagggtgaattgcaactgttcaaggcataagaataaaagaggcactggtgtc
caaggactgtctcagactcctggtccacagcagccaacagcactcaagcacaaaattaat
gacaagcaagaaaaaggggaaaagcaacagaagcgaccactaactccttttcatcaccgt
aattcagtatgtgaagatgttgcaatggaaccagattcaagtaatcacagacttggaatt
aggcaacaggacaacagaagacggtattcaaatacaaggcctaatgacctggttagctcc
acaaagtcctcacagttacacatctcagagctaccaaactcaccgccaccaccacccctc
agccctcatccatgtgagagagatgaggatgtgggcgatgcatttaaaaatgcattgaca
cctcaaagtcagccattctgccagatgcctgcaccagatccactacttccaggcaaagct
gttgaggacaggatggagacacttcccacccaggctttcaccttggggttttcagaagtg
atggagtctacaagctacagtagcagtgtgttgcaatttgaagatgatgggcctgatgtt
acatggaaatattatcgactacccacttgcatggaatctgattttgtgccaccacagctg
ccgttggataaatacagagaagagtatgctgcagtgagcaaccaagaacatgcactttct
tctgtctcagatttggtggtacactcacataagccattgaagatctctgaagagcgggta
cagggatacatccagagtagaaaccagtactacaagagcattcgcacagaggcagactcc
aagtctgaaattgatccatatgcatttgatgatggcgatgaagaattcagcctgcccgat
aagaaggacaagcaaggcaacgagagagatcctggaaagaaacattcacaaaagggggac
aatgacagtattggtgtatcccattcagtgttgccagcggaaggagaggatgccatgtca
atatttaattctggaacaaaactagatggacaaagatcgcccacacacagtcggactgca
tccacaagcctcatgaatgaggttgatctggttgtctcgtataaagatcttgacaatctg
tttgatgatgatgatgaacttgggcagcctggttctcgaagtgcactcgttggatcagat
gagaaaatctgcaacagggattcgaaggctggaccttttgacacattcccttgtataagt
tctgcagacctgcagcagatgtttcccacacctccatccttggagcagcatggcccaggc
tactctccaatgaatattaattgcaaagagtttggaagcatggataacaccccaggaatg
actctggatggccaccattttactgcaacaagcctgaatcatttcaagattgaagtggaa
gagggaatgggtagtccgaaaccttcagaggttaaggacttttcttatgtttataatcct
gagaagtgccaaggttatgtggggtgtactatgtttgcaccattgaaaatcttaccaagc
cagtgtcagccccctgtaaaactcccagaggaatatcgcccttcgtggactgtgggcaag
ttggacctgcttcctcctgtacctcccatgccatatatccgtgacataaatattccaagt
gttggaagtggtatggatcaggattacatacagacctgcacaccacaaacgcatacccca
tttggagtgacgaacagtgctcctccaagtaatggtgctggtgttcttccatcacctgcc
actccacgcatctctgcaccaactccaaggacaccaaggaccccacgcacccctcgtgga
tgtgggggtccagcaagtgttcagggctctgtgaagtatgagaactctgatttatattca
cctgcttctacgccttcaacttgtcgtccactgaattcagtagaacctgcaacggtacaa
tccatccctgaagcgcacagtctttatgtgaacctaatcctatctgattccatcatgaat
ctctttaaagattgcaattttgacagctgctgcgtctgtgtctgtaacatgaacatcaaa
ggagctgatgttggattgtacatcccagaccctaccaaagagtcacaaaacccatgcaca
tgtggattcagtgctgtcatgaaccgaaggtttggaaacaactctgggctctttttggaa
gatgagttagatattattgggcgaaacacagactgtagcagtgaggctgaaaagcgacta
gaggatctccggaatatttctgttgaacagggggaaggaggcaccaaggagcccgaaaaa
atgcctgatgagttaatattgctacttcaggaccagtgcactaaccccttctcctcattg
agatcagtggatccttcagtagtggcaaaattacaaacagtgggaccaccagtgcgtgtg
gaggatagagactattacagggaatgttacactgctttggagcagggatatcagtttatg
gacaatatgtcaggtgggaagcttgatgaaacacttgtgaagaactcttgtttacatctc
tggtcaagaagaaatgctgtggatgtcagcatgctatgttcgcaagatcttctacgcctt
cttctctcccttcagcctgttttgcaagatgccatccagaaaaaacgagctgttaggtca
tgggagagtatccagcatgtgcaggggcctctcacttggcaacagttccacaaattggct
ggtcggggatcttatggtacagatgagtctccagagccactaccaatcccaacatttatg
ttgggttatgaatgtgattttgtggtgttatctccatttgcattgccatactgggagaag
cttcttctggagccatatggatcgcagagagatatcggctatgttgtggtgtgtccagaa
aatgaagcacttttaaatgcagcaagaagtttctttcgtgatctcagtgcggtctatgag
tcctgcagacttgggcagcacaggcccatctcaaaattgcttcctgatgggatcatgaaa
gttgggaccaaagcagccttgaatattgcagagcagcctgtaaatgactggttctctcag
cactgtgtgaatgctagcaatgaagcattttccaaactgaaactttatgctcaagtgtgc
agacacgatctgggtccatatcttgctggtcaaacattggacaattcattattctcgcag
cctaaccccatttcttcttgcaatcgatccagtacattacaaactcctgtacaagttcct
gctggaggttcatctgcatcttccaccagtgctcctgtaccatctggtactttagcaaac
actgccataactggcactgtagctagtagtactacttcgaatgtggcttcaatacctgtg
aacctgaccagcgtatctgctgcagtaaaaccgtcttcctcttttcctccatttgcacat
ttgaataattcctccagtgctgtgactgcacaaagttcggcctctcagcagagtaatggt
atctctggtgattcaacagttggtggaatgggacaacaacaccaggaacctccagagagc
accatggaaagggataaaattggggtcccaacggagggggagtctcatgccatcatttac
ccaccatccatcgttgtgtacattgtggatccttttacttacaatgtagaggacgaaaga
tcgtcatcttcaaatgtttggacacttgggctattacgctgctacctagagatgattcat
ttcttaccaaaacacatcaagaatgcaatatctgtgcaaattgtcccttgtcagtatctg
ttacagcctgtgaaaaatgatgatcggcacctgtactcccagcaccttaaatctttggcg
ttttctgtgttcactcaatgccggagatcattaccatcctccacctatgtcaaagcactg
actggctttggcccaggcttggccttagacagcaccttaaagagtccagatagaccagag
catttgcggatttatagcccgccgtttatcttggctccagtgaaggataagcagactgag
ctaggagaaacatttggcgaggcgagccagaaatataatgttctttttgttggctattgc
ttgtcacatgatcagaggtggttgcttggaacatgcacggatctctatggagagttgctg
gagacctgtgtcattaatatagatgtaccaaacagggctcgcaggcggaaaggttcaccc
cggagaatgggattgcaaaaactctgggattggtgtttgggcatcatgcagatgacatca
ctaccctggagggttgttattgggcggcttgggaggataggacatggagaattaaaagac
tggagttgtttgcttggtcgtcgcactttgcagtccctcagccggcacctgaaggatact
tgcagaatgtgtggtatttctgcagctgattctccaagcatccttagtgcttgtttggtt
gctatggaaccacagggatcgtttgtgataatgcctgattctgtctctgttgggtcagtg
tttggtcgtggcacatcactcaacatgcagacgtcgcaactgagcacgccacaggataca
tcatgcactcacatcctagtgtttcctacctccgcaatggtgcaagtgccaactgggagc
tatgaaataaacgttgaggaaatgggaatctttgaattattggacccagatgatgatctc
ataattaacttgccagcatctccatccacatccccggtacattcaccagggtcccattat
ccacacggtggtgacacgggcaagggtcagtgcacagaccgacaggaatctcatgatgaa
gtcaccattttgcagcagcccctggcactgggatactttgtctcgacagctaaggctggg
ccacttcctgattggttttggtcagcctgccctcaagcacagaaccaatgtccacttttt
ctcaaggcctcgttgcacctccacgtgccttcagtgcattcagatgagttgcttcatagt
aagcactcccacccacttgattcaaaccaaacctctgatgtgctcaggtttgttctagaa
caatacaatgctctttcttggctgacctgtgaccctgccacccaggaccgccgctcctgc
ctccctgttcattttgtggtgctgacgcaactgtacaacttcatcacaagcatgttgtaa
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