Chiloscyllium punctatum (brownbanded bambooshark): 140491634
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Entry
140491634 CDS
T11285
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
140491634 (scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpun04131
]
140491634 (scarf1)
Membrane trafficking [BR:
cpun04131
]
Endocytosis
Phagocytosis
Scavenger receptors
140491634 (scarf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_Teneurin
EGF_2
EGF_STAB1-2
SPAR
Herpes_glycop
Motif
Other DBs
NCBI-GeneID:
140491634
NCBI-ProteinID:
XP_072446192
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Position
19:93146127..93388565
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AA seq
865 aa
AA seq
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MAMGPLLILVSLYTLIWTSHGQQLHPNGTNVCSSARDPPSLSCCPGWRQQGNECSIAICD
GPHSCSPEEICVRPGVCRCPHGFFGAKCVTKCPDQFWGPDCRNVCACHRNGRCEARTGRC
LCYRGYWGPRCSRKCDCLHGQCDSSTGSCQCEAGWWGHDCSKLCRCETGKSVCDPQTGRC
LCSPGYWGTRCNLLCYCHRSACGQLTGVCECTAGWWGPLCQRRCACLHGFCNSTNGHCVC
QPGYHGTTCNQPCLTGRYGESCSKRCGHCKDAEQCSPSDGSCPACLRGWTGSQCERPCPP
GAHGDNCTEQCPHCRHGEPCNTITGHCRSCNPGWIGPRCDTRCVSRTFGLGCRSICPDCN
HGNCHHITGECVCHEGYTGARCNLTCLSGFYGLNCSTPCHCLGAACDSVTGDCPFSQSGV
VIAVVVVSLFILLCILCCCCCGNDKNDPKNRTLEEEHGPITRMKHHVRGVLLNLGSGISC
FSFGNQKLPKVTVSHHDADVSFNCSFIDSPSAGWESVSFSSFGTDEGEPVYCVPPQEGSM
LLTPEAGFQELSSRCNYFPVEQSEPNSEDTVQPLSIPRTSSIVKAHRPSVSFAEGTKFGP
ELRRGSMPESRVIPAANVQRKRKLSWTLSKLSPIESVPGQSECQPYQCIDVPGVYPEDRA
SSHHSLTSPGARAGEHPAPSPMAPRDPQGPEPRGSPVTPAGARIGSSSRKVPRREAQRSS
RIWASTADGIGVGTVQAMLRRFGSFQKQRSAPQQELGPRARGQKVSKLQRTLEKKLRSCP
SAGEAPSPSEHYPPGSHQIPAGGTSSLPRKALIPTTPILHKLVANVTEGTQGRLDMLHPS
GQSEPSPELEPEIPGRDQEPRQNSL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggctatgggacccctactcatcctggttagtctatacactctgatctggacctctcac
ggtcagcaacttcatccgaatggaactaatgtttgttcatcagcaagagatcctccgtca
ctgagctgttgtccaggctggaggcagcagggcaatgagtgctccatcgcaatctgtgac
gggccacattcctgcagcccagaagagatctgtgtccggcctggagtctgccgctgtccc
cacggattcttcggagccaagtgcgtgaccaagtgtccggatcagttttggggtccggac
tgtcggaatgtgtgtgcgtgccaccggaacgggaggtgtgaagccaggacggggaggtgc
ctgtgttaccgtggttactggggcccacggtgcagccggaagtgtgactgtctccatggc
cagtgtgatagcagtaccgggagctgccagtgtgaggcaggctggtgggggcatgactgc
agcaaactgtgtcgctgtgagacagggaagtcagtgtgtgacccacagacagggaggtgc
ctctgctcccctgggtactggggcacacggtgtaacctgctgtgttactgtcaccgctcg
gcatgtggccagctaaccggggtgtgtgagtgtaccgcgggctggtgggggcctctgtgt
caacgacgctgtgcttgtctacatggattctgtaactccaccaacgggcactgtgtgtgc
cagcccggctaccacggcacaacctgcaaccagccctgtctcaccggccgctatggagag
agctgcagcaagaggtgcggtcactgtaaggatgcagagcagtgctcccccagcgatggt
tcctgcccggcctgtttgcggggatggactgggagtcagtgtgagcggccgtgcccccca
ggagcacacggggacaactgcaccgagcagtgtccccactgcaggcatggggaaccctgc
aacaccatcactggtcactgccgaagctgcaaccctggctggattggccccaggtgtgac
acccgctgtgtgtctcggacgtttggtcttggttgtcgatccatctgtcctgactgtaac
catggaaactgtcaccatatcacaggggagtgtgtgtgccatgagggatatacaggagcc
agatgtaacctcacgtgtctgagtggattttatggtctgaactgttcgactccctgtcac
tgtcttggtgcggcctgtgactctgtgactggagactgtcctttcagtcagagtggtgtt
gtgatcgctgttgttgtggtgtcgctgttcatcctgctctgcatcttgtgctgctgctgc
tgtggaaacgacaagaacgaccccaagaacaggacactggaggaggaacatggtccgatt
acacggatgaagcaccacgtccggggagttctgctcaatcttggctctggaatatcgtgc
ttctcgttcggaaatcagaaactgccgaaagtgaccgtttcccaccatgacgctgatgtc
agtttcaactgcagtttcattgactctccctcagctggatgggaatctgtctcattctcc
tcctttggcactgatgagggggaacctgtctactgtgtccctcctcaggaaggaagcatg
ttgctgactcctgaagctggttttcaggaattgagctcccgctgcaactatttcccggtg
gagcagtcggagcccaacagtgaggacaccgtgcagccactgagcattcctcggacctcc
agcattgtcaaagctcaccggccctcagtctcgttcgctgagggcaccaaattcgggcct
gagctgaggaggggctcgatgcctgagagcagggtcatccctgcggccaatgtccagcgg
aagaggaagctgtcctggactctcagtaagttatcgcccattgagtcggtaccagggcag
tctgaatgccagccttaccagtgtatcgatgtgcccggtgtctaccctgaggatagagct
tcatcccaccacagtctgacctctcccggggcacgtgctggggagcacccagctccctcc
cccatggcccccagagacccccagggtccggagccgaggggctccccggtcacaccggca
ggggccaggattgggagcagtagccggaaggtgccgagacgggaagctcagcgctcctcc
aggatctgggccagcaccgcggatggaatcggagtcggcacagtccaggcaatgctgagg
cggttcggaagtttccagaagcaacgatcagctccccagcaggagctgggtcctcgcgcc
cggggacagaaggtctccaaactgcagcgcacgctggagaagaagctgaggtcgtgtcca
tccgcgggtgaggccccatctcccagtgagcactatcccccaggctcccatcaaatccca
gcaggtggtaccagctccctgcccaggaaggccctgatcccaaccacacccatcctccac
aaactggtggccaacgtcacagagggcacacaggggcggctggacatgctgcacccctcc
ggccaatccgaaccctctccggagctggagcccgagatcccgggcagggatcaggaaccc
cggcagaattctctgtga
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