KEGG   Chiloscyllium punctatum (brownbanded bambooshark): 140491879
Entry
140491879         CDS       T11285                                 
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
cpun  Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140491879 (rbm22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpun03041]
    140491879 (rbm22)
Spliceosome [BR:cpun03041]
 Complex B
  Other components
   Prp19-related factors
    140491879 (rbm22)
 Complex C
    140491879 (rbm22)
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 Torus zf_CCCH_4 RRM_YTH1 zf-CCCH_2 Nup35_RRM_2 zf-CCCH RRM_occluded zf-CCCH_4 RRM_3 zf-CCCH_3 zf-CCCH_10 zf-CCCH_12 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 140491879
NCBI-ProteinID: XP_072446410
LinkDB
Position
20:10806960..10835402
AA seq 423 aa
MATSLGANTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICSRPFTVFRWCPG
ARMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGISLKDEMPKSDVNKEYYTQN
MEREIQNSDGTRPVGALGKATSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRAATMPRLDPPEDKSITTLYVGGLG
EQISETELRNHFYQFGEIRSITVVQRQQCAFIQFATRQSSELAAEKSFNKLIINGRRLNV
KWGRSQAARGKEKEKDSNVSESGMKLEPVPGLPGALPPPPPNIEEETPTNFFNLPPSAPP
AVVNLSLPPPPGLAPPPPPGFGATLFHGMPPPPPPFLRAPGPIHYPSQDPQRMGAHTNKP
SNA
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggcgacctcgctgggagcgaacacgtacaaccggcagaactgggaggacgcggatttt
ccgattctgtgccaaacatgcctcggagaaaacccctacattcgaatgacaaaggaaaaa
tatgggaaagagtgcaagatctgttcccggcctttcactgtcttccgctggtgtcccgga
gctcggatgcgttttaagaaaactgaggtgtgccagacgtgcagcaagctgaagaacgtg
tgccagacctgcctgctggacttggaatacggtttgcccatccaggtccgtgatgcagga
atatcactcaaggatgagatgccaaagtctgacgtcaataaggagtactacacacagaac
atggagcgagagatccagaactcagatgggacgagacctgtgggtgctctgggcaaggcc
accagctccagcgacatgctgctgaaattagccaggaccacaccgtactacaaacgcaac
cgaccgcacatctgctccttctgggtcaagggagaatgcaagcgaggagaggagtgcccc
tacaggcatgaaaagccgactgacccggatgatcctttggctgatcagaacatcaaggat
cgttactatggtattaacgacccagtggctgacaagttgctgaaacgggcagcgaccatg
cccaggttggacccgccagaggacaagtccatcacgactctgtatgtgggaggtctcggg
gagcagatctcagagacagagctacggaatcatttttaccagtttggagagattcgttcc
attactgtggtccagcggcagcagtgtgcgttcatccagtttgccaccaggcagtcctca
gagctggcagctgagaaatcattcaacaagctcatcatcaacgggcgaaggctgaatgtt
aaatggggccgatcacaagctgccagagggaaagagaaagagaaggactccaatgtctcc
gagtcaggaatgaagttggagcctgttccagggctgcccggtgccttgcctccgccccca
ccaaacattgaagaggagactcccaccaatttcttcaaccttccgcccagcgctccgcct
gccgtggtgaacctatccctgcctcctccacctggcctcgcaccacctccaccaccaggg
tttggagccaccttgttccatggcatgccccccccaccacctcccttcctgcgggctcca
ggccctatccattacccatcgcaggaccctcagcgaatgggtgcccacacaaacaaacca
agtaacgcctaa

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