Chiloscyllium punctatum (brownbanded bambooshark): 140492004
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Entry
140492004 CDS
T11285
Name
(RefSeq) interferon regulatory factor 1-like isoform X1
KO
K09444
interferon regulatory factor 1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
140492004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpun03000
]
140492004
Transcription factors [BR:
cpun03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
140492004
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
140492004
NCBI-ProteinID:
XP_072446686
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Position
20:complement(31224861..31250049)
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AA seq
333 aa
AA seq
DB search
MPLTRMRMRPWLELQINSNAIPGLIWINKERKMFQIPWKHAARHGWNMDTDASLFRNWAI
HTGRFRQGIDSPEPKTWKANFRCAMNSLPDIEEVKDKSVNKGSSAIRVYRMLPPVDRSKQ
KEKKSRSSKDSKSKSKKKEFKSKVKLEVTEPVTPKLPVDHTTYTAPEQSTSQEMVVDSTV
NIGDFSPSETCPVVDWPINEIVGESEDQVVSTCDLYPFQISPMPSPTATSAADSFLTSDE
ASEITQEPSQWEHSSIEGKGYLSNIIGTMPLTPFENNLNTNEQETISHLTFHDGSWSDST
GGLEFKFPTDRGMDLLNWIESVNWPNGALISCT
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgacaagaatgcgtatgagaccctggctggaattacagataaattccaatgca
attcctgggttaatttggataaacaaggaaagaaagatgttccaaattccgtggaagcat
gctgccagacatggatggaacatggacacagatgcaagccttttcagaaactgggctata
catacaggaaggtttagacaaggaatagattcaccagagcctaaaacatggaaagccaat
ttccgatgtgccatgaactcactgcctgatatagaggaagtgaaggataagagtgttaat
aaaggctccagtgctattcgagtgtacagaatgctaccacctgttgacaggtcaaagcaa
aaagaaaagaaatccaggtcatccaaagattctaaaagcaagagtaaaaaaaaggagttc
aagtcaaaggtcaagttagaagtgacagagcctgttacgcctaaactaccagttgatcac
accacatatactgcaccagagcaaagtacttcacaggaaatggtggttgacagcacagtg
aatataggagacttttctccatcagaaacatgccctgttgttgattggcctatcaatgaa
atagtcggagaatctgaagatcaggtagtcagcacatgtgacctgtatccatttcagatc
tctcccatgccctctcctacagcaaccagtgcagctgacagctttctgacatcggatgaa
gcttctgaaatcacacaagaacccagtcagtgggagcacagtagcattgaagggaaagga
tacctcagtaatataataggaacaatgccactaactccctttgagaataaccttaacacg
aatgaacaagaaacaatctcccatttgacattccatgatggcagttggtcagattcaaca
ggtgggttagaattcaagtttcctacagacagaggaatggaccttctgaactggatcgaa
tcagtaaactggccaaatggagcactcatcagttgcacttga
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