Chiloscyllium punctatum (brownbanded bambooshark): 140492018
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Entry
140492018 CDS
T11285
Name
(RefSeq) lymphoid enhancer-binding factor 1-like isoform X1
KO
K02620
transcription factor 7
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04310
Wnt signaling pathway
cpun04520
Adherens junction
cpun04916
Melanogenesis
cpun05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
140492018
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
140492018
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
140492018
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
140492018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpun03000
]
140492018
Transcription factors [BR:
cpun03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
140492018
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Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
DUF2582
Motif
Other DBs
NCBI-GeneID:
140492018
NCBI-ProteinID:
XP_072446727
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Position
20:33976597..34216612
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AA seq
524 aa
AA seq
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MPQLNSGGGDDLGANDEMISFKDEGEQEEKASENALTERDLADVKSSLVSESETNQNVNP
ASDLGAIRRSQDNQRIYQDKSRGHIDDALKQRQDGGTFKGSAYSGYPHFLMLQDPYLSNG
SLSPSSNKVPVVQPSHAVHPLTPLISYSNEHFAPSSHSPHLPAEINQKSGLHRSPQGPDL
AALYSLSPGTAGQITPTIGWQGQSVYPITSCGFRQPYSSPLPPSTSISRFPHPLVLGPPG
MHSTGIPHPAIVSASGKPDMSQYDSGLRSMKPNPEPKREKESKKPTIKKPLNAFMLYMKE
MRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNY
VVTPRVSGALSALPSGYSSREGKKKRRKREKQQDSDPDPSSPKKCRARFGLDQRTDWCGP
CRKKKKCIRYLQGEARCSSPVSSDGSVMDCPSPPSNALQPSAETSATLANSTDIAQPAQP
NTVSFSAHSQPNTNLTGLSIPSTLDSHLYNSALLNIPNQHAMTR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctgaacagcggtggaggggatgatctgggggcgaacgatgaaatgatctcc
tttaaggacgaaggggaacaggaggagaaagcctccgagaacgctctcacagagagggat
ttagcagacgtgaagtcatcgttagtcagcgagtcggagactaaccagaacgtgaatcct
gcatccgatctaggggcgatcagacgctcacaggacaatcaaagaatttaccaagacaaa
tccagaggtcacatcgatgacgctttgaagcagcgtcaagatggagggacattcaagggg
tcagcctactcggggtatccccactttctgatgctccaggacccctacctgtctaatgga
tccctttctccatcttcaaacaaggttcctgtggtgcaaccatcccatgcagtccatccc
ctcacacctctcatctcctacagcaatgagcactttgcgcccagttcgcactcaccacac
cttccagcagagatcaaccaaaaatcaggtttgcatcggtcaccacagggtcctgatctg
gctgctttatattctctgtctcctggtactgcaggacagatcaccccgacgataggctgg
caaggtcagtctgtctatccaattacatcatgtggatttagacaaccttactcttcaccg
cttccacccagcacttccatatccaggtttccccatcctctggtgttgggccctccaggc
atgcactctacagggatcccccatcctgctattgtgagtgcttcaggcaaaccagacatg
agtcaatatgacagtgggctgcgatccatgaaacctaatcctgaaccaaaaagggaaaaa
gaaagtaaaaagcctactatcaaaaaacccctcaatgcatttatgctatacatgaaagaa
atgagggcgaaagttgtagctgagtgcactctgaaggagagtgcagccatcaaccaaatc
ttgggtagaagatggcatgctctctcccgtgaagaacaggcaaagtactatgaattggca
aggaaagaacgacaactacacatgcaactttatccaggctggtctgccagggataactat
gtggtgaccccacgggtgtcgggagccctcagtgccttaccaagtggctattcttcacgt
gagggtaaaaagaaaagaaggaaaagagaaaaacagcaagactctgatccagatccaagc
tctcctaagaaatgccgggcacgctttggccttgaccaacggacagactggtgcggccct
tgcaggaagaaaaagaagtgcattcgatacttgcaaggagaagccaggtgctccagccca
gtttcttcagatggaagtgtgatggactgtccttcccctccttctaatgcactccaacct
tcagcagaaacttcagccacgcttgctaactctacagacatagcgcaaccagcacagcca
aatacagtctctttctctgctcattcccagcctaacacaaatctaactggactttctata
ccctctacactggactctcatctatataatagtgctttactgaacatcccaaatcagcat
gcaatgacaagataa
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