Chiloscyllium punctatum (brownbanded bambooshark): 140492129
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Entry
140492129 CDS
T11285
Symbol
thoc3
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03013
Nucleocytoplasmic transport
cpun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140492129 (thoc3)
09122 Translation
03013 Nucleocytoplasmic transport
140492129 (thoc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpun03019
]
140492129 (thoc3)
03041 Spliceosome [BR:
cpun03041
]
140492129 (thoc3)
Messenger RNA biogenesis [BR:
cpun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
140492129 (thoc3)
Spliceosome [BR:
cpun03041
]
Complex C
Other components
EJC/TREX
140492129 (thoc3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
140492129 (thoc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
DSE1_N
RMC1_N
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
eIF2A
Beta-prop_NOL10_N
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
NBCH_WD40
Tricorn_2nd
WDR90_beta-prop_4th
PAC11
PD40
TRM82_WD
B-prop_COPA_B_2nd
Beta-prop_ACSF4
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_1st
Beta-prop_SPT8
ASA1
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_Nup120_160
Beta-prop_NWD2_C
Peptidase_S9_N
DPPIV_N
Beta-prop_ELP1_1st
Cytochrom_D1
WD_LRWD1
Beta-prop_LRRK2
Beta-prop_DCAF4
WDCP
Motif
Other DBs
NCBI-GeneID:
140492129
NCBI-ProteinID:
XP_072447019
LinkDB
All DBs
Position
20
Genome browser
AA seq
323 aa
AA seq
DB search
MAAASYLLESQEHFKNNGRTKEFSAHTAKVHSVAWSCDGRRLASGSFDKTASVFVLDKDR
LVKENNYRGHGDSVDQLCWHPTNADLFVTASGDKTVRIWDVRTAKCVATVNTKGENINIC
WSPDGQTIAVGNKDDVVTFIDAKSHRSKAEEQFKFEVNEISWNNDNDMFFLTNGNGCINL
LSYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWSVDELVCVRCFSRLDWP
VRTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCDSPTFTVAWHPKRPLLAFACDD
KDGKYDSSREAGTVKLFGLPNDS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccagttaccttctggaatctcaggagcatttcaaaaataacggccgcacg
aaggagttctcggcccatacagccaaggtgcactcggtggcttggagctgcgacggtcgc
aggctcgcgtccggctctttcgacaagacagccagcgtgtttgtgctggacaaagaccgg
ctggttaaggagaataactatcgtggtcatggtgacagtgtggatcaactctgttggcac
cctaccaatgcagatctctttgtaactgcctctggtgataaaactgttcgaatctgggat
gtccgaactgcaaagtgtgttgctactgtgaacacgaaaggtgagaacattaacatctgt
tggagccctgatggccaaacaattgctgtgggaaataaagatgatgtagtgactttcatt
gatgcaaaatcacaccgatcaaaggctgaagaacagtttaagtttgaagtgaatgagatc
tcctggaacaatgataatgatatgttttttctaaccaatggcaatggctgcatcaactta
ctcagttatccagagttgaaaccgattcaatcaatcaatgcacatccttcaaattgcatc
tgcattaagtttgatccaacaggcaaatactttgccacagggagtgcagatgctctggtc
agtctttggagtgtggatgaacttgtctgtgtaagatgcttctccagacttgattggccc
gtgagaacattgagcttcagtcatgatggaaaaatgctagcatctgcttcagaggatcac
ttcattgacatcgcagaagtagaaactggtgagaaattatgggaagtgcagtgtgactca
cctactttcacagtagcatggcatccaaaacgaccactcttagcttttgcttgtgatgat
aaagatggcaagtatgacagcagtcgggaagccggaacagttaaactctttggacttcct
aatgactcctga
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