Chiloscyllium punctatum (brownbanded bambooshark): 140493480
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Entry
140493480 CDS
T11285
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04136
Autophagy - other
cpun04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140493480 (atg13)
04136 Autophagy - other
140493480 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpun04131
]
140493480 (atg13)
03029 Mitochondrial biogenesis [BR:
cpun03029
]
140493480 (atg13)
Membrane trafficking [BR:
cpun04131
]
Autophagy
Autophagosome formation proteins
ULK complex
140493480 (atg13)
Atg1 complex
140493480 (atg13)
Mitochondrial biogenesis [BR:
cpun03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
140493480 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
140493480
NCBI-ProteinID:
XP_072448056
LinkDB
All DBs
Position
22:31486332..31572350
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AA seq
553 aa
AA seq
DB search
MDGELSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLNGLGEGFQTVRVGMVGTPV
GTITLSCAYRTNLAFMSGRQLERTQPIMGIIIDHFVDRPYSGSSPLHPCNYRTTGEDDGG
NFPSVDDSQEVCTTSFSTSPPSQCVFTVSKTHFQTPRPVVMDTLKVPLLGLTFTHQLYSS
RLFYQPFATLGGGSADLACCPAALTAGVNTAHPHQMVIPSKEGGIPVLPLHPAPGVQADG
ERVPTCNLTDMNQHAATTPSSSGEAELLSKSSEGKSGTPQDVLETTFTRKVGAFVNKPAS
QVTAANMDLPFAVFAPKIVESEDTDVMVNPPDSPILESPLHASLHSDQSSGSSGLTQDEF
VMVELKPAFSKDDFLPMDLGTFYREFQNPPQLSSLSIDISAQSMAEDLDSLPEKLAIYEK
NMEEFDAFVDTLQ
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgaactgagccctcaggataagaaggatctggataagttcattaagttcttt
gccctgaagaccgtccaggtaattgtgcaagcacggcttggagaaaagatatgtacccgt
tcatcctcctctcctacgggctcagactggtttaaccttgcaataaaggacataccagaa
gtcacccatgaggctaaaaaagcactagcaggccaacttcctggaattggacggtcaatg
tgtgtagaaatctctctcaagacgtctgagggagattcaatggaactggaaacatggtgt
ttggaaatgaatgaaaaatgtgataaagaaattaaggtttcttacactgtctacaacaga
ctgtctttgctactgaagtcacttcttgcaatcacgagagtgacacctgcatataaacta
tctagaaagcagggacatgactatgtaatcctgtacaggatatattttggagaagtacaa
ctgaatggcctgggtgaaggttttcaaacagtacgggtcggaatggttggaactcctgtt
ggtactatcacgctgtcgtgtgcataccgaactaatctggctttcatgtctggcaggcag
ctggagcggacccagccaatcatggggattatcatagaccactttgtagatcgtccctat
agtggatcttcaccactacacccatgtaactacagaacaactggtgaagatgatggaggt
aattttccttctgttgatgactcccaggaagtctgcaccacatctttctctacttctcct
ccctcacagtgtgtgtttactgttagtaaaacacattttcagactcccaggccagtggtg
atggacactctgaaggtccccctgctaggcttgacctttacgcatcaactctacagctca
cgtcttttctatcagccttttgctactcttggtggtggttcagctgatctagcctgttgc
ccagcagccttaactgctggtgtaaatactgctcatccacatcagatggtaattcctagt
aaagaaggaggcatacctgttctgcctctacatcctgcccctggtgtccaggctgatggt
gaaagagtgcctacctgtaatttgacagacatgaatcaacatgcggcaacaacaccttcc
agcagtggtgaagcagaattgctatcaaagagtagtgaaggaaaaagcgggacacctcag
gatgtgttggaaactacctttacaaggaaagtgggagcgtttgttaacaaaccagccagt
caggtcactgctgccaatatggatttaccatttgctgtatttgcaccgaaaattgttgaa
tctgaggacactgatgtcatggtaaatccgcctgattctcctattctagaatcacctctg
catgccagtcttcattcagaccagtccagtgggagcagtggcctcacacaggatgaattt
gttatggtggaacttaagccagccttttccaaggatgattttctgcctatggatctgggt
accttttatagggaatttcagaaccctcctcaactgagcagcctctcaatagacatcagt
gcccagtcaatggccgaggatctggattctttgcctgagaagctggcaatctatgagaag
aatatggaagaatttgatgcctttgtagacactctgcagtaa
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