Chiloscyllium punctatum (brownbanded bambooshark): 140493539
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Entry
140493539 CDS
T11285
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03022
Basal transcription factors
cpun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140493539 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
140493539 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpun03021
]
140493539 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
cpun03400
]
140493539 (gtf2h1)
Transcription machinery [BR:
cpun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
140493539 (gtf2h1)
DNA repair and recombination proteins [BR:
cpun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
140493539 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140493539
NCBI-ProteinID:
XP_072448189
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Position
22:complement(39937354..40008582)
Genome browser
AA seq
547 aa
AA seq
DB search
MATSSEEVLLIVKKVRHKKQDGALYLMAERVAWTPEGKDRFVISHMYADIRCQKISPEGK
AKVQLQLILHTGDTTIFHFTNDNSASAAAKDRDAAKDLLQQLLPKFKKKANKELEEKNRM
LQEDPVLFQLYKDLVVSQVISAEEFWANRLAGNSVDNSVSGNKQDIGVSAAFLADIRPQT
DGCNGLRYNLTSDIIESIFRTYPAVKQKYAENVPHNMTEKEFWTRFFQSHYFHRDRINAG
SKDLFSECARIDEKGLKTLVSQGVKNPLVDLTSLEDKSLGEGYGSSAPTSSKPNKESSNA
AIIRRFNHHSAMVLAAVLRKQETQNDQSNENNSTDGNSRDSDCFQPPVKKVKLQEAIEYE
DLGEKNSKKTVALNLKKADRYFHGPTPVQSQHYTSSQDIINSVHCIRQEMANYNPNLAQV
LSSSMASSAITDLSPGGVLMQGGTSQAVNQIMPSDVQMELKHLYVAVAELLRHFWSCFPV
NTPFLEEKVGKMMNNLERFQMTKLRPFREKLQKLYISTNLTGHLEDMLQVAFSKFHAWQS
KRMLKKT
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggccacttcatcagaggaggttctgctcattgtgaagaaagtacggcataaaaaacag
gatggggcgttatatctgatggcagagcgtgtagcatggacaccggagggaaaggatcgt
tttgtcattagtcacatgtatgcagatatccgctgtcagaagattagccctgaagggaag
gcaaaagttcagcttcagctgattttacatacaggtgacactacaatcttccatttcact
aatgataacagtgctagtgcagcagccaaagaccgtgatgctgcgaaggacttgctccaa
cagctgctccctaagttcaagaaaaaagccaacaaggaactggaggagaaaaacagaatg
cttcaggaggacccagttctctttcaactctataaagacttggttgtaagccaggtgatc
agtgctgaagagttttgggccaaccggctggctggaaattccgtggataactctgtctct
ggtaacaagcaggatattggagtttctgctgctttcctggcggacatcagacctcagact
gatggctgtaatggcctcaggtataatctgacctctgacatcattgaatccatttttcgg
acttatcctgctgtgaaacagaagtatgcagagaacgttcctcacaacatgactgagaaa
gaattctggactcgcttttttcagtctcactacttccacagggataggatcaatgctggt
tcaaaggatcttttctctgaatgtgccaggatcgatgagaaaggtttgaagactctggtt
agtcagggagtgaagaaccctctggtggatttgacatcgctggaggacaaatcattgggt
gagggttatggatcctcagcacctacatcctccaaacctaacaaggaaagcagcaatgct
gctattatccgtcgcttcaatcatcatagtgccatggttctggcagctgtccttcgcaaa
caagaaactcaaaacgatcagagcaatgagaacaacagcactgatggtaattcccgtgat
tcagactgcttccagccaccggtcaagaaggtgaagctgcaggaagcgatagagtatgaa
gatttgggagagaagaattcaaagaagacagttgcattaaatttgaagaaagcagacaga
tatttccatggtccaacgcctgttcagtctcaacattacacatctagccaggatatcatt
aattcagtgcactgtattcgacaagaaatggcaaattacaatcctaatcttgctcaggtt
ctgtccagcagcatggctagtagcgcaattactgacttgtcacctggtggagtgctcatg
cagggaggaacatcccaagctgtaaaccagattatgccaagtgatgtccagatggaactc
aaacatttgtatgtagcagtggcggagttactgagacatttctggtcctgttttcctgtc
aatacaccattccttgaggagaaggttgggaaaatgatgaataacctggaaagatttcag
atgacaaaactacggccattccgagagaagctgcagaagctatacatcagtacaaacttg
actggccatttagaagatatgctacaggtagctttcagtaaatttcatgcttggcaatca
aaaagaatgctaaaaaagacgtga
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