Chiloscyllium punctatum (brownbanded bambooshark): 140494147
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Entry
140494147 CDS
T11285
Symbol
ncam1a
Name
(RefSeq) neural cell adhesion molecule 1a isoform X1
KO
K06491
neural cell adhesion molecule
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cpun04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
140494147 (ncam1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
140494147 (ncam1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpun04131
]
140494147 (ncam1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpun04515
]
140494147 (ncam1a)
04090 CD molecules [BR:
cpun04090
]
140494147 (ncam1a)
00536 Glycosaminoglycan binding proteins [BR:
cpun00536
]
140494147 (ncam1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cpun00537
]
140494147 (ncam1a)
04091 Lectins [BR:
cpun04091
]
140494147 (ncam1a)
Membrane trafficking [BR:
cpun04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
140494147 (ncam1a)
Cell adhesion molecules [BR:
cpun04515
]
Immunoglobulin superfamily
NCAM1/2
140494147 (ncam1a)
CD molecules [BR:
cpun04090
]
Proteins
140494147 (ncam1a)
Glycosaminoglycan binding proteins [BR:
cpun00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
140494147 (ncam1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cpun00537
]
Others
140494147 (ncam1a)
Lectins [BR:
cpun04091
]
I-type lectins (Siglecs)
140494147 (ncam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
Ig_DSCAM-DSCAML_C
Ig_4
C2-set_2
Ig_6
Ig_5
C2-set_3
Adeno_E3_CR1
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
140494147
NCBI-ProteinID:
XP_072449295
LinkDB
All DBs
Position
23:74653620..75150894
Genome browser
AA seq
1155 aa
AA seq
DB search
MLQTRIFLTGLLFISTTAALQVDIMPSQGEVSVGDSKFFLCTATGDVSSISWYLPNGQKI
DPNQQRIAVATVNEISSSLTLYSARIDDAGIYKCVATSKDGNDSEATVNVKIYQKLEFRN
APSPQEFKVGDDAVVICDSVSSPPPTITWKHRGRDVLMKKDDRFTMLPNNYLQIRRIKKT
DEGTYRCEGIIAARGEIKFKDIRVIVNVPPSIHPRDMVVNATAHSGQSVTLTCDSDGFPQ
PEVTWMRDDVVIEADGNKYIMNEDGSELTINKISKRDDGDYICIAQNKAGDAELEITLRV
FVKPEITYVENKTAVELEEQITLTCEAKGDPTPTIVWMKGTHTYKDGEQASWTRPVTRKT
MDGRIEVQSHARVSSLTLKDIQHTDSGEYICKAKNSIGQDSESMYLEVQYAPKLQGTVTV
YTWEGNAVNITCEVLAHPVALVTWFRDGQQLPSSNYSSIKIYSTRSTNYLQVTPDSENDF
GPYNCTASNRVGVESKEFILVQAETPSAPTILDTVPYSSTVQVKVEEPESTGGVPILKYL
VEWKEKDTEEWFTKNADAREVLRSDNVIMVSGLTPETMYSLRLSAINGKGIGDASQITKF
KTEPVLFTVEPTTLPPSSFSPLDSAREPSPPKLEGKVLGSGNVFKVNWIKQDDGGSPIQH
YLVRYKAKHHSDWKPEMRLPSDSEYVILANLEWNSEYEVYVVAENLQGKSEAGSVSFRTS
VEPTVIPEVDPSDGSGLGTGAIVGILIVVFLILLVAVDVTCYFINKCGLLMCIAVNFCGQ
PGPGSKGKDMEEGKAAFSKDESKEPIVEVRTEEERTPNHDGGSQTEPNETTPLTEPEHAA
DTQATVEDMLPSVTTVTTNSDTITETFATAQNSPTSETTTLTSSAALPASTTPEPSPASA
APPHSPKAAVASPTSPSTKSQTETTPIVAPLVDLSDAPVSVSATPASAPASVSSPPSSTP
TSSNPVSNVNSNQASAPPVAGAAEEVTKGPANNKSGPVPSPGNPASPPATSAQQQPKPEA
PTTTKSPEIEAAKPNPVKSPVEPTNNSTSVKNEAATDSSKKPSQGEDFPVDGGTFKTSDI
DLAKDVFAALGTSSLPTMAGGKAADLAPSIADAALPSAPAKEEKVPLEDKPKQEGTEVKT
VPNEASQTNENESKA
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaaccaggattttcctaaccgggctactctttattagcaccacagccgcactg
caagttgatatcatgccatcccaaggagaggtcagtgtgggagattccaaattttttcta
tgcactgcgactggagatgttagcagcatttcctggtatctgcctaatggtcaaaaaatt
gatccaaatcaacaacggattgctgttgcgacagtaaatgaaatatcctccagcctgact
ctctacagtgccagaattgatgatgctggcatttacaaatgtgtggcaacatcaaaagat
gggaacgactcggaggctacagttaatgttaagatctaccagaaacttgaattcagaaat
gccccttcaccacaggagttcaaagtgggtgatgatgcagttgtcatttgtgattctgtc
agttcacctccaccgaccatcacttggaagcacagaggcagagatgttctaatgaagaaa
gacgatcgttttactatgcttcccaacaactacttgcaaattcgccgtattaagaagaca
gatgaagggacttacagatgtgaaggaataattgctgcccgtggtgaaatcaaattcaag
gatataagggttattgttaatgttcctcccagcatacatccccgagacatggtggtgaat
gccacagcgcacagtggccagtctgtgacattgacttgtgattcagatggattcccacag
ccagaggtgacctggatgagagatgatgtggtaattgaagcagatgggaataaatacatt
atgaatgaagatggctctgaactcacaatcaacaaaatcagtaaaagagatgacggagat
tacatctgcattgcacagaataaggctggagacgctgagcttgagatcactctccgagtg
tttgtgaaacctgaaattacatacgtggaaaacaagactgcagtagagctggaagaacag
attacattgacctgtgaggctaagggtgaccctaccccaaccattgtctggatgaaaggc
actcacacctacaaggatggagaacaggcttcatggacacgacccgtgactcgaaagacc
atggatggaagaattgaagttcaaagccatgctagagtttcttccttgactctcaaggac
attcagcatacagattctggagaatatatctgcaaggcgaagaattcaattggccaggac
tctgagtcaatgtacttggaagtacagtatgctccaaagctacaaggcacagtgactgtc
tacacctgggagggtaacgctgtgaatattacctgtgaggttctggctcaccctgttgct
cttgttacctggtttagagatggacagcaattaccaagctccaactacagcagcattaag
atctacagcacacgatccaccaactaccttcaggtcacacctgattcagagaacgacttt
ggcccatacaactgcacagcgagcaaccgtgtaggtgtagaatctaaagaatttatcctc
gtgcaagctgagaccccgtctgctcccacaatcctggatacagtaccctattccagtact
gtgcaagttaaggttgaagaacccgaatcaactggtggtgtgccaattctgaaatacttg
gtggaatggaaagagaaagacactgaagaatggttcaccaagaatgctgatgcaagggaa
gtcctacgttcagataatgtgattatggtgagtggactaaccccagaaaccatgtatagt
ctgcggttatctgctatcaatggaaaaggaattggtgatgccagccagatcactaagttc
aagacagaaccagttctattcactgttgagccaaccactctgcctccatcttctttttca
ccacttgattcagctagagaaccaagtccaccaaaacttgaaggaaaagtgctcggcagt
ggaaatgtcttcaaagtaaattggatcaagcaggatgatggtggttcccctatccaacat
tatttggtcagatacaaagctaaacatcactccgactggaaacctgagatgcgattacca
tctgacagtgaatatgttattctcgcaaatctggaatggaactctgaatatgaagtttac
gttgttgctgagaacctgcaaggcaagtcagaagctggttctgtctccttccggacctca
gtagaacccactgtcattccagaagttgatccatcagatggttcaggtctggggactggc
gccattgttggcatccttattgtcgtcttcctcatcttgctcgttgctgttgatgtcacc
tgctacttcattaataagtgtggcctgctgatgtgcattgctgttaatttctgtgggcag
cctggtccaggatccaagggaaaggacatggaagaaggaaaagctgctttctcgaaagac
gaatcaaaggagccgattgtggaggtacggactgaggaagaacgaactcccaatcacgat
ggtggaagccaaactgaacccaatgaaaccacaccactgacagagcctgagcatgcagca
gatacccaggctactgtcgaagacatgttgccttctgtcaccacagtaaccactaactct
gacactatcactgaaacttttgccactgctcaaaacagtccaacgagtgaaacaacaaca
ctcacttccagtgctgcactcccagcctcaaccacacctgagccatcaccagcttcagct
gctccacctcactcacccaaggcagctgtagcatcacctacttcaccttccaccaagtct
caaaccgagaccactcccattgttgctccccttgttgatcttagtgatgccccagtctct
gtttctgcaactcctgcttctgccccagcctcagtttcttcgccgccttcttccacccca
acctccagtaatccagtctcaaacgtcaattccaaccaagcctctgccccaccagttgcc
ggagcagcagaggaggtgacaaaaggtcctgccaataacaaatccggtccagttcccagc
cccggaaacccagccagtcccccggctacatcggcacagcagcaacccaagccagaagct
ccaacgactaccaagagcccagaaatagaagctgcaaaacctaacccagtgaagagtcct
gtggagccaacaaataactccaccagtgtgaagaatgaggctgctacagacagcagcaaa
aaaccctcccagggtgaggactttccagttgacggagggaccttcaagacctcagacatt
gaccttgcaaaggatgtttttgcagctcttggcacttcttctcttcccactatggctggt
gggaaagctgctgaccttgctccttccattgcagacgccgctttaccatctgctccggca
aaggaagagaaggtcccattagaggacaagcccaaacaagaggggacagaagtaaagacg
gttcctaatgaagcctcacaaacaaatgagaatgaaagcaaagcatga
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