Chiloscyllium punctatum (brownbanded bambooshark): 140494465
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Entry
140494465 CDS
T11285
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
140494465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpun04121
]
140494465
Enzymes [BR:
cpun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140494465
Ubiquitin system [BR:
cpun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
140494465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
ANCHR-like_BBOX
zf-RING_5
zf-RING_2
FUT8_N_cat
zf-RING_6
U-box
Dict-STAT-coil
Rx_N
MetOD2
PilJ
Motif
Other DBs
NCBI-GeneID:
140494465
NCBI-ProteinID:
XP_072449765
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All DBs
Position
24:complement(39345532..39375978)
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AA seq
536 aa
AA seq
DB search
MATGLAQEALGEELTCAICLEIYTDPVILDCKHSFCQSCIEETWNDTAAAPYCCPECRAE
YTERPGLERNFKLANIVQKYLALEVSQDAVLCNYCTEKIRPAVKTCLKCDASMCPEHLRH
HTESTVFKSHLLVDPTADVSQWKCTEHQELLKIYCKEDKVCVCTLCTVFGKHKGHNCGSI
SEGEKELRNHLQHQLQKIRNNVEAVHLALSDLHKEKKNAQSMKKVVQMKIKAKYETLRKH
IDKEERRILRYLESEQSRVTTEIDVKICNLEKKVKDFEKSFTDLSDLLKHNEDLVFIQGL
NSMADRMKDASEPFIAQIPNADINVSVVERLSEWVQQQYITAPQPALGRNFLVSMYGQTP
TLDPHTAFPHLILSDSNRSVSGSKRQQPYSDSPKRFNYWWQILCTERLSYGRCYWEVEIG
GDRRRWDVGMCYESLSRKGKGKECSLGQNKESWCLYSEPGSLAALYDNNATKLTAQMPTR
VGVYVDFEAGIISFYSVSDRKLTLLHNFREQTFTKPLYPALGVADFTTSLALCGLK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccggtttagctcaggaggctttaggggaggaattaacctgtgctatttgtctg
gaaatttacactgaccctgtgatactcgactgtaaacacagcttctgccaaagctgcatt
gaggagacctggaatgacacggctgcagccccttactgctgtcctgaatgtagagcagag
tacaccgagaggcccggccttgagaggaactttaaactggcaaatatcgttcagaaatac
ctggctctggaggtctcccaggatgctgttctgtgtaactattgcactgagaaaatacgg
ccggcagtgaagacctgcctgaagtgtgacgcttccatgtgcccggaacatctcagacat
cacaccgagagcactgtgtttaaaagccatctccttgtagatcccactgcagatgtgtcc
cagtggaaatgtacagagcaccaggagctgctgaagatttactgtaaggaggataaggtg
tgtgtctgcactctctgcactgtatttgggaaacacaagggccacaattgtgggagcatc
agcgagggagagaaggagctcaggaatcatttacaacatcagcttcagaagattcggaac
aatgtcgaagcagtacaccttgctctaagtgatcttcacaaagagaaaaagaatgcacag
agcatgaaaaaagttgtacagatgaaaattaaagcgaaatatgagacactgaggaagcac
attgacaaggaagagaggcggatactgcggtacctggagagtgaacaaagccgtgtgact
acagagattgatgttaagatctgcaatctggaaaagaaagtgaaagactttgaaaagtct
tttactgatctcagtgaccttctgaaacacaatgaagatcttgtatttatccagggtctc
aattccatggcagaccgaatgaaggatgcatctgagcccttcatagcacagattcccaac
gcagacattaatgtatctgttgtagaaaggctgtcagaatgggtccagcagcagtatata
acagcaccccaaccagccctgggcaggaacttcctggtcagtatgtatggacagacacca
actctagatcctcacacagcatttcctcacctcattctgtcagacagtaaccgatccgta
tcaggatcaaaacgccagcaaccgtattctgatagcccaaaaaggtttaactattggtgg
cagattctatgtacagagagattgagctacggtcgctgctactgggaagtggagatcgga
ggagatcgccgtcggtgggatgttggaatgtgttatgagagcttgagtcggaaaggcaaa
gggaaagaatgctcactgggacagaacaaagagtcatggtgtctatactcagagccagga
agccttgcagccttgtacgataacaatgccactaaactaactgctcaaatgcccacaaga
gtgggagtctatgtggactttgaggctggaataatctcattttacagtgtgtctgacagg
aaactaacactgctacacaacttccgggagcaaacatttactaagcccctctatccagct
ctgggggtggctgatttcacaacatccctggcattgtgcggtttaaagtaa
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