Chiloscyllium punctatum (brownbanded bambooshark): 140494562
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Entry
140494562 CDS
T11285
Name
(RefSeq) zinc finger RNA-binding protein-like isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpun03041
]
140494562
Spliceosome [BR:
cpun03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
140494562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
140494562
NCBI-ProteinID:
XP_072449972
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All DBs
Position
24:57201404..57285737
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AA seq
1050 aa
AA seq
DB search
MIPICPIVSFAYVPGRLGEDAKMAASNYYGFAHGGTQYSAQPATGIAYSHPSTPASYTVQ
QAPPTAHAVTAAYAPVPATQAVRPVTSAAYGSYPAVHSVTDYNYGQRPPETTPQPTPATT
QNYQQYYAQGGNSDKTEWGWMTDLIYGSSKDSYSYARSTATAPSYDKQYYQQPVSAAAQP
QQTATDSYYQTIAPKTSFSQSGTLYTQSQQSRQVTAIKPASTPIPVTTSFTVYPVVTTVQ
PTAQPTAAVATAAVSYTQTPTYNTTPVSYSGSSYSGYEAAVYSAATSYYQQPQKPSATTW
TSTGIGTGTSANTGSTFIKKTTFQNKQQKPKPPPKQPQLHYCDVCKISCAGPQTYREHLE
GQKHKKKEAALKGGSQTTSGPRGAQGQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHT
KLGKPIPSTEPVVVNSTSAAVNKPVSSVTTTATVPTPIQMPPKSAAAFTNNTSKPPALIV
KKPVTPKITFIGGNKLQTMGNKMEEVKVPNAKPEPQMQEFKPEQTAAPVPASTIPAQLQN
DVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKDMHLKGRRHRLQYKKKVNPDLQ
VEIKPSIRARKIHEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEEMYWRRVEEEHIYWE
EQRRRLTPDWHPPPLMGRLGMPQAPTPMPPRRPDSSDDRYIMTKHASIYPTEEELQAVQR
IVSQTERALKLVSDVISDQEGLKDGENKEKGKGDLGARVLKGVMRVGVLAKGLLLRGDRN
VNLILLSAHKPTKALLEKISANLPKQLLTITEESYELKTCPSESCIILSTCKEPKMQVKI
SLTSPVMRDDLVKDKDATSAPVQDPSDVLNKQKCLEGLAALRHAKWFQARANGLQSCVII
IRILRDLCQRVPTWGALPDWAMELLVEKAISSSSGPLSPGDAMRRVFEAVASGVLLPDGP
GLLDPCEKDHSDALSCMSHQQREDITASAQHALRLLAFRQIHKVLGMDPLPQPKLRFNMR
NRKRRRDTSETAEGEGEGKKDKKDSDAGDV
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgtccgatagtctccttcgcttacgtgcccggccggttgggcgaagac
gccaagatggcggcgagtaactactacggattcgcgcatggcggcactcagtacagtgca
cagcctgccactggcattgcatattcacatccatccacaccagccagttacaccgtacag
caagctccaccaacagcccatgcagtcactgcagcatatgctcctgtacctgccacgcaa
gcagtgagaccagtgacctcagcagcttatggaagctatcctgccgtgcattctgtgaca
gattataactatggacaaaggccaccagaaactacaccacaaccaacaccagcaacaaca
caaaactatcagcagtactacgcacaaggaggaaattcggacaagacagagtggggttgg
atgacagacttgatctatggttcatctaaggacagttacagttacgcacgttccacagca
acagcaccaagttatgataaacagtactatcaacaacctgtctcagctgctgctcaacct
cagcagacagccacagattcttactaccagacaatagcccctaaaaccagtttcagccaa
tctggaacactgtacacacaatcgcaacaatcaagacaagttactgcaataaaacctgca
tccactccaatcccagttacaaccagctttacggtgtatccagtggtaacaacagtacaa
ccaactgcacaacctactgcagcagtagccacagctgctgtatcatatacacagacaccc
acatacaatacaacaccagtcagttattcagggtcaagttactctggatatgaagctgct
gtgtattctgctgctacttcatactatcaacaaccacagaaaccatcagccaccacttgg
accagcactgggatcggaacaggaaccagtgccaatacaggaagcactttcatcaaaaaa
acaactttccagaacaaacaacaaaaaccgaagccaccacctaaacaacctcagctacac
tattgtgatgtctgtaaaattagctgtgctggcccacagacttatagggaacatttggaa
ggccagaagcacaagaaaaaagaagcagctttaaaaggtggaagtcagactacgagtgga
ccacgtggtgcccagggtcaactacgatgtgagctgtgcgatgtatcgtgcacaggtgca
gatgcctatgctgcacatatccgaggtgccaagcaccaaaaggttgttaaattgcatacc
aaattgggtaagccaattccttcaactgagccagttgtagtaaattcgacatcagctgct
gtgaataagccagtgagcagtgttactactacagctacagtaccaacaccaatccagatg
cctcccaagtcagctgctgcattcactaataatacaagcaaaccacctgcattaatagtg
aagaaacctgtaacacccaaaataacatttattggaggaaacaaattacagacgatggga
aacaaaatggaagaagttaaagtcccaaatgctaagccagagccccagatgcaggaattc
aagcctgagcagaccgcagcaccagtgccagcttccactatcccagcgcagcttcagaac
gatgtccagcctgtaggccacgattatgtagaagaggtccggaatgatgaaggaaaagtg
atcagatttcactgtaagctttgtgaatgtagttttaatgatcctaacgcaaaggatatg
catttaaaaggtcgtaggcatagactgcaatacaagaaaaaggtgaatccagaccttcaa
gttgaaataaaaccaagtatccgagccagaaaaatccatgaggagaagatgagaaaacaa
atgcagaaggaggagtactggagaaggagagaggaggaggagcgctggcgaatggaaatg
aggcggtatgaagaggagatgtattggaggagagtggaagaagagcacatttattgggaa
gaacagcgtcgcagattaacacctgactggcacccgccaccgctcatgggaagactgggc
atgccacaagcaccaactcctatgcctccccgccgccctgattcttcagatgatcgttat
atcatgacaaaacatgctagcatttatcccactgaagaagaattacaagccgtgcagagg
attgtgtctcaaacagaacgggctctcaaacttgtgtcagatgttatttctgaccaagaa
ggtcttaaagatggagaaaataaggagaaggggaaaggtgaccttggagcacgtgtgctg
aaaggggtcatgcgtgttggtgtgctggcaaaaggattacttctccgtggtgacaggaat
gttaaccttattcttctctctgcccacaaacccacaaaagcccttctggaaaaaatttca
gcaaatctgcctaaacaactcctgaccataacggaggagtcttatgaattgaaaacttgc
cctagtgagtcttgcatcatcctttctacatgcaaagagccaaagatgcaggtcaaaatt
tcactgacgtcccctgtcatgcgagatgatcttgtgaaggataaagatgcaacttctgcc
ccagtgcaagatccatcagatgtactgaacaagcaaaaatgccttgagggtctggctgca
cttcgtcatgccaagtggttccaggctagagctaatggcttacaatcttgcgtgatcatc
atacgaattctgcgtgacctctgccaacgagtgccaacttggggggccttaccagattgg
gctatggaattgcttgtggagaaagccatcagcagttcttcaggccctctgagtcctggt
gatgcaatgcgaagggtatttgaagctgttgcctctggagttctccttccagatggccct
ggacttttggatccatgtgaaaaagaccactcagatgctttgtcctgcatgagccatcag
caacgagaggatattacagcgagtgcacagcacgcattgaggttgttagcatttcggcag
attcacaaagttcttgggatggacccactaccccaaccaaagcttcggtttaatatgaga
aaccgcaaacggagacgggacaccagcgagacagcagaaggggaaggggaaggaaagaaa
gacaaaaaggacagtgatgcaggagacgtctag
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