Chiloscyllium punctatum (brownbanded bambooshark): 140494605
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Entry
140494605 CDS
T11285
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03018
RNA degradation
cpun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140494605 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
140494605 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpun03019
]
140494605 (lsm7)
03041 Spliceosome [BR:
cpun03041
]
140494605 (lsm7)
Messenger RNA biogenesis [BR:
cpun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140494605 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
140494605 (lsm7)
Spliceosome [BR:
cpun03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
140494605 (lsm7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
140494605
NCBI-ProteinID:
XP_072450064
LinkDB
All DBs
Position
24
Genome browser
AA seq
104 aa
AA seq
DB search
MMADKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYVRDPD
DQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggataaggagaagaaaaagaaggagagcattctcgacctctccaagtacata
gacaaaacaatccgtgtgaaatttcaaggcggacgagaagccagtggaattttaaaagga
tttgatccacttctcaatcttgtattggatggaacaatagagtatgtgagagatccagat
gaccaatacaaattgactgaagacacacgacagcttggcttggttgtatgcagaggaaca
tcagttgttctgatttgcccacaggatgggatggaggctattccaaaccctttcatacaa
caacaagatggttaa
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integrated database retrieval system
