Chiloscyllium punctatum (brownbanded bambooshark): 140494837
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Entry
140494837 CDS
T11285
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpun03009
]
140494837 (ddx49)
Enzymes [BR:
cpun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140494837 (ddx49)
Ribosome biogenesis [BR:
cpun03009
]
Eukaryotic type
90S particles
Helicases
140494837 (ddx49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
140494837
NCBI-ProteinID:
XP_072450608
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All DBs
Position
24:89066758..89093000
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AA seq
484 aa
AA seq
DB search
MADSLVALGLGAWLSEQSERLGIRQPTPVQQHCIPAILRGQDCMGCAQTGSGKTAAFVLP
ILQKLSEDPYGIFCLVLAPTRELVYQIAEQFRVLGKPLGLKDCVVVGGIDMVSQALELSR
KPHVVIATPGRLADHIRSSDTFNLKKIKFLVLDEADRLLEQGCTDFTQDLELILSAVPAK
RQTLLFSATLTDTLQELKKIAMNKPFFWESKTEVRTVTELDQRYLLVPERVKEAFLVQII
QKFQDEHEDWSIIIFTNTCKMCQILNMMLRRFNFPCGALHSMMKQKQRFSTLAKFKSSIF
KILVATDVASRGLDIPTVHVVINHNTPGLPKIYIHRVGRTARAGRHGISITLVTQYDIYL
VHAIEQETKMKLKEFLVDEEDVLKILTHVNVTRRECEIELESTDFDEKKEINKRKQMILE
GKDPDVELKRKMELEKIKERKRKFQQRICETLERQTATRLKHKLLKKKRKQAKRAGQVLV
GAGI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagcctggtcgcgttaggcctcggggcttggctctcggagcaaagtgaacgg
ctcgggatccggcaaccgacccccgtgcagcagcactgtatcccggccattctccgggga
caggactgtatgggctgtgcccaaactggcagtgggaaaacggcagcatttgttctccca
atccttcagaagctgtcagaggatccatatggaatattctgcttggtgctggctcccacc
agggagttggtctatcagattgctgaacagtttcgagtcctggggaaacctctgggtttg
aaggattgtgttgttgttggtggaattgatatggtctcacaggctctagaactctccaga
aaacctcatgttgtcatcgcaactccaggccgtctggctgaccacatccggagtagtgac
accttcaacttgaagaaaataaagtttctggtgttggatgaagctgatagattactggag
caaggctgcacagatttcactcaggacctggaattgattctcagtgctgtcccagccaaa
cggcaaactctcctgttcagtgcgacccttactgacacgttacaggagctgaagaagatt
gccatgaacaagcctttcttctgggaatcaaagacagaagttcgcacggtgacggagttg
gatcaacgttatctccttgttcccgaacgggtgaaagaagctttcctcgttcagattatc
cagaagtttcaggatgaacatgaggattggtccattatcattttcacaaacacatgcaaa
atgtgtcagattttgaacatgatgttgcggaggttcaactttccctgtggagccctacac
tcaatgatgaagcagaagcagcggttttccacacttgcaaagttcaagtcgagcattttc
aagatccttgtggccacagatgtcgcttctcgtggtctcgatattcctacagtccatgtt
gtcatcaatcacaacacacctggactgccgaaaatctacatccaccgtgttggccgcaca
gcccgagcaggtcgtcatggcatctctatcactctggttactcagtatgacatttacctg
gttcatgcaattgagcaggaaacaaagatgaaactgaaggagtttttggtagatgaggag
gatgtgctgaagattctcacacacgtgaatgtgactcggcgagagtgtgagattgaactt
gagtcaactgactttgatgaaaagaaggaaatcaacaaaaggaagcagatgattttagaa
ggaaaggaccctgatgtagagttaaagagaaaaatggagctggagaaaataaaggaaaga
aagaggaaatttcagcagagaatatgtgagactttggagagacagacagcaactcgactc
aaacacaagctgctgaagaagaaaagaaaacaagcaaagagagcagggcaagttttggtt
ggagctggaatctga
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