Chiloscyllium punctatum (brownbanded bambooshark): 140495690
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Entry
140495690 CDS
T11285
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
140495690
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpun01009
]
140495690
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpun04515
]
140495690
Protein phosphatases and associated proteins [BR:
cpun01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140495690
Cell adhesion molecules [BR:
cpun04515
]
Cadherins
Protocadherins
140495690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
140495690
NCBI-ProteinID:
XP_072450775
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Position
25:9064272..9104546
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AA seq
877 aa
AA seq
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MDLKGTFCVDYTGSVLQKLIYIILTILCHNINSHLAIELEYKVQENESEGVFIGNVAKDI
FLTSATACDSLAYKLMKEMDYVMLKPESGELFTTKQRIDREILCPIKFRGDPCVQQVNVV
ILCADQYLQMVKVKIVILDVNDNAPYFAEQVMKLSIPEDAAAGTSFGIDYYAIDNDTGEN
SIKHYYLENSQNVFGLNDDETPAIVVQQPLDREVKDLYEMKIVAVDGGVPPLSGTATLLI
NIQDINDNCPVFNASEFDIQIPENMSSNSVVTQLHAVDADLGPNAEITYSYGNRVQDVSR
KLFILDSDTGLIIFSGNKSPEIPPIHKLTVLANGPGCAPAIVQITVSVMHNSKYSPKLEI
SYIANQADGVIYLKETAPENTPIALLEVTDPDHYLKGTIYISGNVPFYLKPYERSRNKHL
VVTSQLLDHELENQYKIVIKAEDPRSLHELTIHVKIIDENDNSPEFYQSSFEASIEENNT
PGAFLLKISATDADSGKNGEVTYHLGPDALPIFSIEQLTGNVTVSTALDREKEKLYRFSV
SAVDHGIPPRKRSTIVIIHVLDQNDNIPSFLTNDYTFFIPENFPRHGEIGVINVTDLDEG
ANGDVTVSILSSTSNFLMDNTRGILRCNSSVDREKNTMHVFWVEAVDGGKPPLSATAKIT
VFVLDINDNPPTVLLPQSNISWLLVPPNTPQGTAVAEIYAIDYDAGINAVMTYTIVGRNG
PAPHVFGINTATGNITLQEKLLSKDYGLYQLLVKVSDLGQPQPLHSTVMVNLFVNETVTN
KSYLEDLLHRRTVFTEEVQTEPNPCPLLQTLDIPCSPPIIPIAITMIIVSVIFFTISLCM
LLSMRKKSKKKELYIDAQIPLKINLDYYTKDWNDEQL
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggatcttaaaggtaccttctgtgtggattacacaggatcagtgcttcagaaattaatc
tacatcattctgacgatactctgccacaacataaatagtcacctggccatagaactggaa
tataaagtgcaagagaatgaaagtgaaggagtttttattgggaacgtagccaaagatata
tttttgacatcagctactgcctgtgattcactagcttacaaactcatgaaagaaatggac
tatgtaatgctcaagcctgagagtggggagctatttacaaccaagcagagaatcgacaga
gaaatcttatgcccaatcaaattccgaggtgatccttgtgtccaacaagtcaatgtagtt
attctgtgtgctgatcagtatctgcaaatggtgaaggttaagatagtcatcctggatgtc
aatgataatgcaccgtattttgcagaacaagtgatgaaactctctattccagaagacgca
gctgcaggtacatcatttggaattgactattatgcaattgacaatgacactggagagaat
agcattaaacattattatcttgaaaatagccaaaatgttttcggtttgaacgatgatgaa
acgcccgccattgttgtccagcaaccattagacagggaggtgaaggacttgtatgaaatg
aaaatcgtggccgtggatggcggtgtaccccctttatctggaacagccacacttctgatc
aacattcaagacattaatgataactgccctgtttttaatgcatcagagtttgatattcag
attcctgaaaacatgtcctccaatagtgtggtgacacagctacatgctgtcgatgcagac
ctaggccctaatgcagaaatcacctattcttatggcaatcgtgttcaggatgtatccagg
aaactgtttatcttagatagtgacactgggcttatcatattttctggaaataaaagtcca
gagatacctcctatacataaacttacagtattggctaatggtccaggctgtgccccagct
atagttcaaattacagtgtctgtcatgcacaacagcaaatacagtccaaagttggagatc
agctatatagctaaccaggcagatggtgtgatttacctgaaggagactgcaccggaaaat
accccaattgctctcctcgaggtaactgacccagatcattatttaaaagggaccatctat
atcagcggcaatgtgcctttctatttaaaaccttatgaaaggtcaagaaataaacatctt
gtcgtcacatcacagcttttagaccatgagcttgaaaaccaatataagattgtaattaag
gcagaagatcctcgtagtcttcatgaactaacaatacatgttaagattattgatgaaaat
gacaactccccagaattctaccaaagctcctttgaggcttccattgaggaaaacaacaca
cctggagcttttttactgaagatctcagcaacagatgctgacagcggcaagaatggggaa
gtgacttatcacttgggacctgatgctttacccatcttttcaattgaacaactcacaggc
aatgtaacagtgtccactgccctggacagggaaaaagagaaactgtacaggttttctgtt
tctgctgttgaccatggaattcctcctagaaagaggagcactattgtaatcattcatgtc
ttggaccagaatgataacataccctccttcctcaccaatgactacacattctttattcca
gaaaacttcccacgacatggcgaaattggagtcatcaatgtaacggatttggatgaaggg
gctaatggtgatgttactgtgtccatcctgagtagtactagcaattttttaatggacaac
accagaggaatcttacgttgcaattcttcagtcgaccgagagaaaaatactatgcacgta
ttctgggttgaggcagtggatggtgggaaaccacctctttctgcaacagcaaaaataact
gtatttgttctagacataaatgataatcctccaactgtattacttcctcagtcaaacata
tcatggcttcttgtgccccctaacacaccccaaggaactgcagtggctgagatttatgcc
attgactatgatgctggtattaatgccgtcatgacttacactattgttgggaggaatggt
cctgctcctcatgtgtttggaattaatacagcgacaggaaacattacattgcaagagaaa
ctgttgagcaaagactatggcttgtatcaactactcgtaaaagtcagtgatcttggacag
ccccaacctctccattccacagtaatggtcaatttgtttgtcaatgagactgtgaccaat
aaaagttacttggaagacttgttgcacaggcgaactgttttcacagaagaagtgcaaact
gaaccaaatccatgtccattattacagacattagacatcccctgttcccctccaatcatt
cccattgcaatcacaatgattattgtctctgttattttctttactatttctctttgtatg
cttctaagcatgagaaagaaaagtaaaaaaaaagaactttacatagatgcccagatacca
ttaaaaataaatcttgactattatacaaaagactggaatgatgaacagttgtag
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