Chiloscyllium punctatum (brownbanded bambooshark): 140495969
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Entry
140495969 CDS
T11285
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140495969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpun03019
]
140495969
Messenger RNA biogenesis [BR:
cpun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
140495969
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
140495969
NCBI-ProteinID:
XP_072451422
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Position
25:58617857..58665938
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AA seq
531 aa
AA seq
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MATEMDSLSSAAESTAAPGGGGGLDADDDEENWLYGDENPGKQEEVALVDGGEDSLKSLQ
EPSQEFKVSNLEMAEAASQNGDEDDSDSDSDDDDVKVTIGNIKTGAPQYMGTPMNLNLKS
GRPYGSSAAKLHSRGIDLDAPGSINGIPVIEADLDLFEDKPWRKPGADLSDYFNYGFNEE
TWKAYCEKQRRLQLGLDPILASASESKKLVQQGKVSNIEKDLENNLPKMELKADFTSPPG
GRMKAGPPPNSFSSRKLAGAIDVISGYTGSIRRVEGRRRDKHGGDESAIQVLGDHGNKRP
PFPAPTGPPPPIPGPPPHFLHPPPPVSSGPPPMHPPGMPPPGPLPALFPPPVVPPPSLLM
PTIDGGPPPGYDNRPPPLFPYSTADSGLIGYPAISTTHTSWMNTVEKSTNSHWEYQGHRR
EREREHDRDRNRERDRGPTPTTSEYSSRERNYDRDYHRSRDRSRDREDRHRERRHKDKDD
SKHKSSRRKQHESEEGESHRRHKHKKNKRNKEDKEVGDEGAAETEGTETKD
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgaaatggattcgctgagctcggccgcggagagtacggcagcgcccggcggc
ggcggcggcctggacgccgacgatgatgaagagaactggctgtacggagatgaaaaccct
ggaaaacaagaggaggtggctttggttgatgggggtgaagattctttaaaatcgctgcag
gagccgtcacaagaattcaaagtcagcaatttggaaatggctgaggctgcttcgcaaaat
ggtgatgaggatgacagtgacagcgacagtgatgacgatgatgtgaaggtcactattggc
aacattaagacaggtgcaccacaatatatggggactccgatgaacttgaatctgaagagt
ggacggccttatggctcttctgcagcaaagttgcattcccgaggtattgacttagatgcc
cctgggagtatcaatgggattccagtgattgaggcagatttggatttgtttgaagacaaa
ccttggagaaaaccaggagctgatctttctgattattttaactatggcttcaatgaagag
acctggaaagcttattgtgagaaacaacgaagactccagttaggacttgatccaatactt
gcatctgcttcagagagcaaaaaattggttcagcaagggaaagtgagcaacatagagaag
gatctggaaaataatttacccaaaatggaattgaaagctgattttacatctcctcctggt
ggaaggatgaaagcaggcccaccgcctaatagtttttcctccagaaaacttgctggcgcg
attgacgttattagtggatacactggttccatcaggagggtagaaggaaggcgacgagac
aaacatggaggagatgagagtgcaattcaggttcttggagaccatggaaacaaaagacca
ccatttccagctcccacaggtcctcctcctccaatacctggaccaccccctcatttcttg
catccaccccctcctgtcagcagtggacctccacccatgcacccaccaggaatgccgcca
cctgggccccttccagcattatttccaccaccagttgtgccccctccatcattacttatg
ccaaccatagatggtggtccacctccaggctatgacaacaggccacctcctttattcccc
tatagtactgcagactctggactaattggttatcctgctatctctacaacacacacgtcc
tggatgaacacagttgagaaaagtaccaacagccactgggaataccaagggcatcggcga
gaaagagagcgagaacatgatcgagacagaaatcgtgagcgagatcgtggcccaacacca
acaacatctgaatacagtagcagagaacgtaactatgacagagattatcatcggagcaga
gatcgcagtagagaccgagaagatcgccaccgggaacggcggcacaaagacaaagatgat
tccaagcacaagtcctcaaggcgcaaacagcacgagagtgaggaaggagaaagtcacaga
cgtcacaaacacaagaaaaataaacgaaacaaagaggacaaagaagttggggatgaaggt
gctgcagagaccgagggaactgaaactaaagactaa
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