Chiloscyllium punctatum (brownbanded bambooshark): 140496008
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Entry
140496008 CDS
T11285
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpun04121
]
140496008 (rlim)
Enzymes [BR:
cpun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140496008 (rlim)
Ubiquitin system [BR:
cpun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140496008 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING-like
zf-RING_4
zf-HC5HC2H
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
140496008
NCBI-ProteinID:
XP_072451534
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All DBs
Position
25:64643537..64698990
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AA seq
663 aa
AA seq
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MENAANEDGGNDQADTQSSNEDQRRRQSDRLDREEAFYHFVNNLSEEEYRLMRDNNLFGT
PGEVTEEELSRRLQQVKDGVIQNNPDTRRSEGSGDNRGTEGSEEGSSGDSLLEWLNAFRQ
TGNTTRSGQSGNRSWRAVSRTNPTSGDFRFSLEINVSRSRIDQSAEMESEQPMDTSNVEA
TVPAAEEAVTPVPSGNTSAPSPTATQPSPPVTDPPMAMAEDDVQSEPERSASTGTRRSRG
PSGELSYENRYELLRHELETQAQHQGRPRSGRSRSPERRRSSRTRSNRSRSPLHQVSEGT
SRSRRQGLSQRSDRSVSESGTEGSSRTRQHVMSRQSRVGDGVQSEITNHVPVLEPNEPRE
TSQEAADSSEAVVSDPSVAGRRPPTIMLDLQVRRVRPGENADRDSIANRTRSRSQTSDNT
VVYESERGGLRRTFSRSERAGVRTYVSTIRIPFRRISDSGLGEAASVALQTILRRIMMGG
ELSSFVDSDSDSESSNRGQSQVQDVSESQDSINESPGMASEGRTGEQQAGEQRNGSETDS
ITGARRREGQQSRGLFGLEESGTLPILRLAHFFLLNDEDEDDQPRGLTKEQIDNLSTRNF
GESDAIKTCSVCISEYTAGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRQAVLVRTTGE
SVG
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgctgctaatgaagatggaggaaatgatcaggctgatactcagtcttctaac
gaagatcagcgcaggcgtcagtcagaccgcctggatcgggaggaagccttctatcatttt
gtcaataacctgagtgaagaggagtacaggctgatgagggataataacctgtttggtaca
ccaggggaagttacagaagaggaacttagcaggcgtttacagcaggtgaaggacggcgtt
attcagaacaaccctgatactcggagaagtgaaggctctggtgacaacagaggtactgag
ggttcagaagaaggatcaagtggagattctcttctcgagtggttgaatgcttttaggcaa
actgggaacacaacgagaagtggtcaaagtgggaatcgttcctggagagcagtcagtcgt
acaaacccaacaagtggtgattttagattcagcttggaaattaatgtcagtcggagtaga
attgaccaaagtgctgaaatggaaagtgagcaacctatggacacttcaaatgtggaagcg
acagtacctgcggcagaagaagcagtgacaccagtaccatccggaaatacaagtgcaccc
tcaccaacagcaacgcaaccatcaccacctgtaacagatccaccaatggctatggcagaa
gatgatgttcagagtgaacctgaaagatctgcttccactggaacaagacgaagtcgagga
ccaagtggagagctatcttatgaaaacagatatgaacttttgagacatgagcttgaaacc
caagctcaacatcaaggtcgcccaagaagtggtagaagtaggagtccagagcgccggagg
tcatctagaacgaggagcaatcgaagtcggtcacccttgcatcaagtcagtgaggggacg
agtagatcacgacgtcagggactttcccagaggtctgatagatctgtttcagaaagtgga
acagaaggaagttccagaactagacagcatgtcatgtccagacagagtcgggttggagat
ggggtgcagtctgaaataacaaatcatgttcctgttcttgagccaaatgaacctagagag
acttcccaggaagctgctgactcttcagaagccgtcgtcagtgatccctctgtagctggg
cgccgaccaccgaccattatgttagacctgcaagtgagaagggtgagacctggtgaaaat
gcagatagagatagcatagctaacaggacccggtcacgatcccaaacatccgacaacact
gttgtatatgaaagtgagcggggtggcctcaggcgcacattctcccgctctgaacgagca
ggggtgcgaacttatgtcagcaccattcgtattccttttcgcaggatatctgattcaggt
cttggagaggctgcctcagttgccctccaaacaatactacgccggataatgatgggtggg
gaactgagttcctttgtggacagtgacagcgattctgaatctagcaacaggggccaaagt
caagtgcaggatgtttctgaatcgcaagacagtataaatgaatccccaggcatggcttct
gaaggcagaacgggtgagcaacaggcaggggagcagcggaatggcagtgaaacagatagc
ataactggagctaggagaagagaaggtcagcaatctcgaggcttatttggtcttgaagaa
agtggtactttgcccatacttaggcttgctcatttctttctgctcaatgatgaagatgag
gacgatcagcccaggggactgactaaagagcagattgataacctgtccacgagaaatttt
ggagaaagtgatgcgattaaaacctgcagtgtgtgtattagtgaatacacagcaggaaac
aagctgcgcaagctaccctgctctcacgaatatcacgttcattgtatcgatcgctggctg
tccgaaaactccacatgtcccatttgccgtcaggctgttttagttcgcaccactggtgaa
agtgttggctag
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