Chiloscyllium punctatum (brownbanded bambooshark): 140496258
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Entry
140496258 CDS
T11285
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140496258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpun03021
]
140496258
03036 Chromosome and associated proteins [BR:
cpun03036
]
140496258
Transcription machinery [BR:
cpun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140496258
Coactivators
SAGA/TFTC/STAGA complex
140496258
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
140496258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
140496258
NCBI-ProteinID:
XP_072451891
LinkDB
All DBs
Position
26:complement(4609185..4958308)
Genome browser
AA seq
1141 aa
AA seq
DB search
MAAGPDPLEELFLSEVDEKAVSDLVGSLESQLAVLPGERRLTLAGDSVPQEGQRRAGRMA
PSPLGERPAAAAPPAAPSPGPGFGQKAAAGAGLSQRAASACELPPPPANSPPSSDPSAAG
ARASGAATPGTGRPSHSYRPPLPAPPSPSPSTSSPAPPLGTTEPEGRVLPLPLLTTGEPR
VSNHLPPAPPGTPPQAVNGVVAVCSSPAVTTTLHFSAGTASGTCSHLPKSGAFGSNVSSI
NTPCNSSQNGSQFVSVAQDSVLSTSTPTIALTRPPMHTVIASNVLGTALSQNGFAPHNHV
NLPGLVQFGEKTGIHQGAIVTQLANQTVAVSGPICSLSATNTDSSSQTKLVLHTQSQPVS
LSLLNNTAAPITVTNTPSNQLQYTVTSSLTGTSVPVSINAVAKPAVNIIAQPHVGITKVI
SSAPGIIQVSAAQSQPPHTGLGAPQRIVTPQLIIRSPQQPTVQLASGFTIPPGMILVRTD
SGQLVMVPQQALAQVQAQAQRPGSISPRPSAPTSVATIRLTTSQPAMTISSIRPGHPLQA
KVVQPAAKSVNTMSVAASQPVPTAAPTLVSGHTSTPQTVCTTTFSGVVSHHIITSQAQTQ
PQTPASSQSQSATKTQLQVHPQVTPSSLLPGTPTVTKVSMSSHSAPLGRAGQEMQENVKK
CKNFLATLIKLASHSGQPADTSRNVKSLVQDLLDSKIEPEEFTNRLQSELNSSPQPYLVP
FLKKSLPALRQSLVRNQQFILQVNQKSQGVALVQATSTVPSTGTVSTAVAGSSVRTQQPI
TDNTVSGTNIVTQAHINLAQQGRSTHLIIQPPVQTMKRQSGLGAQVRLPVVITPSITPVG
KTSLHQGSKGLAGSLLQVSADQKNKLSDPASGSFRDDDDINDVTSMAGVNLSEESANILA
TNSNLVGTHIRSCKDETFLASGALHRRVLETAKRYGITDVPIDIVNMISLATQERLKMVI
GKLTSIAQHRMETHKDHEWYEQATDVRTQLKFFEHLERLEKQRKDDQEREILLKAAKSRS
RQEDPEHARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKQDSPGLQATEVGMAA
GEVTRQGAGPTAGPQAGARSALSRQYTRQRVTRVNLRDFIFYMEQERDTRHSLVLYRALL
K
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcccggacccgctggaggagctgttcctgtcagaggtggacgagaaggcg
gtcagcgatctggtgggatcgttggaatcgcagctggcagtgctgcctggagagaggagg
ctaactctggcgggagacagcgtccctcaggagggacagcggcgagccggcaggatggcg
ccatcgccgctcggggagagaccggcggcggcggctccccctgcggccccttctcctggc
cctggcttcggacagaaggcagccgccggagctggtctcagtcagcgtgcagcctccgcc
tgcgagctcccgccacctcccgccaatagccccccttcctcggacccctcagcggccgga
gcccgggcttcgggtgcagcgaccccggggaccggccgcccctctcactcctaccggcca
ccgcttccagctcctccttccccatcccccagcaccagcagccctgcaccccctctgggt
accactgaacctgaggggagagtccttcccctgcccctcctaacaacaggcgagcctcgg
gtgtcgaaccaccttcccccagcacctcccggaaccccacctcaggctgtcaatggggtg
gtcgcagtctgcagctcccctgctgtgactactactttgcacttctccgctggtactgcc
tctgggacttgtagccatctccccaagtctggggcttttggatccaatgtcagtagcatc
aacacaccatgcaactcatctcaaaacggttctcaattcgtctctgtggctcaagacagc
gtcctgagtactagcacccccactattgcactcacaagaccgccaatgcatactgtgatt
gccagcaatgttttgggcactgcactatcacagaatggatttgccccccacaaccatgtg
aatctacctggattggtgcaatttggagaaaagacaggcatacatcagggggcaatagtg
acacaattggctaatcagactgttgctgtcagtggtccaatttgcagtctctcagccacc
aatacagactccagttcacagacaaagcttgttctgcacactcagtctcaacctgtttct
cttagtttattaaataacacagctgctccgatcacagtgaccaacactccgagcaatcag
ttgcaatacacggttaccagctctctcactggaaccagtgtgccagtcagcatcaatgca
gttgcaaaacctgcagtcaatataattgcacaacctcatgtcggaatcacaaaagtcatt
tcgtctgcccctggcatcatccaagtatcagctgctcagtcacagcctcctcatactggg
ttaggggcaccccaacgcattgtaactcctcagcttatcatccgttcaccacaacaacca
acagtgcagcttgcttctggtttcaccatcccaccaggaatgattttggtccggacagac
agcggccaacttgtcatggttcctcagcaagcattggctcaggttcaagcccaggcacaa
cgcccaggaagcatctctcccaggccttctgctccaacaagtgttgccacaattcgccta
acgacaagtcagccggccatgaccatctcctcaatcaggccaggacatccactgcaagcc
aaagtcgttcaacctgctgccaagtcagttaacacaatgtcggttgctgcttcacaacct
gtccctacagcagctcccactttggtttctggacataccagcactccacagactgtgtgc
acgacaaccttctctggagtggtcagccatcacatcatcacatctcaagcccaaactcaa
ccccagacccctgcttcatctcagtcccaatctgcaactaaaactcaactgcaagtccat
cctcaagtcacacccagttctctacttccaggaacacccacagttacaaaggtgtccatg
tcatcgcattctgcacctctgggaagagctggacaggaaatgcaggaaaatgtgaagaaa
tgcaagaactttctcgcaaccttgattaaactagcatcgcacagtggacagcctgcagac
acctcccggaatgtgaagagtcttgttcaagacttgctggactctaagattgaaccagaa
gagttcactaacagacttcagtcagaacttaactcatctccacagccatacctggtgcct
tttctcaagaaaagtttgccagccttgaggcagtccctggttcggaatcagcagttcatc
ctgcaagtaaatcagaaatcacaaggagtggccttagtccaggccacatctactgtgcca
tcgacaggaactgtcagcacagctgttgcgggatcatctgtacgaacacaacaacccatc
actgataacacagtctcgggaacaaatatagtgacacaggcacacatcaacttggctcag
caagggcgcagcacacatctgatcatacagcccccagtacagacaatgaaaaggcaatct
ggtctaggagctcaagtgagattgccggtggttattaccccatctatcacaccagtgggg
aagacgtcacttcaccaaggaagcaaaggtcttgcaggatcgttgctccaggtctctgcc
gatcagaaaaacaagctcagtgaccctgcaagtggctcttttagagacgatgatgacatc
aatgatgttacctcaatggctggagttaatctgagtgaggagagtgccaatattctagca
accaactccaatttagtaggaacgcacattcgctcctgtaaagatgaaacctttttggct
agcggtgctctgcacaggcgtgtcctagaaacagctaaaaggtatggaatcacggacgtt
cccattgacatagtaaacatgatttcactcgcaacgcaggaacggttaaaaatggtcatc
ggaaaactgacatcaatagcacaacacagaatggaaacgcacaaggaccatgaatggtac
gaacaagcaacagatgttcggacgcaactgaaattctttgaacatctggagcgactggaa
aaacaacggaaggatgatcaggagagagaaattctattaaaagcagcaaagagtcgctcc
aggcaagaggaccctgaacatgcgaggctaaagcagaaagcaaaggagatgcagcagcag
gagctggcacagatgagacaacgagatgcaaacttgacagcacttgctgccatcggccct
cgtaagaaacgcaaacaggattccccaggactgcaagcgactgaggtgggaatggcagct
ggcgaggtaaccagacagggtgcaggtcctacagcaggcccccaggccggagccagatca
gctttgtctcgccagtacacacgacagagggtaacgcgggtaaacctcagggacttcatc
ttctacatggaacaggaacgagacaccaggcactcacttgtactgtaccgagcactgctg
aagtag
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