Chiloscyllium punctatum (brownbanded bambooshark): 140496462
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Entry
140496462 CDS
T11285
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140496462 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpun04131
]
140496462 (vps35)
Membrane trafficking [BR:
cpun04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
140496462 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
140496462
NCBI-ProteinID:
XP_072452322
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Position
26:complement(41999594..42057173)
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQTVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYIK
SFSQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEESEEVVTGDINDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDGLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQSVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPERVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPIDTYNNILTVLKLKH
FHPLFEYFDYESRKNMSCYILSNALEYNTEIIGQEQVDAILNLVSTLIQDQPDQPAEDPD
PEDFAEEQSLVGRFIHLFQSEDPDQQYLILNSARKHFGAGGNQRIRFTLPPLVFSAYQLA
FCYKENSKVDEKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGDIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSICAHLFWSGRNTDKNGEEIHDGKRVMECLKKALKIANQCMDPSLQVQLF
TEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPEADGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaactcaacagtcaccgcaggatgagcaggaaaagcttcttgatgaagctgtt
cagactgttaaggtccagtctttccagatgaagcgatgcttggataagaataaattgatg
gatgcactaaaacatgcttcaaatatgcttggtgaattacgaacttcaatgctgtcacca
aagagttattatgagctctacatggccatttcagatgaattgcactatttggaagtttat
ctgactgatgagtttgcgaagggaagaaaggtggctgacctgtatgaacttgttcagtat
gcaggcaacatcattccaagactgtacttgctcatcactgttggagttgtctacattaag
tcgttttcccagtcaaggaaggatattcttaaagatctggtggaaatgtgtcgtggggtg
cagcatccattgcgagggctgttcctcaggaactatctacttcagtgtactagaaatatt
ttgccggatgaaggagaggagtctgaggaagttgtaactggagatatcaatgactctatg
gactttgtgctactgaactttgcagaaatgaacaaactctgggtgcgcatgcagcaccag
ggtcacagtagagaccgtgaaaagcgtgaacgtgaacgtcaggagctgcgaatcctagtt
ggtacaaacttagtccggcttagtcagttggaaggagttaatgtagagaggtacaaacag
attgtgttaactggaatattggagcaagtggtaaactgcagggatggtttggctcaggag
tatctcatggaatgtattattcaggtgtttcctgatgagtttcatctgcaaacgctgaat
ccattccttcgctcttgtgcagagctccatcaaagtgttaatgtcaaaaacatcataatt
gcattaattgatcggttggctttgtttgcgcatcgtgaagatggccctggaatccctgct
gatataaaactatttgatatcttttctcaacaagtagctacagttatacagtcaagacaa
gatatgccatctgaagatgtagtatctttgcaagtatcgctgatcaatttggccatgaag
tgttaccctgaaagggtggactatgttgataaagttcttgaaacaactgtagagatcttc
aacaagcttaatcttgaacatatcgctactagcagtgcagtttctaaagagttaactcgg
cttttaaagattcccattgacacctacaacaacatcctgactgtattgaagttgaaacac
ttccatcctttgtttgaatattttgactatgagtcacgcaaaaatatgagctgttatata
ctaagcaatgcgcttgagtacaacacagagataattggacaagaacaggttgatgcaata
ctaaacctggtgtcgacattaattcaggatcaaccagatcagccagcagaagatcctgac
cctgaagattttgctgaagaacaaagtctcgttggtagatttattcatttatttcaatct
gaagatcctgaccaacagtatctgatcttaaacagtgccagaaaacattttggtgctggt
ggcaatcaaaggattcgtttcactttgccgccattggttttttctgcctatcagctggcc
ttctgctacaaagagaattcaaaagtggatgaaaaatgggaaaagaaatgccagaagata
ttttcttttgcccaccagactatcagtgccctcattaaagcagagcttgcagagttgcct
ctccgtctatttctgcagggagcacttgcagctggggatattggatttgagaaccatgaa
actgtggcttatgagtttatgtcacaggcattttctctatatgaagatgaaatcagtgac
tccaaggcacagctagcagcaatcacattgataattgggacatttgaacgcatgaaatgc
ttcagtgaggagaaccacgagcctttgaggacacaatgtgcattggctgcttcaaagttg
cttaagaagccagatcagtgtcgtgctgttagcatctgtgctcatttattttggtctggg
cggaacactgataagaatggagaggagattcatgacggcaagcgagtgatggaatgtctt
aagaaggctttgaaaatagccaatcagtgcatggatccatcgctacaagtacagctcttc
actgaaatccttaatcgatacatttacttttacgaaaaagaaaatgaggcggtgactatt
caagttttaaatcagcttattcaaaaaataagggaagatctcccaaacttggaatccagt
gaagaaactgagcaaattaacaaacactttcacaacacactggagcatctgcgtctgagg
agagaatcacctgaagctgatggaccaatttatgaaggtcttgtcttgtag
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