Coniophora puteana: CONPUDRAFT_100195
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Entry
CONPUDRAFT_100195 CDS
T03134
Name
(RefSeq) ribosome biogenesis protein Sqt1
KO
K14818
ribosome assembly protein SQT1
Organism
cput
Coniophora puteana
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cput03009
]
CONPUDRAFT_100195
Ribosome biogenesis [BR:
cput03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
CONPUDRAFT_100195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_SPT8
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_like
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Beta-prop_LRRK2
Glyoxal_oxid_N
Motif
Other DBs
NCBI-GeneID:
19198213
NCBI-ProteinID:
XP_007766018
JGI:
Conpu1_100195
UniProt:
A0A5M3N042
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MATDHVDESEYVDEEEVFIDDGEVLQEVEDGEDHPMDEDDEADDVAELPSHDDADVTDTS
EQHFEGHDGSVFVVACHPTEPLAVSGGEDDLGYIWDITDGEVIVKLTGHSDSVSSAAFSA
DGQMVATGGMDGKVRVWRRVGTENFRTWEFLTELQGPDEVIWLRWHPRGNVLLAGSNDSM
VWLWQLPSGNTMQVFAGHTGPVQCGEFTPDGKRVVTACADGSLIMWDPRSPTAVFKLSPQ
DARFDTGGITSLAVNPSSTLAVVGGHDGSVRIINLTKGEIVGALGGHAEGDSVESIQFVN
LSGNDSGPGVVVTGGTDGKACIWDLSTMRQRATLQHQDAVTTLLTVPAPKSHLIISGSAD
RTLRTWDGRTGTLLKEHSGHHGPVLGASLGLRGEVVVSAGDDGLCLVYTTEKEEQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggccactgatcacgtcgatgaaagcgagtacgttgacgaagaggaagtatttatcgac
gatggagaggtcttgcaggaggtggaagacggcgaagatcatccgatggacgaagacgat
gaagccgatgatgtcgctgaactaccatctcacgacgatgccgatgttaccgacacttca
gaacaacacttcgaaggccatgatgggtcggtattcgtcgtggcttgccatccaacagag
cctctcgctgtctccggcggagaggatgatctgggatacatttgggatattacagacggc
gaagtcatcgtgaagctcacgggccactcggatagtgtcagcagcgctgcgttcagcgca
gacgggcaaatggtcgcgactggtggcatggacgggaaggtcagggtgtggagacgagtc
gggacagagaatttcaggacttgggagtttttgaccgagctacagggacctgacgaagtt
atatggctacggtggcatcctcgaggtaatgtactacttgcaggatcgaatgatagcatg
gtttggctgtggcaattgccgtcaggaaacactatgcaggtgttcgctgggcatactgga
ccagtgcagtgcggcgagttcactccagacggaaagcgagtggtcacggcttgtgcggac
ggatcgttgattatgtgggacccaagatcacctaccgccgtcttcaagctcagcccacaa
gatgcgcgattcgatacgggcggcatcacttcgcttgcagtgaatccttcgtcaaccctt
gccgtggttggtggccacgatggcagcgttcgtatcatcaacttgacaaaaggcgagatc
gtcggtgctctgggtggccatgccgaaggagacagtgtcgagtctatccaatttgtgaac
ctttctggcaacgatagcggtcctggggtcgtcgtcactggcgggacggatggtaaggcg
tgcatatgggatttgtcgaccatgcgccaaagagcgacattacagcatcaggatgcggtc
accactctccttaccgttccagcgccgaaaagccaccttatcatatctgggtcggctgac
agaacgctgcgcacttgggacggccggacgggcacactgttgaaggaacactctggtcac
cacggaccagtcctgggagccagtcttggtcttcggggtgaggtcgtcgtcagtgccggt
gatgatggtttgtgcttggtctacacgacggaaaaggaagaacagtag
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