Coniophora puteana: CONPUDRAFT_101375
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Entry
CONPUDRAFT_101375 CDS
T03134
Name
(RefSeq) insert subdomain of RNA polymerase alpha subunit
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
cput
Coniophora puteana
Pathway
cput03020
RNA polymerase
cput03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CONPUDRAFT_101375
09124 Replication and repair
03420 Nucleotide excision repair
CONPUDRAFT_101375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cput03021
]
CONPUDRAFT_101375
03400 DNA repair and recombination proteins [BR:
cput03400
]
CONPUDRAFT_101375
Transcription machinery [BR:
cput03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CONPUDRAFT_101375
DNA repair and recombination proteins [BR:
cput03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CONPUDRAFT_101375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_L_2
DUF22
Motif
Other DBs
NCBI-GeneID:
19198292
NCBI-ProteinID:
XP_007766843
JGI:
Conpu1_101375
UniProt:
A0A5M3MUW9
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MQGNEESEPILKIREVKKDSVNFTLENVDLALANSIRRVVMADIPTVAIDMVEVQANTTV
LPDEFIAHRLGMVPLVSTNCDEAMRLLRDCTCEEGCQFCSIELRLDISCHDNRTLEVTSN
HLEVVPFPFQDTAESLSGDELSKRSEDFGHPVGKNDPSAQPVLICKMRKGQELRIKCIAK
KGIAKEHAKWSPCSAVAFEYDPYNKLRHTTYWFEADERAEWPVSENAKEEDAPREDEVFD
YNAKPRKFYLEVETDGSLGPQEVMMKGLTELQTKLANLILGLKAPPDSDMFAAGDGAVNL
NGAGPSEQQGWGQGPWGGQVGSGGGASPSGAGGQWGSASGSGGSWGTGQGAWGNAGNTSP
SHNGVAGAGGWGSSSTTAGSNAWGGQTNPGDGTSGGAWGGQGGWSSPRATHSQTGWNI
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcaacgaagaaagcgagccaattctgaagatacgcgaggttaagaaggacagc
gtcaacttcacattggagaatgtagaccttgcactcgccaattccattcgacgcgtcgta
atggcagacattccgactgtagctatcgacatggtcgaagtgcaggccaacacgaccgtc
cttcctgacgagtttattgcccatcgcttgggaatggtaccactagtcagcacaaactgt
gatgaggctatgcgactactacgagactgcacatgcgaagaaggatgtcagttttgctcg
attgaactaagactcgacatctcttgtcatgataatcgcacgttggaggtcacaagcaat
catcttgaagtagttccatttccctttcaggataccgccgaatctctctctggtgacgag
ctttccaagcgcagtgaagactttggacatcccgtagggaaaaatgacccttctgcgcaa
ccagtgctgatttgcaagatgcgcaaaggacaagagctcagaataaaatgcattgcaaag
aagggtatagctaaagaacacgccaagtggtctccatgttctgccgtcgcgtttgagtac
gacccctataataaattacggcacaccacctattggttcgaggccgacgagcgggcggaa
tggcctgtcagcgagaacgccaaagaggaggacgcgcccagggaggacgaagtgtttgac
tataacgcaaagccccgaaagttctatctcgaagttgagacggacgggagtcttgggcca
caagaagtcatgatgaagggccttactgagctgcaaacaaagctggcgaacttaatcctg
ggtctcaaagccccgcctgattctgatatgtttgccgcaggcgatggtgcagtaaatctg
aacggagcgggtccatcagaacagcaaggctggggacagggaccctggggaggtcaggtc
ggttctggtgggggtgccagcccttcgggtgccggtggtcaatggggatcggcgagtgga
tccggcggaagctggggcactgggcagggagcatggggaaatgctggaaataccagtcca
tcacataatggcgtcgctggggccggtggctggggatccagctctacgacggcagggtca
aacgcatggggaggtcagaccaatcctggggatggcactagtggcggcgcatggggtggc
cagggtggatggagcagcccgcgtgcgacgcattcgcagaccggatggaacatatga
DBGET
integrated database retrieval system
