KEGG   Coniophora puteana: CONPUDRAFT_102793
Entry
CONPUDRAFT_102793 CDS       T03134                                 
Name
(RefSeq) DEAD-domain-containing protein
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
cput  Coniophora puteana
Pathway
cput03013  Nucleocytoplasmic transport
cput03015  mRNA surveillance pathway
cput03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cput00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CONPUDRAFT_102793
  09122 Translation
   03013 Nucleocytoplasmic transport
    CONPUDRAFT_102793
   03015 mRNA surveillance pathway
    CONPUDRAFT_102793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cput03019]
    CONPUDRAFT_102793
   03041 Spliceosome [BR:cput03041]
    CONPUDRAFT_102793
   03009 Ribosome biogenesis [BR:cput03009]
    CONPUDRAFT_102793
   03012 Translation factors [BR:cput03012]
    CONPUDRAFT_102793
Enzymes [BR:cput01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CONPUDRAFT_102793
Messenger RNA biogenesis [BR:cput03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CONPUDRAFT_102793
   mRNA cycle factors
    Stress granule specific factors
     CONPUDRAFT_102793
Spliceosome [BR:cput03041]
 Complex C
  Other components
   EJC/TREX
    CONPUDRAFT_102793
Ribosome biogenesis [BR:cput03009]
 Eukaryotic type
  90S particles
   Helicases
    CONPUDRAFT_102793
Translation factors [BR:cput03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    CONPUDRAFT_102793
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 TniB UvrD-helicase
Other DBs
NCBI-GeneID: 19198383
NCBI-ProteinID: XP_007767871
JGI: Conpu1_102793
UniProt: A0A5M3MU22
LinkDB
Position
Unknown
AA seq 396 aa
MAGINPGDEKLLFESSEAVSVVSTFDDLSLKEDLLRGIYAYNFEKPSAIQQRAILPITQG
RDVIAQAQSGTGKTATFSISILQSIDISVRETQALVLSPTRELATQIQSVVLALGDYMNV
QCHACIGGTSIGEDIRKLEYGQHVVSGTPGRVFDMIRRRALRTRHIKMLILDEADELLNK
GFKDQIYDVYRYLPPATQVVLLSATLPYDVLEMTTKFMTDPIRILVKRDELTLEGIKQFF
VAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTEKMRAANFTVSSMHGEMVQKE
RDAIMAEFRGGTSRVLITTDVWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKG
VAINFVTVDDVRILRDIEQFYSTQIDEMPVNAAELI
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggccggcataaacccaggagacgaaaaacttctcttcgagtcgtcggaggctgtgtct
gttgtctcgacgttcgatgacctcagtctcaaggaagacttgcttcggggtatatacgcg
tacaacttcgaaaaaccttcggccattcagcaacgagcaatcctcccgatcacacaaggg
cgcgatgtaattgcccaagcccaatcaggtaccggtaaaacggccaccttctccatttcc
atcctccagtccatcgacatctcggttcgcgaaactcaggctctcgttctgtcgcctact
cgcgagctcgctactcaaatccagtctgttgttcttgccctgggtgactacatgaacgtc
cagtgtcatgcgtgcattggtggaacctctatcggcgaggacattcgaaaacttgaatac
ggccaacatgtcgtatccggtaccccaggacgtgtctttgacatgattcggagacgcgcc
cttcgtactcggcacattaaaatgctcattctcgatgaagccgacgagctgctcaacaag
ggcttcaaggaccagatttacgacgtatatcgctatctccccccggccactcaggtcgtt
cttctcagtgccaccctcccatacgatgtgctcgagatgactactaagttcatgaccgac
cccatacgcattctagtcaagcgtgacgagctgacgcttgaaggcatcaagcagttcttc
gtggcggtggagaaggaggattggaaattcgacaccttgtgcgatctctacgacacgttg
acgatcacgcaggccgtcatcttctgcaatactcgacgcaaggttgactggttaactgag
aagatgcgcgctgcaaacttcactgtctcatcaatgcatggtgagatggttcaaaaggaa
agggacgcgatcatggcggaatttagaggtggaacctcacgggtactcatcacgaccgat
gtctgggcgcgtggcatcgacgttcagcaggtttcactagtcataaattacgacctaccc
gcgaaccgtgaaaactatattcatcgcatcggtcggtccggccggttcggtcggaaaggt
gtcgccataaacttcgtcacagtggacgatgtccgaattcttcgcgatatcgaacaattt
tacagcacacaaattgatgaaatgccggtcaacgctgctgagcttatctaa

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