Coniophora puteana: CONPUDRAFT_106979
Help
Entry
CONPUDRAFT_106979 CDS
T03134
Name
(RefSeq) RNP containing family member
KO
K12876
RNA-binding protein 8A
Organism
cput
Coniophora puteana
Pathway
cput03013
Nucleocytoplasmic transport
cput03015
mRNA surveillance pathway
cput03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CONPUDRAFT_106979
09122 Translation
03013 Nucleocytoplasmic transport
CONPUDRAFT_106979
03015 mRNA surveillance pathway
CONPUDRAFT_106979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cput03019
]
CONPUDRAFT_106979
03041 Spliceosome [BR:
cput03041
]
CONPUDRAFT_106979
Messenger RNA biogenesis [BR:
cput03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CONPUDRAFT_106979
Spliceosome [BR:
cput03041
]
Complex C
Other components
EJC/TREX
CONPUDRAFT_106979
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
19198623
NCBI-ProteinID:
XP_007770721
JGI:
Conpu1_106979
UniProt:
A0A5M3MIA7
LinkDB
All DBs
Position
Unknown
AA seq
169 aa
AA seq
DB search
MSDDEMNIDEVAAGGAVRRRGRGFQNTGGNDSTVTAEHTYDRVETSHVKDDTRAARSVEG
WIVLVTNVHEEATEEDVTDKFAEFGEIKNLHLNLDRRTGYVKGYALVEYETMAEAQAAIE
GASNTPLLEQAIQCDYAFVRPPPTGPKKGRGGREGRGRSASPSRRRGGE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgatgaaatgaacatcgatgaagtcgctgccggcggtgccgtccgccgtaga
ggccgcggcttccagaacaccggcgggaacgacagcaccgtcactgccgagcacacgtac
gaccgggttgagacctcgcatgtgaaggatgatacgcgggccgcacgctccgtcgagggc
tggattgtcttggtgactaatgtgcatgaggaggcgaccgaagaggacgtcaccgacaag
ttcgcagaattcggagagattaagaacctgcacctgaacctagaccgtcggacgggctat
gtcaagggatatgcgcttgtcgaatatgaaactatggctgaggcacaggccgccatcgaa
ggcgcgtctaacacgccgcttctggagcaagcgatccagtgcgactatgcgttcgttcga
ccgccacccacgggccctaagaagggcagaggaggccgagagggccgaggcaggagcgcg
agtccgtcgcgtcggaggggaggggagtga
DBGET
integrated database retrieval system
