KEGG   Coniophora puteana: CONPUDRAFT_108178
Entry
CONPUDRAFT_108178 CDS       T03134                                 
Name
(RefSeq) Sm-like ribonucleo protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
cput  Coniophora puteana
Pathway
cput03018  RNA degradation
cput03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cput00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CONPUDRAFT_108178
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CONPUDRAFT_108178
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cput03019]
    CONPUDRAFT_108178
   03041 Spliceosome [BR:cput03041]
    CONPUDRAFT_108178
Messenger RNA biogenesis [BR:cput03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CONPUDRAFT_108178
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CONPUDRAFT_108178
Spliceosome [BR:cput03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    CONPUDRAFT_108178
SSDB
Motif
Pfam: LSM DUF7510
Other DBs
NCBI-GeneID: 19198693
NCBI-ProteinID: XP_007771389
JGI: Conpu1_108178
UniProt: A0A5M3MH53
LinkDB
Position
Unknown
AA seq 95 aa
MSSLQGYVDHRVLLVLQDGRSIVGVLAGFDQKANVVLSDSKERVYSLEEGVEEIPLGLYL
VKGDMIVLIGEIDDAVDSSVDLSTIRAEPIPPIRY
NT seq 288 nt   +upstreamnt  +downstreamnt
atgtccagcttgcagggatatgtcgatcaccgcgtactcctcgtcctccaagatggccgc
tccattgtaggagtcctggctggttttgatcaaaaagcgaatgtagtcctttctgactcg
aaagaacgcgtgtacagtcttgaggagggcgtagaagagataccattgggcctctacctg
gtgaaaggtgacatgatcgtccttattggcgagatcgatgatgcagtagactcatctgtc
gacctctcgactatccgtgccgagcccattccaccaatccggtactga

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