Coniophora puteana: CONPUDRAFT_108567
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Entry
CONPUDRAFT_108567 CDS
T03134
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
cput
Coniophora puteana
Pathway
cput03013
Nucleocytoplasmic transport
cput03015
mRNA surveillance pathway
cput03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CONPUDRAFT_108567
09122 Translation
03013 Nucleocytoplasmic transport
CONPUDRAFT_108567
03015 mRNA surveillance pathway
CONPUDRAFT_108567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cput03019
]
CONPUDRAFT_108567
03041 Spliceosome [BR:
cput03041
]
CONPUDRAFT_108567
Messenger RNA biogenesis [BR:
cput03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CONPUDRAFT_108567
TREX complex
CONPUDRAFT_108567
Spliceosome [BR:
cput03041
]
Complex C
Other components
EJC/TREX
CONPUDRAFT_108567
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CONPUDRAFT_108567
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
19198716
NCBI-ProteinID:
XP_007771613
JGI:
Conpu1_108567
UniProt:
A0A5M3MHA4
LinkDB
All DBs
Position
Unknown
AA seq
239 aa
AA seq
DB search
MAPARNSKPYARPRRSDGVWSHDRAALSSGPAARTAGSEPSMKLIVSNLHYEITPKNLMS
IFGQIGTLVCEPQIRYDRSGRSSGVAIVTYETIGEATRAKNQFQGLLAKGQPMEIASHVD
APRRTRSASMPGVSTASLLNRIEKPSLVDRLNPTDNKKQQQGAGPVRNARGGGRGPRGGG
KTRAARPSKSKPKTAEDLDKELDVFMGDDKASSVGATAGTSVGDPAEKPVGSTEDVAMA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcacccgctagaaacagcaagccctacgcccgacctcgccgctccgatggtgtatgg
agtcacgacagagcggcgctctcgagtgggcctgccgcccgcacagctggttccgagccc
tcgatgaaactcatagtgtccaacctgcactacgaaatcactcctaagaacttgatgtcc
atcttcgggcagattggcacgctcgtctgcgagcctcaaatcaggtatgaccgcagcgga
cgctcctcgggcgtggctatcgtcacgtacgaaacaatcggagaggcaacgcgggccaag
aaccagttccagggtcttctcgcaaagggtcagccgatggagatagcttctcatgttgat
gcacctcgtcggacgcgctctgcaagcatgcctggcgtctcgacggcgtcgctgctcaat
cgtattgagaagccgtctctcgtcgacagacttaatcctacggacaataaaaagcaacag
caaggtgctggtccggtgaggaatgcccgtggcggcggccgtggaccacgtggtggaggc
aagaccagagctgccaggccgtccaagagcaagccgaagacggcagaggaccttgacaag
gagttggacgtattcatgggcgatgacaaagccagctctgtgggtgcgacggcgggcacc
agtgtcggtgatccggccgagaagcctgttggtagcacagaagacgtagcgatggcttag
DBGET
integrated database retrieval system