KEGG   Coniophora puteana: CONPUDRAFT_108567
Entry
CONPUDRAFT_108567 CDS       T03134                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
cput  Coniophora puteana
Pathway
cput03013  Nucleocytoplasmic transport
cput03015  mRNA surveillance pathway
cput03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cput00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CONPUDRAFT_108567
  09122 Translation
   03013 Nucleocytoplasmic transport
    CONPUDRAFT_108567
   03015 mRNA surveillance pathway
    CONPUDRAFT_108567
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cput03019]
    CONPUDRAFT_108567
   03041 Spliceosome [BR:cput03041]
    CONPUDRAFT_108567
Messenger RNA biogenesis [BR:cput03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CONPUDRAFT_108567
    TREX complex
     CONPUDRAFT_108567
Spliceosome [BR:cput03041]
 Complex C
  Other components
   EJC/TREX
    CONPUDRAFT_108567
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CONPUDRAFT_108567
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 19198716
NCBI-ProteinID: XP_007771613
JGI: Conpu1_108567
UniProt: A0A5M3MHA4
LinkDB
Position
Unknown
AA seq 239 aa
MAPARNSKPYARPRRSDGVWSHDRAALSSGPAARTAGSEPSMKLIVSNLHYEITPKNLMS
IFGQIGTLVCEPQIRYDRSGRSSGVAIVTYETIGEATRAKNQFQGLLAKGQPMEIASHVD
APRRTRSASMPGVSTASLLNRIEKPSLVDRLNPTDNKKQQQGAGPVRNARGGGRGPRGGG
KTRAARPSKSKPKTAEDLDKELDVFMGDDKASSVGATAGTSVGDPAEKPVGSTEDVAMA
NT seq 720 nt   +upstreamnt  +downstreamnt
atggcacccgctagaaacagcaagccctacgcccgacctcgccgctccgatggtgtatgg
agtcacgacagagcggcgctctcgagtgggcctgccgcccgcacagctggttccgagccc
tcgatgaaactcatagtgtccaacctgcactacgaaatcactcctaagaacttgatgtcc
atcttcgggcagattggcacgctcgtctgcgagcctcaaatcaggtatgaccgcagcgga
cgctcctcgggcgtggctatcgtcacgtacgaaacaatcggagaggcaacgcgggccaag
aaccagttccagggtcttctcgcaaagggtcagccgatggagatagcttctcatgttgat
gcacctcgtcggacgcgctctgcaagcatgcctggcgtctcgacggcgtcgctgctcaat
cgtattgagaagccgtctctcgtcgacagacttaatcctacggacaataaaaagcaacag
caaggtgctggtccggtgaggaatgcccgtggcggcggccgtggaccacgtggtggaggc
aagaccagagctgccaggccgtccaagagcaagccgaagacggcagaggaccttgacaag
gagttggacgtattcatgggcgatgacaaagccagctctgtgggtgcgacggcgggcacc
agtgtcggtgatccggccgagaagcctgttggtagcacagaagacgtagcgatggcttag

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