KEGG   Coniophora puteana: CONPUDRAFT_111266
Entry
CONPUDRAFT_111266 CDS       T03134                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K12880  THO complex subunit 3
Organism
cput  Coniophora puteana
Pathway
cput03013  Nucleocytoplasmic transport
cput03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cput00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CONPUDRAFT_111266
  09122 Translation
   03013 Nucleocytoplasmic transport
    CONPUDRAFT_111266
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cput03019]
    CONPUDRAFT_111266
   03041 Spliceosome [BR:cput03041]
    CONPUDRAFT_111266
Messenger RNA biogenesis [BR:cput03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     CONPUDRAFT_111266
Spliceosome [BR:cput03041]
 Complex C
  Other components
   EJC/TREX
    CONPUDRAFT_111266
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CONPUDRAFT_111266
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_1st WD40_Gbeta Beta-prop_Aladin Beta-prop_WDR3_2nd EIF3I ANAPC4_WD40 Beta-prop_TEP1_2nd CFAP251_N Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N PD40 Beta-prop_RIG_2nd Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 19198879
NCBI-ProteinID: XP_007773588
JGI: Conpu1_111266
UniProt: A0A5M3MBT9
LinkDB
Position
Unknown
AA seq 354 aa
MASYTGSKDEDEVPPPQRPPSPPAHTTFAARGLHAINFSLHKPRDVRIPSQQAMTHVAWS
CDGKRLAGVGIDKIVRVWTPEKSLEYRSSATFSGGHSDDVDYVTWNPTHPELFCTSSQKD
RRIVFWDARQSRHIQQVPLKVAPVQLNYSPDGRSLLYTSAGHQLFFMSNVQEVGSSKRHW
QTSDKDGNIVATTAMFNFAGDGVVLTHHSEHSLRILDYPSLTLRENPAAHVGGCVAVALD
PRGRYLASGGNDSIVDLFDVNEWICARTITSCEYGVNALSFSYDGEYIAIASGGQYIDIC
ATETGVPLHRVPTLAPSPTVTWHPSKFVFAYCGQTKLREGGPPSTAVISMFGAL
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggcaagttacacgggcagcaaggacgaagatgaagtcccgccccctcaacggccaccc
tccccaccagcccacactaccttcgctgctcgaggcctgcatgccatcaacttctccctc
cacaagcctcgggacgttcgcatcccttcacagcaagccatgacccatgtcgcatggagc
tgcgacggaaaacgcctcgccggagtaggcatagacaagatagtgcgcgtgtggacaccg
gaaaaaagcctggaatatcgctcctcagcgaccttctccggcggccattccgacgacgtc
gactatgtgacctggaaccccacccatccggaactattttgcacctcgagccagaaggat
cgacgcatagtgttctgggatgcccggcaaagtcggcacatacagcaagtcccgctgaaa
gttgcgcccgttcaactgaactactcccctgatggtcgatcgctgctttatacctcggct
gggcatcagttgttctttatgtcaaatgtgcaggaggtgggatcgtcgaagaggcattgg
caaacgtctgacaaggatgggaacatcgtagcgacgacggctatgttcaactttgcaggc
gacggagttgtcctcacgcaccattccgaacattcccttcgcattctagattatccttct
ttaacgcttcgggagaaccctgcagcccatgtaggcgggtgtgtagcagtggcgcttgat
ccgcgcggaagataccttgcttcgggaggcaatgactctatagtagacttgttcgatgtt
aatgagtggatatgcgctcgaaccataacttcctgcgagtacggggttaatgcactgagc
ttctcctacgacggagagtacatcgctattgcaagcggtgggcaatacatcgacatctgt
gcgaccgagactggggtcccgcttcatcgagtccccacccttgcgccatcgccaacggtg
acttggcatccttcgaagtttgtttttgcatactgtggtcagacgaagttgagggagggt
ggtccaccttccaccgcagtgattagtatgttcggagcactgtag

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