Coniophora puteana: CONPUDRAFT_114196
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Entry
CONPUDRAFT_114196 CDS
T03134
Name
(RefSeq) Cullin-4B
KO
K10609
cullin 4
Organism
cput
Coniophora puteana
Pathway
cput03420
Nucleotide excision repair
cput04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CONPUDRAFT_114196
09124 Replication and repair
03420 Nucleotide excision repair
CONPUDRAFT_114196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cput04121
]
CONPUDRAFT_114196
03400 DNA repair and recombination proteins [BR:
cput03400
]
CONPUDRAFT_114196
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cput04147
]
CONPUDRAFT_114196
Ubiquitin system [BR:
cput04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
CONPUDRAFT_114196
DNA repair and recombination proteins [BR:
cput03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
CONPUDRAFT_114196
TCR (transcription coupled repair) factors
Cul4-CSA complex
CONPUDRAFT_114196
Exosome [BR:
cput04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CONPUDRAFT_114196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
DUF515
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
19199059
NCBI-ProteinID:
XP_007763015
JGI:
Conpu1_114196
UniProt:
A0A5M3N458
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MDVESLLTLPKTSNAFSALRSTVLVDRDLDAGSASSYPRKTPRLDADSDSGSASRSRNRI
SITGKGVDRTGPVRIQVIGFNGSDPSIEKDYNNLFALLRSATRYILTKGESVPATYEKLY
TACCTTVGPAARGESLYTAVSQELEQGIGRIATSLINEPREGIEWISAFVEWCDWFKIQI
TLLQSIFTYLDRVYVIKSGKLGLRETAFDMFKSRICDDIRLMDRMRISIRQWLIWERNNR
EPHNQREHFISLVTHLVSHNQYHDLFETYYIKCTQEYFADESKRKVEEEKVTAQVFITHC
TTRKEEEEKRADAVLLEYTKPSVVSTTHHALLQGRLAWLAKDVVGPFMDEKDSNRLKRAY
QLFAHVDGLPKLCAEYKRYLQNKVKAIVTDTARDDEMVERLLDLKEFSDKTMRSSFAPDA
SVPESASGPTQDFSYAAIDAFAQGFKARHNKPAELIAKHLDRLMRKGQRGMSDSDFSDML
DAALGLYRFTDDKDVFRAFYHRALAKRLLLERSASDDFEKAMLKKLKERYDPEFDMGDQM
FQDLTISRDTLREFHNRHLDSESLCRQLSVMVLQRSAWPFTSRKHDIVLPPNMQADLSVY
HRFYKSKHQNHRLDWDHALGTATLKARFRKGSKDLSVSLYQAIVLLLFNDEDELGFKTIK
EQTRLDDMELRRTLQSLACGTKRVLKKNPAGREVNDDDMFSFNADFEDPRSRVHINSIQA
KETAEESKRTQSNVEGDRKLSIDAAIVRIMKAKKELQFEQLKTQTIDAVKNHFVPDVPTI
KQRIEGLVEQEYLRRDEDDMSKLFYIS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggagagcctgctcacgcttcccaagacttcaaatgcattctcagccctccgg
tcgactgtattggtcgaccgggatttagacgcggggtcggcatcatcttatccgcgcaag
acaccgcgcttggacgccgactctgactctggttctgcttctaggtctcgcaatcgcatt
tctatcacaggcaagggtgtggataggactggtcctgttcgcatacaggtcattggcttc
aatggcagtgacccgtcaatcgagaaggactacaacaacctgttcgcgttactcagaagt
gcgacacgttacattctcaccaaaggcgaaagtgtgcccgcgacgtacgagaagctctat
accgcttgctgcaccacagtcggacctgcagcaaggggtgaaagcctgtacacggcagtc
agccaggagctcgaacagggcatcgggagaatcgcgaccagccttatcaacgaaccgcgg
gaagggatagaatggatcagcgcattcgtggagtggtgtgactggttcaagatacaaatt
acgttgttgcaatcaatctttacctacctggatcgtgtctatgtgattaagtcgggcaag
cttggattacgcgagacggcttttgacatgttcaagagccgcatctgtgatgatatcaga
ttaatggataggatgcgcattagtattcgacaatggttgatatgggagagaaataaccgt
gagccccacaaccaacgagagcacttcatctctctcgtcacacacctcgtctctcacaat
cagtatcacgacctatttgagacgtattacatcaagtgcacgcaagagtacttcgcagat
gagtcaaagaggaaggtggaggaagaaaaggtcactgcccaggtgttcatcacccactgc
acaacgcgcaaggaggaagaagagaaacgcgcggacgctgttctcttggagtatacgaag
ccgagtgtggtcagtacgacgcatcatgcgttattgcagggcaggctcgcctggctcgct
aaagatgttgtcggaccgttcatggatgaaaaagactccaacaggttaaaaagggcatac
caactgttcgcgcacgtcgatgggctacccaagctttgcgcagagtacaagaggtacctc
cagaacaaagtcaaggccatcgtcaccgacacagcccgtgacgacgaaatggttgagcgc
ctgctggaccttaaagaattctccgacaagactatgcgcagctcctttgctcctgacgcc
tctgtgcccgagtccgcttccggtccgactcaggacttctcgtacgcggcgatcgacgca
ttcgctcagggcttcaaggcgcgacataacaagcccgcggagctgattgcgaagcacctg
gataggctcatgcgcaagggccagcgcggcatgtccgatagtgacttcagcgacatgctg
gatgctgcgctgggactgtacaggtttacggacgacaaggacgtgtttagggcgttctac
caccgggctttggcgaagagactgttgcttgagaggagcgcgagtgatgatttcgaaaag
gcgatgttgaaaaagctgaaagaacgatacgatcctgagttcgacatgggcgaccagatg
ttccaagacttgaccatctcacgcgacacgctcagggagttccataatcgtcacttggac
tcggagtcgctgtgcaggcagctgtcggtcatggtgcttcaacgtagcgcgtggccgttt
acgtcgcgcaagcacgacatcgttttgccaccgaatatgcaagcagatttatcggtgtac
caccgcttctacaagtccaagcaccagaaccaccggctcgattgggaccacgcgctcggg
actgcgaccctcaaggcacgcttccgcaaagggtcgaaggacttgagcgtcagcttatat
caggccatcgtcttactcttgttcaacgatgaggatgaacttgggttcaagacgatcaag
gagcagacgaggcttgacgatatggagctacgacgcaccctgcagagtcttgcatgcgga
accaagagggtgctcaagaagaatcccgcaggacgggaagtgaacgatgacgacatgttc
tccttcaacgcggacttcgaggaccctcgttcgcgtgtgcacattaactcgatccaagcc
aaggaaaccgcggaggagtcgaagcgcacacaatccaacgtcgaaggcgaccgaaagctc
tccatcgatgcagcgattgtgcgtatcatgaaggcgaagaaggagctgcaattcgaacag
ctcaagacgcagaccatcgatgctgtcaagaaccactttgtccccgatgtgcctactatc
aagcagcgcatcgaagggctagtcgagcaggagtacctaaggcgggatgaggatgacatg
agcaagctgttttatatttcttag
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integrated database retrieval system
