Coniophora puteana: CONPUDRAFT_115261
Help
Entry
CONPUDRAFT_115261 CDS
T03134
Name
(RefSeq) Sm-like ribonucleo protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cput
Coniophora puteana
Pathway
cput03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CONPUDRAFT_115261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cput03019
]
CONPUDRAFT_115261
Messenger RNA biogenesis [BR:
cput03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CONPUDRAFT_115261
mRNA degradation factors
5'-3' decay
Lsm complex
CONPUDRAFT_115261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
19199139
NCBI-ProteinID:
XP_007763406
JGI:
Conpu1_115261
UniProt:
A0A5M3N5J0
LinkDB
All DBs
Position
Unknown
AA seq
136 aa
AA seq
DB search
MDSLIPFTTSGSLVDCVDRKMLVILRDGRKLHGVLRSYDQFANLVLEDTVERIYHGNAFA
EHWHGLFLIRGENVVLLGEVDLDQEDDVPLRQVDYQVLDPYHRNDIAQKKLHDEAKAKIL
YEQRGFCKEGGEGDGY
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atggactcgttaataccattcacaacgtccggatcacttgtggattgcgtggacagaaag
atgctcgtcattcttcgcgatggtcgaaaactacatggggtccttcgttcttatgatcag
tttgccaacttagtgcttgaggatactgtcgagcgaatatatcatggcaatgctttcgcg
gagcattggcatggcctgttcttgattcgcggggaaaatgttgttctgctaggagaagtt
gatttggatcaagaagacgacgttccgttgagacaagtggattatcaagtacttgacccg
taccataggaatgacatagctcagaagaagcttcatgacgaggctaaagccaaaatattg
tacgagcaaaggggcttttgtaaggaagggggggaaggagatggctattga
DBGET
integrated database retrieval system