KEGG   Coniophora puteana: CONPUDRAFT_115261
Entry
CONPUDRAFT_115261 CDS       T03134                                 
Name
(RefSeq) Sm-like ribonucleo protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
cput  Coniophora puteana
Pathway
cput03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cput00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CONPUDRAFT_115261
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cput03019]
    CONPUDRAFT_115261
Messenger RNA biogenesis [BR:cput03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CONPUDRAFT_115261
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CONPUDRAFT_115261
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 19199139
NCBI-ProteinID: XP_007763406
JGI: Conpu1_115261
UniProt: A0A5M3N5J0
LinkDB
Position
Unknown
AA seq 136 aa
MDSLIPFTTSGSLVDCVDRKMLVILRDGRKLHGVLRSYDQFANLVLEDTVERIYHGNAFA
EHWHGLFLIRGENVVLLGEVDLDQEDDVPLRQVDYQVLDPYHRNDIAQKKLHDEAKAKIL
YEQRGFCKEGGEGDGY
NT seq 411 nt   +upstreamnt  +downstreamnt
atggactcgttaataccattcacaacgtccggatcacttgtggattgcgtggacagaaag
atgctcgtcattcttcgcgatggtcgaaaactacatggggtccttcgttcttatgatcag
tttgccaacttagtgcttgaggatactgtcgagcgaatatatcatggcaatgctttcgcg
gagcattggcatggcctgttcttgattcgcggggaaaatgttgttctgctaggagaagtt
gatttggatcaagaagacgacgttccgttgagacaagtggattatcaagtacttgacccg
taccataggaatgacatagctcagaagaagcttcatgacgaggctaaagccaaaatattg
tacgagcaaaggggcttttgtaaggaagggggggaaggagatggctattga

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