KEGG   Coniophora puteana: CONPUDRAFT_116112
Entry
CONPUDRAFT_116112 CDS       T03134                                 
Name
(RefSeq) RNA polymerase Rpb6
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
cput  Coniophora puteana
Pathway
cput03020  RNA polymerase
cput03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cput00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CONPUDRAFT_116112
  09124 Replication and repair
   03420 Nucleotide excision repair
    CONPUDRAFT_116112
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cput03021]
    CONPUDRAFT_116112
   03400 DNA repair and recombination proteins [BR:cput03400]
    CONPUDRAFT_116112
Transcription machinery [BR:cput03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CONPUDRAFT_116112
  RNA polymerase III system
   RNA polymerase III
     CONPUDRAFT_116112
  RNA polymerase I system
   RNA polymerase I
     CONPUDRAFT_116112
DNA repair and recombination proteins [BR:cput03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CONPUDRAFT_116112
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 19199211
NCBI-ProteinID: XP_007763675
JGI: Conpu1_116112
UniProt: A0A5M3N6X7
LinkDB
Position
Unknown
AA seq 113 aa
MNGVNGMDHDQEMANGEAAQPEQSAVPTSGERQANKERITTPYLTKYERARILGTRALQI
SMNAPVLVPLDGETDALQIAIKELSQRKIPLIIRRYLPDGSFEDWSVSELISD
NT seq 342 nt   +upstreamnt  +downstreamnt
atgaatggcgtaaacggcatggaccatgaccaggagatggccaatggagaggctgctcag
ccagaacaatcggccgtacctacgagcggcgaacggcaggccaacaaagagcgcatcacg
acaccttacttgaccaagtacgagcgtgcacgaatattgggtaccagagccttgcaaatc
agcatgaacgctccggtactcgtcccgctcgatggtgagacggatgctttacaaatagca
ataaaagaactttctcaacgaaaaataccacttatcatccgacggtacttgccagacggc
agcttcgaagattggagtgtttccgagctcattagtgactag

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