Coniophora puteana: CONPUDRAFT_118472
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Entry
CONPUDRAFT_118472 CDS
T03134
Name
(RefSeq) WD40 repeat-like protein
KO
K15542
polyadenylation factor subunit 2
Organism
cput
Coniophora puteana
Pathway
cput03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CONPUDRAFT_118472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cput03019
]
CONPUDRAFT_118472
Messenger RNA biogenesis [BR:
cput03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CONPUDRAFT_118472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
EIF3I
Beta-prop_EML
Beta-prop_Aladin
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
NBCH_WD40
PROPPIN
Beta-prop_HPS5
eIF2A
PEP5_VPS11_N
WD40_RFWD3
Beta-prop_DCAF4
Ge1_WD40
Tricorn_2nd
Beta-prop_NUP159_NUP214
Beta-prop_RIG_1st
B-prop_COPA_B_2nd
Beta-prop_WDR11_2nd
WD_LRWD1
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_ELP1_1st
Beta-prop_NOL10_N
Beta-prop_WDR75_2nd
Det1
Motif
Other DBs
NCBI-GeneID:
19199391
NCBI-ProteinID:
XP_007765012
JGI:
Conpu1_118472
UniProt:
A0A5M3N2F4
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MTSNVPLLLPPSALAPSTPKDCAEWVPTQHLSEPQPPPVDDVRIMEMELAAARQLADGKT
VKKTRPRRTVDFNGTMGKWIKLRKTRPTSSYVPYIRPAPPYIIDLLPPSAYPNNVSTSIC
TKFVHTSTNKLRCPVNVVTWTPEARRILTGSTSGEFTLWNGLTFNFETILQAHDTAIRAM
KFTNSGAFLASADQSGVIKYFQPNMNNLTAWNGHREAIRGLSFSPDDGRFATASDDSTIR
IWSFEESREERVMTGHGWDVKCVEWHPTKGLLVSGSKDNLIKFWDPRTGTVLSTLHQHKN
TIQALAWSPNGNLVASASRDQTVRVFDIRAMKEFRVLKGHKKEVCSVTWHPVHPVLVSGG
SEGSILHWDLSQPEPSTIQPALPPRATLAQAHDSNVWTLAFHPLGHILASGSNDYTTRFW
ARERPGDASSVFAGGGEKPPEADAGGQDDEDDMMVPGFSFGAGAGGNGFGSAGPGGGGQG
QGWWKQEDQGGNPLLGPSSDGYVHRASFAGDAMDSDDFIPGLGGGGGGGASGGGGGGGFG
GGMDAGPSEPPPQSASYASQNDSYGRGGRQDDRDRGDRGDRGGGRFGASGWQNRRGRRGR
Y
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgaacgtccccttactgcttcctccgagtgcgctcgctccttccacacccaag
gactgtgcagaatgggttccaacacaacatctttctgagcctcagcctccgcccgttgac
gatgtacgaataatggagatggagttggcagcagcccggcagcttgcggatgggaagacg
gtaaagaagacgcggcctcggcggacagtagactttaatgggacaatgggaaagtggata
aagctgcgcaaaacgcgtccaacctcaagctacgtgccgtacattcggcctgcgcctcca
tacattatcgacctccttcctccatctgcataccctaacaacgtctctacatccatatgc
accaaattcgtccacacctccaccaacaaacttcgctgtccagtcaatgtagtaacctgg
acaccagaagcccgccgcatcctaacgggttcgacgagcggcgaattcactctctggaac
ggcctcaccttcaacttcgagaccatcctgcaggcgcacgacaccgccatccgcgcgatg
aagttcactaactcgggcgccttcctcgcttccgcggaccagagcggcgtcatcaagtac
ttccagccgaacatgaacaacctgactgcgtggaacggacaccgcgaggccattcggggg
ctgagttttagcccggacgatgggaggttcgcaacggcgagtgatgattcgacgatacgg
atttggtcgtttgaggaaagcagggaggagcgggttatgacaggtcacggttgggacgtc
aaatgcgttgagtggcatccgacaaagggtctcctcgtttcggggagtaaagacaacctc
atcaagttctgggatcctcggacggggactgtcctctctacgctccatcaacacaagaat
acgatccaagccctcgcgtggtcacccaacggcaatctggtcgcaagtgcttctcgtgat
cagaccgtccgcgtctttgatatccgtgcgatgaaggagttcagggtactcaaaggccac
aagaaggaagtctgctccgtaacatggcaccccgtccaccccgtcctcgtctccggtggc
tccgaaggctccatcctgcactgggacctctcccagcccgagccctcgaccatccagccc
gccctgccgccccgcgcgaccctcgcgcaggcacacgactccaacgtctggacgctcgcg
ttccacccgctcgggcacatcctcgcgagcgggtccaacgactacacgacgcgcttctgg
gcgcgcgagcgccccggagacgcgtcctcggtgttcgcgggcggaggcgagaagccgccc
gaggcggacgcgggcgggcaggacgacgaggacgatatgatggtgcctgggttcagcttc
ggtgcgggtgcgggcggcaacgggttcgggtctgcgggtccgggtggaggcgggcagggg
caggggtggtggaagcaggaggaccagggcgggaatccgctgctaggtccgtcgtcggat
gggtatgtgcatcgggcgtcgttcgcgggcgatgcgatggactcggacgatttcattcct
gggcttggcggtgggggcggcggaggcgcgagtggaggtggaggtggaggtggcttcggt
gggggcatggatgccgggcctagcgagccaccgccacaatcggcatcttacgcttcgcaa
aacgactcgtatggtcggggaggcaggcaggatgaccgggacagaggcgacagaggcgac
agaggcggaggaagattcggagctagtggatggcaaaaccggagaggtcgtcgtggtaga
tactga
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