KEGG   Coniophora puteana: CONPUDRAFT_118472
Entry
CONPUDRAFT_118472 CDS       T03134                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K15542  polyadenylation factor subunit 2
Organism
cput  Coniophora puteana
Pathway
cput03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cput00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CONPUDRAFT_118472
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cput03019]
    CONPUDRAFT_118472
Messenger RNA biogenesis [BR:cput03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     CONPUDRAFT_118472
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st EIF3I Beta-prop_EML Beta-prop_Aladin ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C NBCH_WD40 PROPPIN Beta-prop_HPS5 eIF2A PEP5_VPS11_N WD40_RFWD3 Beta-prop_DCAF4 Ge1_WD40 Tricorn_2nd Beta-prop_NUP159_NUP214 Beta-prop_RIG_1st B-prop_COPA_B_2nd Beta-prop_WDR11_2nd WD_LRWD1 Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_ELP1_1st Beta-prop_NOL10_N Beta-prop_WDR75_2nd Det1
Other DBs
NCBI-GeneID: 19199391
NCBI-ProteinID: XP_007765012
JGI: Conpu1_118472
UniProt: A0A5M3N2F4
LinkDB
Position
Unknown
AA seq 601 aa
MTSNVPLLLPPSALAPSTPKDCAEWVPTQHLSEPQPPPVDDVRIMEMELAAARQLADGKT
VKKTRPRRTVDFNGTMGKWIKLRKTRPTSSYVPYIRPAPPYIIDLLPPSAYPNNVSTSIC
TKFVHTSTNKLRCPVNVVTWTPEARRILTGSTSGEFTLWNGLTFNFETILQAHDTAIRAM
KFTNSGAFLASADQSGVIKYFQPNMNNLTAWNGHREAIRGLSFSPDDGRFATASDDSTIR
IWSFEESREERVMTGHGWDVKCVEWHPTKGLLVSGSKDNLIKFWDPRTGTVLSTLHQHKN
TIQALAWSPNGNLVASASRDQTVRVFDIRAMKEFRVLKGHKKEVCSVTWHPVHPVLVSGG
SEGSILHWDLSQPEPSTIQPALPPRATLAQAHDSNVWTLAFHPLGHILASGSNDYTTRFW
ARERPGDASSVFAGGGEKPPEADAGGQDDEDDMMVPGFSFGAGAGGNGFGSAGPGGGGQG
QGWWKQEDQGGNPLLGPSSDGYVHRASFAGDAMDSDDFIPGLGGGGGGGASGGGGGGGFG
GGMDAGPSEPPPQSASYASQNDSYGRGGRQDDRDRGDRGDRGGGRFGASGWQNRRGRRGR
Y
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgacatcgaacgtccccttactgcttcctccgagtgcgctcgctccttccacacccaag
gactgtgcagaatgggttccaacacaacatctttctgagcctcagcctccgcccgttgac
gatgtacgaataatggagatggagttggcagcagcccggcagcttgcggatgggaagacg
gtaaagaagacgcggcctcggcggacagtagactttaatgggacaatgggaaagtggata
aagctgcgcaaaacgcgtccaacctcaagctacgtgccgtacattcggcctgcgcctcca
tacattatcgacctccttcctccatctgcataccctaacaacgtctctacatccatatgc
accaaattcgtccacacctccaccaacaaacttcgctgtccagtcaatgtagtaacctgg
acaccagaagcccgccgcatcctaacgggttcgacgagcggcgaattcactctctggaac
ggcctcaccttcaacttcgagaccatcctgcaggcgcacgacaccgccatccgcgcgatg
aagttcactaactcgggcgccttcctcgcttccgcggaccagagcggcgtcatcaagtac
ttccagccgaacatgaacaacctgactgcgtggaacggacaccgcgaggccattcggggg
ctgagttttagcccggacgatgggaggttcgcaacggcgagtgatgattcgacgatacgg
atttggtcgtttgaggaaagcagggaggagcgggttatgacaggtcacggttgggacgtc
aaatgcgttgagtggcatccgacaaagggtctcctcgtttcggggagtaaagacaacctc
atcaagttctgggatcctcggacggggactgtcctctctacgctccatcaacacaagaat
acgatccaagccctcgcgtggtcacccaacggcaatctggtcgcaagtgcttctcgtgat
cagaccgtccgcgtctttgatatccgtgcgatgaaggagttcagggtactcaaaggccac
aagaaggaagtctgctccgtaacatggcaccccgtccaccccgtcctcgtctccggtggc
tccgaaggctccatcctgcactgggacctctcccagcccgagccctcgaccatccagccc
gccctgccgccccgcgcgaccctcgcgcaggcacacgactccaacgtctggacgctcgcg
ttccacccgctcgggcacatcctcgcgagcgggtccaacgactacacgacgcgcttctgg
gcgcgcgagcgccccggagacgcgtcctcggtgttcgcgggcggaggcgagaagccgccc
gaggcggacgcgggcgggcaggacgacgaggacgatatgatggtgcctgggttcagcttc
ggtgcgggtgcgggcggcaacgggttcgggtctgcgggtccgggtggaggcgggcagggg
caggggtggtggaagcaggaggaccagggcgggaatccgctgctaggtccgtcgtcggat
gggtatgtgcatcgggcgtcgttcgcgggcgatgcgatggactcggacgatttcattcct
gggcttggcggtgggggcggcggaggcgcgagtggaggtggaggtggaggtggcttcggt
gggggcatggatgccgggcctagcgagccaccgccacaatcggcatcttacgcttcgcaa
aacgactcgtatggtcggggaggcaggcaggatgaccgggacagaggcgacagaggcgac
agaggcggaggaagattcggagctagtggatggcaaaaccggagaggtcgtcgtggtaga
tactga

DBGET integrated database retrieval system