Coniophora puteana: CONPUDRAFT_122503
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Entry
CONPUDRAFT_122503 CDS
T03134
Name
(RefSeq) histone deacetylase RPD3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cput
Coniophora puteana
Pathway
cput03082
ATP-dependent chromatin remodeling
cput03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CONPUDRAFT_122503
03083 Polycomb repressive complex
CONPUDRAFT_122503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cput03036
]
CONPUDRAFT_122503
Enzymes [BR:
cput01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CONPUDRAFT_122503
Chromosome and associated proteins [BR:
cput03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
CONPUDRAFT_122503
HDAC complexes
Sin3A-HDAC complex
CONPUDRAFT_122503
BRAF-HDAC complex
CONPUDRAFT_122503
REST complex
CONPUDRAFT_122503
SHIP complex
CONPUDRAFT_122503
MiDAC complex
CONPUDRAFT_122503
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
CONPUDRAFT_122503
Heterochromatin formation proteins
Other heterochromatin formation proteins
CONPUDRAFT_122503
Chromatin remodeling factors
NuRD complex
CONPUDRAFT_122503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
19199700
NCBI-ProteinID:
XP_007767851
JGI:
Conpu1_122503
UniProt:
A0A5M3MSG7
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MSKKRISYYYDPEVGSYTYGLGHLMKPHRIRMAHELITAYGMLEKMSVLRAKRASAESMT
AFHTDEYIHFLSRVTPETADELTYNGTRFLLGDDNPPFDGVFEYSSISAGGSLAAARRIQ
DGAADIAINWAGGLHHAKKREASGFCYINDIVLCILELLRTYARVLYIDVDCHHGDGVEE
AFYTTDRVMTCSLHKFGEFFPGTGTLDDKGYGKGKGYSVNVPLKDGIRDDSYKSVFEPVI
GKILEVFRPSAVVLQLGADSLAGDKLGCFNLTMHGHANCVTFLRNAGLPLVLLGGGGYTT
KNVARAWTYETGVALNMEQELDDNLPWCSHFEWYGPRYKLEVQANNMDDINVKDGSLDRV
RISALQQLSELGSRNAPSVGMHDVPRQSVGSHLGLGDYDVDVESDGDMDDLDRKLAQHAR
YVYRLQESDANQNSDESDEDSDTSYSSRRKRMSILTNRYFDASAERDPCGQNPSRRKFFK
SRAHWDPTFGQVTVNDRSLFATDKSLSTTMENGGSTSGYADAMDEDQD
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaagagaatatcctactactatgaccccgaagtcgggtcatatacctacggc
cttggccatctcatgaaaccacatcggatacgcatggcccatgagctcataaccgcctat
ggcatgctcgaaaagatgagcgtattgcgtgcaaaacgcgcttctgcagagtccatgacc
gcctttcacaccgacgagtacatccacttcctcagcagagtcaccccggaaaccgcggac
gagctcacctataacgggacaagattcctccttggggatgataatccaccgtttgatgga
gtcttcgaatacagctctatatctgctggaggctcactagccgctgcgagacggatacag
gacggtgctgcagatatcgccataaattgggcaggtggtcttcaccatgccaagaagcga
gaggcatccggcttctgttacatcaacgacattgtgctctgcatcctcgagctgctgagg
acgtacgcccgcgtgctgtacatcgacgtcgactgccaccacggggatggcgtggaagag
gcgttttacaccacggatagggtgatgacctgctcgctgcacaagtttggagagttcttc
cccgggacaggtacgctggacgacaaggggtatggtaaaggaaagggttactcagtgaat
gtgcctctgaaggatggtatacgggatgattcgtacaagagcgtgtttgagccggtcata
ggcaaaatcctggaagtcttcagaccatccgcggttgtcttgcaattaggcgcggattcg
ctcgcgggcgacaagctcggatgctttaacctcactatgcacggtcacgcgaattgcgtc
accttcctacgcaacgcgggcctgccgctcgttctgctcggcgggggcgggtacacgacg
aaaaacgtggcgcgcgcgtggacgtacgagacgggcgtcgcgctgaacatggagcaggag
ctggacgacaatctgccgtggtgctcgcactttgagtggtacggcccgcggtacaagctc
gaggtgcaggcgaacaatatggacgatatcaacgtcaaggatggctcgctcgaccgggtg
aggatatcggcgctgcagcagctgagcgagctagggtcgaggaacgcgccgtcggttggg
atgcatgacgtgccgagacagagcgtcgggagtcatctgggcttgggtgactacgatgtg
gatgtcgagtcggacggtgatatggacgacttggacaggaagttggcgcagcatgcgcgg
tacgtgtacaggctacaagagtcggacgcgaaccagaactcggacgagtcggacgaggac
tcggacacatcttacagctcgcggcggaaacgcatgagcatcctgactaaccggtacttt
gacgcgagtgctgaacgggacccatgtgggcaaaacccgtcgcggcgcaagttcttcaag
agtcgggcacactgggaccccactttcgggcaggtgactgtgaacgaccggtcattgttt
gcgacagacaagtcgttgtcaactacgatggagaatggaggatcgacgtcgggctatgcg
gatgccatggacgaggatcaggattga
DBGET
integrated database retrieval system
