Coniophora puteana: CONPUDRAFT_122562
Help
Entry
CONPUDRAFT_122562 CDS
T03134
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cput
Coniophora puteana
Pathway
cput03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CONPUDRAFT_122562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cput03021
]
CONPUDRAFT_122562
Enzymes [BR:
cput01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CONPUDRAFT_122562
Transcription machinery [BR:
cput03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
CONPUDRAFT_122562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
19199704
NCBI-ProteinID:
XP_007767868
JGI:
Conpu1_122562
UniProt:
A0A5M3MSQ8
LinkDB
All DBs
Position
Unknown
AA seq
1699 aa
AA seq
DB search
MNIAHSIPSTVSSVSFSFLTSQDIRRISVKQIVNPVLLDDLNRPNIGGLYDPALGPSERQ
DICATCRLSYFTCPGHFGHIELPLPVFHPLFMVNAYNILRATCLFCHKFKLPRTVLCKYA
AKLRLLEHGLLEAAHGIDDIRLIQRKEKGDDAEDDGGSDETAQEFEMRVNLYVSIYLSRA
SSSRRDHYKDGLVYQARKDIISDFMRTAMIRQCKNCGAHGFTFRKEGHTKVIEYDLTPKQ
KSQHAYSGLKRPRVLDLAPVPNHSDINHMDVDSASSESEGEGEPILSEDNDEPPNVAKPS
EDHQARAVNGKIKGKRGRNERLMPPEECRAHIRRLFKNESTLCSLLYGRHGPFAPLTPTG
LSLASADMFFMEVVPVPPTRFRPPVRMGETLFEHQQNELLSKVLNSSYRVRDANANVRAK
DATKDQSRAEEYLWDSVVQMQIDVNSFIDSNKNPAPVRQGKLPPAGVKQGLEKKEGLFRK
HMMGKRVNYAARSVISPDVNIEPNEIGIPPVFARKLTYPEPVTPINFHELRQYVIAGPKN
YPGATMVEYEDGHQQSLENMTIEQRTAIANQLLTPYNGSDNRRGLATKTASVNKKVYRHL
LNGDILILNRQPTLHKPSMMCHKARILRGEKTIRMHYANCNSYNADFDGDEMNIHFPQNQ
VARAEAMLIANTDNQYLVPTSGKPLRGLIQDHVVAGVWMTCQDAFFTREEYFQLLYGALR
PEDQIDQVGRLKTLPPTIWKPAPRWTGKQIISTVLKNITPTNAEGLNLESKAKVPGNLWG
KGSTEDNVIFVDGDLVSGVLDKSAFGATDYGLVHSVYELYGADVAGKLLGILSRLFTKFL
QHRAFTCRMDDLALTPDADKRRSDILDDACNFGTDAAIENFPSLVGLDKEDVPQALASLL
RDILRDDNKMAGLDVTVRNKMGGLTKSVEDACVPGGLLRKFPYNHMQMMTLSGAKGSAVN
ARQISCGLGQQELEGRRVPLMVSGKSLPSFKALETKAIAGGYVASRFLTGIKPQEFYFHC
MAGREGLIDTAVKTSRSGYLQRCLIKHLEGLRVHYDHTVRGSDMSIYQFHYGGDGLDVTK
QKHLYQFGFVAQNEKSFVNRLQPAEVAQAINEEDAIAYMKKVLKKSAEREDKHTPAPREV
YDPALNKFTPSRYLGSTSEKFASALDSYTKTNPHNLLRSKKLHHPLPIKKRKDNMSVNHF
KMLMNVKYMRSLADPGEAVGLLASQGVGEPSTQMTLNTFHFAGHGAANVTLGIPRLREIV
MTASQKPKTPSMTMEARADTSQGEVSAFCKQANRMTLAQVVEKITVRERLTASGDAHRTE
FIVDMEFFPEEEYRSEYDVEPSEILAVFSSKFPLFLKKEIQNEIKKIDADLKSQIAELGK
GKVSKDLPVDGGDAEDEAAPPSRGRDDDERSEEGDGDAEDEKRARQRKQQATYDSDEDED
PTELDEDAIEAAFATASNDDEERAEIPKLSKSLKERIKVVSDLFQHNLIFATSFDFTTKK
CTFKLEFTAEFPKLLLVGVVERTCHKSIIREIPGIADCFSSAKDNDQKGKKKIQVTTNGS
NLQGMWLFNDQDVIVNDTIYSNDIYAILKTYGVEMARAAILREIGGVFSAYKIDVDMRHL
ELIADYMTFEGGYKPFNRSGLSSNPSPLLKASYETTAAFLSDATLYGDFDDLSTPSGNIV
MGRPNRTGTGVFDVVMPIA
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgcccactcgataccttccactgtatcaagcgtctctttctcattcctcact
agccaggatattcgccgcatctctgtcaaacagatcgtcaatcctgttctcctcgatgat
ctgaatagacctaatatcggaggcctctacgatcctgctctgggaccgagcgagcgtcag
gacatctgcgcaacatgtcgcctcagctacttcacttgtcctggccacttcggccatatt
gaactcccgctcccagtattccatccgcttttcatggtaaacgcgtacaacatcctcaga
gccacttgcttgttctgtcataaattcaagctgccacgtacagttctatgtaaatatgct
gctaaactgcgactgcttgaacatggcctactcgaagctgcacatggcatcgatgacatc
cgtctcatacagcgcaaggagaaaggcgatgatgctgaagatgatggtggctcggatgag
acagcgcaggagtttgaaatgcgtgtcaacctatacgtttcgatatacctatctcgtgca
tctagcagcaggcgagatcactacaaggatggcctcgtttaccaggcccgcaaggacatt
atttcggacttcatgcgcacagctatgattcggcaatgtaaaaactgtggagcccatggc
ttcacctttcgaaaggagggtcacacaaaggtcatcgagtacgaccttactccgaaacag
aaaagtcaacacgcttactctggcttaaaacggcctcgcgtgcttgatttggctccagtc
ccgaaccattcagacataaaccatatggatgtggactctgccagctctgaatcagaaggg
gagggcgagccgattctttctgaggacaatgacgaacctcccaatgttgctaaaccctcg
gaagaccaccaagctcgcgcagtcaacggtaaaatcaaagggaagcgtgggcgaaacgag
cgactcatgcctccagaagaatgccgggctcacatacgtcgtctattcaaaaacgaatcg
acattgtgttcccttctgtatgggcgacacggcccatttgccccgctcacgcccacaggt
ctgtcgcttgcctccgcagacatgttcttcatggaggtcgtccctgtgccacccacacgc
ttcagaccaccagtaaggatgggtgaaacgctctttgagcaccagcagaacgagcttctc
tcaaaagtgctgaacagctcttaccgtgtacgcgatgccaatgccaatgtcagggcgaaa
gatgcaacaaaagaccagtcaagagctgaagagtatctatgggactcggtggttcagatg
caaattgacgtcaatagcttcattgacagtaataagaatcctgctcccgtacgacagggg
aagctgcctcctgcaggtgtgaagcaagggcttgaaaagaaggaaggcctgttccgaaag
cacatgatgggtaaacgtgtcaactacgcagcgcgttcagtcatttcccccgacgtcaac
atcgagccaaacgagattggtattccaccagtgtttgctcggaaattaacataccctgaa
cccgtcactcctatcaacttccatgagctgcggcaatatgtgattgccggtcctaaaaac
tatcccggagcaacgatggtggagtatgaagatgggcatcagcaatctctggagaacatg
actattgagcagcgcacagcaatagcaaatcagctgttgacaccttacaacggtagcgac
aatcgtcgtggccttgcgaccaaaaccgcgtctgtcaacaagaaggtgtatcgacatcta
ctcaacggcgacatcttgatcttgaaccgacagccaacactgcacaaacctagtatgatg
tgccataaagctcgcatattacgtggcgagaagaccattcgaatgcactatgctaactgt
aactcttataatgctgattttgatggagatgaaatgaacattcacttccctcagaatcaa
gtagctcgcgctgaggcgatgctcattgccaataccgacaatcagtacttggtgccaacc
tctggaaagcctttgcgtggtctcattcaagatcatgttgtagctggcgtttggatgaca
tgtcaagatgccttcttcactcgagaagagtacttccagctactctatggcgccttgagg
cctgaagaccagatagaccaagtggggaggctgaaaacactaccaccaacaatatggaag
ccggcacctcgttggacgggcaaacaaatcatctccactgtcctgaaaaacatcactccg
accaatgctgaaggtctaaaccttgaatctaaggccaaggttccaggcaatctgtggggc
aaaggttcgacggaagataacgtcatcttcgttgacggagaccttgtctctggagtcctt
gacaaatcggcatttggtgcaacggactacggccttgtccactctgtctatgagctgtat
ggggccgatgttgctggtaaattgctagggatccttagtaggctcttcacaaagttcctc
cagcaccgagcttttacttgccgcatggacgacctcgctttgacccctgatgcagacaaa
cgaaggtccgatatcttggatgatgcatgcaactttggcaccgatgctgctatcgagaac
tttccttcactggttggtctagacaaagaggacgtccctcaggcgctagcttcgctactg
cgagacatcctccgggacgataacaaaatggctggtcttgatgtcactgtacgaaacaag
atgggagggctcacgaagtctgtcgaagatgcttgcgtccctggaggtcttctacggaag
ttcccctacaaccacatgcagatgatgacactgtctggtgccaaaggcagtgctgtaaac
gcacgacaaatctcgtgtggtctgggccagcaagagctagaaggtcgtcgtgtacctctc
atggtcagcggcaaatcactaccctcattcaaagctctggagaccaaagctattgctggt
ggatatgttgcaagccgtttcttgacggggatcaaacctcaagaattctactttcattgc
atggctggtcgtgaaggtctgattgatacagctgtcaagacttcacgttccgggtacctt
cagcgttgcttgatcaagcatttggaaggactccgcgtccattatgaccatactgtccgc
ggtagcgacatgtcgatctatcaattccattacggtggagacggcctcgatgtcaccaaa
cagaaacacttgtatcaattcggcttcgtggcccagaacgaaaaatctttcgtcaatcgt
ctacagcctgcggaggttgctcaggccatcaatgaggaagatgctattgcgtacatgaaa
aaggttctcaagaagtctgctgagcgcgaggacaagcatacgcctgcgccgcgagaggtt
tacgatccagccctgaacaagttcacaccaagtcgctacctgggtagtacttcggaaaag
tttgctagcgcactggacagctacactaaaactaatcctcacaacctactccggtccaag
aagcttcaccatcctcttcccatcaaaaagcggaaggacaacatgtctgtgaatcacttc
aaaatgctaatgaatgtaaagtatatgcgaagtctggctgaccctggggaagcggttggt
ttactggcatcgcaaggagttggcgagccatcaacccagatgactttgaatactttccac
tttgccggccacggtgctgccaacgttacgctcggaattcctcgactgcgagaaatcgtc
atgacggcttcgcagaaacccaagacaccctctatgaccatggaagctcgtgcagatacg
tctcagggcgaggtttcagccttctgcaagcaggctaatcgcatgaccctcgctcaagtc
gttgagaagattactgtacgagagcggctaaccgccagcggagatgctcaccgcacggag
ttcatcgtcgacatggaattctttcccgaggaggagtatcgaagcgaatatgacgtcgag
ccatcagagatcttggccgtgtttagctccaaattcccccttttcctgaagaaggagatt
caaaatgaaatcaagaagattgacgctgatctgaagagccaaattgctgagcttggcaaa
gggaaagtgtcgaaagaccttccggtggacgggggagatgctgaagatgaggctgcacct
ccgagtcggggtcgagatgatgacgaaaggagtgaagagggagatggtgatgcggaggac
gagaagcgggcgaggcagcggaagcagcaagctacttacgattcggacgaggacgaggac
ccaaccgagcttgacgaagatgcaatcgaggcggcgtttgccactgcgtctaacgatgat
gaagagcgggctgaaattccgaagctcagcaagtcactcaaagagaggatcaaggttgtt
tcggacttattccagcacaacctcatctttgccacatcatttgattttactacaaagaag
tgtacattcaagttggagttcactgcagagttcccaaaattactgctggttggcgtggtg
gaacgcacttgtcacaagtccatcattcgggagattccaggcatcgccgactgcttcagt
tcggcaaaggacaacgatcaaaagggtaaaaagaagattcaggtcactacgaatggttct
aatcttcagggaatgtggctctttaacgaccaagacgtcattgtcaatgatactatctac
tccaatgacatttacgccatcctgaagacgtacggtgtggagatggctcgcgcggctatc
ctccgggaaattggaggggtgtttagtgcttacaaaattgatgtagacatgagacatcta
gagttgattgcggattatatgactttcgaaggcgggtacaagcctttcaatcggagcgga
ttgtctagcaacccttccccactcctcaaggcatcttacgagacaaccgctgcattcctg
tctgatgccacgctgtatggcgacttcgatgatctctcgactccatccgggaacatcgtc
atgggccgtccgaatagaacggggacgggtgtgtttgatgtcgtcatgcccatcgcatga
DBGET
integrated database retrieval system
