Coniophora puteana: CONPUDRAFT_127213
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Entry
CONPUDRAFT_127213 CDS
T03134
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
cput
Coniophora puteana
Pathway
cput03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cput00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CONPUDRAFT_127213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cput03021
]
CONPUDRAFT_127213
03019 Messenger RNA biogenesis [BR:
cput03019
]
CONPUDRAFT_127213
Transcription machinery [BR:
cput03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CONPUDRAFT_127213
Messenger RNA biogenesis [BR:
cput03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CONPUDRAFT_127213
U7-dependent histone pre-mRNA processing factors
CONPUDRAFT_127213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
19200044
NCBI-ProteinID:
XP_007770932
JGI:
Conpu1_127213
UniProt:
A0A5M3MJM8
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MAATADPLQMLAAALNVPADSDEQATLLAALRESLEAHPNPIPILCSTLVRTVSGAADSL
LKRWVLELLHFGISRSSLALDVRTNLATTSVQTLAAMLNDPAPRIAKLVVSILTGVYPLV
FRQMFTIRSQRQEWDIVLQCKSRILEFVWSPTTPSGVKLAAVKFMQKIILLQTRGNPDPR
LQNRDDPNISSIPADHPILSSQTLEQEANKLLEGLVTLLYTSPNPDIISAILNSWSNLVK
LRPTYVQLVVSSLASWTPNTLSGLSASAIKSVEKGIRILLVHISRGPHGSAFGAQISEAL
SVQGTRMERASAEEKARKAAASATATEAAKKRPPSASVEAPSDVKRVRMEAGPSTSNSNS
AAFLAGFDFNTLPIALIIEIIVANLAAFSEPTLTDLVNAYRQRQGTPTVPTASTPVPAVP
PIAPRAHDKGKAAEITPPPVKQEPVDPLKMDIDEEEMEYEPDKLNQELGTAAAGEDAGAE
ETAEADISLTLEDFRLPPPTDLPEDERIVLMRKSITRISDGADELKIGLDDSSVKMETSA
VDMWMLLVIRMFSRVSHPHSESSGRDEEAGKRPQDQDVITANYTRQDKIRQSLCDYIMED
FAGRRARFIVDILLLRLATFWMNEEWYNDRINRNGDLNRPPNYDSWLNQIVSTYQTILDT
KADGRPDSKDKAFARFLLDLPAVPPDVFELLRDLSVETDKMHVGFTSLREFVVERPSLRS
ESLQVLLELTTHPEPVTRRAAINTVKRWIPGNDFIEGKVRGFALRILRRLQKRPAKDDRK
GGETHVNGASEDQPMEDGQLAADDIEQTPYLPEEMELPAQKAHVLQHVELLFALSVKVPD
FLDEIFEAYGHMDSSTQEVIQNLITPLVKSLGSSNGKLLTLMRTCPAGSESLALRVLAIF
TESGRPSAQLVALVKGLISERDLDARFLIPIIAEMDKSDILRYLPRIVSILNGEAEPKNL
VRSVFNSVVTTPPQTFGSVTSNLPRVRQSELLTPAELMVLLHESEKEIGLKAAIEAINIC
FAMTDVFRSEILAVVMQQIVDEPVLPVLFLRTVIQAVTTYKSLVGFVSTTLLSRLITKKI
WQNPHLWEGFIRCAKAIAPASFGALLQLPKEQLRELVDKQPSLKSGLRDYVTKKAGNKAR
VAGFLDIFGEDDSAQNQTQDTTMVAAPA
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggccgccactgcagacccgctccagatgctggccgccgctctgaacgtgcctgcagac
tcggacgagcaggccaccctcctagccgcgctgcgcgagtcactcgaggcccacccgaat
cccatacccatcctctgctcgacgcttgttagaaccgtgtccggtgcagctgactccctt
ttgaaaagatgggttctcgagctattacactttggcatatctcgctcgagtctcgcgctc
gacgtgcgtacgaaccttgcgaccacatccgtgcagacgcttgccgcaatgctgaacgac
ccagcgccgaggatcgcgaagctcgtcgtgtccatcctcacgggcgtgtatccccttgtg
ttccgccagatgtttaccatacgctcacaacgacaagaatgggatattgttttgcagtgc
aagtcccgcatattggagttcgtgtggtccccgaccacccccagcggtgtaaagctagct
gccgtcaagtttatgcagaagattattcttctccagacacggggaaatccagacccgagg
cttcagaatagagacgacccgaacatctcgtcaatccctgccgatcaccccatactttcc
tcgcaaacgctggaacaggaagctaacaagctccttgaaggactggtgacgctgctttat
acgagcccgaacccggacatcatctcagcaattctcaacagttggtcaaatttggtcaaa
ctccgccccacctacgtacaactggtggtatcgtccttggcatcatggactccaaacacc
ttgagtggcctttctgcttcggccatcaagagcgtggagaagggcatccggatattattg
gttcacatatctcgaggtccacatggttctgcgtttggcgctcagatcagtgaggccctt
tcagtgcagggcactcgcatggagcgagcatccgcagaagaaaaggccaggaaagcggca
gcatcagcaactgccacggaggcggcaaagaagagaccaccctcagcaagcgtagaagca
ccttcagacgtcaagcgcgtgcggatggaagccgggccatctacttcgaactcaaactct
gccgcgttcttggctggctttgatttcaatacattgccaattgcacttatcattgagatc
atagtggccaaccttgccgcgttctcagagccaactttgacggaccttgtcaatgcctac
aggcaacgccaaggaacacctaccgtgccgactgcgagtacgcctgtcccagcagttcca
ccaatagcaccccgggcccatgacaagggcaaagccgcggaaatcacccctccgccagtc
aaacaggagccagtcgatcccttgaaaatggacatcgacgaagaagaaatggagtacgaa
ccggataaattaaaccaagagctgggtacagcggccgcgggcgaagacgcaggggctgag
gaaaccgcggaagcggatattagcttaaccctagaagacttccggctgcctccacccacg
gaccttcccgaggacgagcgaatagtgttgatgcgaaagtcgataacacgaatatctgac
ggcgcggatgagctcaagatcggcctggatgattcgtcggtgaagatggagacctccgcc
gtcgacatgtggatgcttctcgtcatacgcatgtttagccgtgtgtcgcatccccatagt
gagtcttctgggcgtgatgaagaagctggaaagcgacctcaagatcaggatgtcattacg
gcgaactacactcggcaggataagattcgacagagtctctgtgactatatcatggaagac
ttcgcaggaaggcgagcacgttttatagttgatatactgctgttacgccttgcgacgttt
tggatgaacgaagagtggtacaatgaccggataaatcggaacggagatttgaaccggcct
cccaactatgactcctggctaaatcaaattgtctcaacgtaccaaacgatccttgacaca
aaagctgacggcaggccagatagtaaagacaaggcattcgcccgatttttactggacctc
cctgccgttccaccggatgttttcgagctactgcgagacttatccgtcgaaacggataag
atgcatgtcggtttcacgagtctgcgtgaatttgtagtagagcggccatcactgagatct
gagtcactgcaagtccttctcgaactaaccacgcatccagagcctgtgactcgacgtgcc
gccatcaacacagtgaagcggtggattcccggcaatgacttcattgaaggcaaggtccgc
ggctttgcgcttcgaattttgcggcgtctgcaaaagcggcctgcgaaggatgaccgcaaa
ggcggcgaaactcatgtgaacggcgcgtcggaagatcaacccatggaagacggtcagttg
gccgcagatgacatcgaacagacaccttatctgccggaggagatggagcttccggcccag
aaggcgcatgttttgcaacatgtcgagctgctcttcgctctatccgtgaaggttcccgac
ttcttggacgaaatctttgaggcatacggacacatggactcgagcacgcaagaagttatc
cagaatctcattacgccgttggtgaagtcgctcggatcgagcaacggcaagctccttact
ctgatgagaacttgtcccgctggttcggagtcgttggcgcttcgtgtcttggcgatcttc
acggagtccggaaggccaagtgctcaacttgtggcactggtcaagggtcttattagtgaa
cgtgacctcgatgcacgctttcttattcctattattgcggaaatggataagtctgatatc
ctacgatatctaccacgcatcgtatctattctcaatggagaggccgagccgaagaacctg
gtccgctccgtgttcaactcggtggttaccacaccacctcaaacatttgggagtgtcacc
tcgaatttacctcgtgtcaggcagagtgagttgcttacgccagcggagttgatggttttg
ctgcatgagtcggagaaggaaatcggcctgaaggctgctatcgaagctatcaacatctgt
ttcgccatgaccgatgttttccgttctgagatcttggctgtcgtcatgcaacagattgtg
gacgagcctgtccttcctgtactctttttgagaaccgtcattcaagcggtgacaacttac
aaatccctggttggatttgtttcgacaacactactatcgcgtttgatcacgaagaagatc
tggcaaaatccgcacctgtgggaaggatttattcgttgcgccaaggctatcgctcctgct
agcttcggagcattattgcagctaccgaaggaacagctgcgagagttagttgacaaacag
cccagcctcaagtctgggctgcgtgactatgtcaccaaaaaggccggaaataaggccagg
gttgctgggttccttgacatatttggagaggatgatagtgctcaaaaccaaacacaagat
acgaccatggttgctgcccctgcatga
DBGET
integrated database retrieval system
